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IMGVR_UViG_3300011185_000278-3300011185-Ga0136597_100047912
Arc-VirIMGVR_UViG_3300011185_000278-3300011185-Ga0136597_100047912
Identity
- Kingdom:
- archaea
Quality
69.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-55
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2nsaA00 | 1.10.3120.10 | Mainly Alpha › Orthogonal Bundle › Trigger factor, domain 2 › Trigger factor, C-terminal domain | 0.69 | 48.0 | 3.28e-01 | 72.5% | 25.1% |
| 1c3cA01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.68 | 53.0 | 4.40e-01 | 86.3% | 76.9% |
| 3c8tA01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.66 | 51.0 | 4.17e-01 | 86.3% | 74.2% |
| 2e9fB01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.66 | 51.0 | 4.18e-01 | 86.3% | 77.1% |
| 1kxpD02 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.63 | 54.0 | 4.62e-01 | 100.0% | 80.7% |
| 6fakA02 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.63 | 50.0 | 4.54e-01 | 100.0% | 95.1% |
| 4uz0A00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.60 | 45.0 | 3.88e-01 | 84.3% | 51.7% |
| 2n7zA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.60 | 46.0 | 3.69e-01 | 86.3% | 47.2% |
| 5bpdD01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 44.0 | 3.95e-01 | 82.4% | 80.0% |
| 6i3gA03 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.59 | 40.0 | 2.60e-01 | 70.6% | 71.3% |
| 4irlB02 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.59 | 44.0 | 3.67e-01 | 80.4% | 44.1% |
| 5xnyA01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.58 | 43.0 | 3.58e-01 | 88.2% | 72.0% |
| 3n98A01 | 3.20.110.10 | Alpha Beta › Alpha-Beta Barrel › 7-stranded beta/alpha barrel › Glycoside hydrolase 38, N terminal domain | 0.58 | 48.0 | 2.83e-01 | 92.2% | 84.9% |
| 1gjsA00 | 1.10.8.40 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Albumin-binding domain | 0.56 | 42.0 | 4.00e-01 | 86.3% | 73.8% |
| 5axmB00 | 3.30.70.3000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) | 0.55 | 44.0 | 2.89e-01 | 90.2% | 35.1% |
| 3otdA00 | 3.30.70.3000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) | 0.55 | 43.0 | 2.88e-01 | 94.1% | 39.6% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4413951 | 131.1.1.24 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › tRNA_synt_2f | 0.69 | 61.0 | 3.86e-01 | 98.0% | 21.2% |
| 3465158 | 103.1.1.1 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA | 0.68 | 49.0 | 4.98e-01 | 78.4% | 90.0% |
| 3905947 | 110.1.1.11 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain › HSR | 0.67 | 48.0 | 3.82e-01 | 78.4% | 39.1% |
| 4062015 | 304.8.1.53 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › GlnD_5th | 0.66 | 53.0 | 3.79e-01 | 90.2% | 36.8% |
| 3912048 | 110.1.1.2 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain › CARD | 0.64 | 50.0 | 4.15e-01 | 84.3% | 50.0% |
| 3502278 | 110.1.1.2 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain › CARD | 0.62 | 48.0 | 4.02e-01 | 84.3% | 47.8% |
| 3907058 | 110.1.1.2 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain › CARD | 0.61 | 47.0 | 3.85e-01 | 86.3% | 45.0% |
| 3743285 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.61 | 46.0 | 3.01e-01 | 82.4% | 22.6% |
| 4176750 | 7582.1.1.2 ↗ | a/b three-layered sandwiches › Rossmann-like domain in CbiD › Rossmann-like domain in CbiD › Rossmann-like domain in CbiD › PF29030 | 0.61 | 50.0 | 3.46e-01 | 96.1% | 100.0% |
| 3931556 | 110.1.1.0 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain | 0.60 | 43.0 | 3.53e-01 | 76.5% | 42.0% |
| 3907719 | 110.1.1.2 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain › CARD | 0.59 | 46.0 | 3.80e-01 | 86.3% | 47.4% |
| 1544881 | 632.2.1.4 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains › GA-like | 0.58 | 49.0 | 4.83e-01 | 96.1% | 94.6% |
| 3892513 | 110.1.1.2 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain › CARD | 0.58 | 43.0 | 3.63e-01 | 84.3% | 44.2% |
| 4490022 | 3455.1.1.0 ↗ | alpha arrays › WY-domain in RXLR effectors › WY-domain in RXLR effectors › WY-domain in RXLR effectors | 0.56 | 42.0 | 3.53e-01 | 78.4% | 48.2% |
| 4900193 | 708.1.2.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like | 0.55 | 37.0 | 3.28e-01 | 74.5% | 47.4% |
| 137641 | 221.3.1.4 ↗ | a+b two layers › beta-Grasp › Immunoglobulin-binding domains › Immunoglobulin-binding domains › GA-like | 0.51 | 38.0 | 3.80e-01 | 90.2% | 82.1% |