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IMGVR_UViG_3300011438_000020-3300011438-Ga0137451_100004529
Arc-VirIMGVR_UViG_3300011438_000020-3300011438-Ga0137451_100004529
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-96
Domain cluster:
rep: rifoxyb1_full_scaffold_4_prodigal-single.1__X__X__00008__D11-120
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2i9xA00 | 3.30.1120.40 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Stage V sporulation protein G | 0.77 | 62.0 | 6.42e-01 | 98.9% | 93.0% |
| 6fndA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.68 | 39.0 | 3.13e-01 | 84.0% | 28.5% |
| 4g6tB00 | 6.10.20.120 | Special › Helix non-globular › Arc Repressor Mutant, subunit A › | 0.58 | 29.0 | 3.30e-01 | 73.4% | 60.6% |
| 2fqmA01 | 6.10.140.830 | Special › Helix non-globular › Helix Hairpins › | 0.57 | 27.0 | 3.69e-01 | 84.0% | 93.5% |
| 2py5A05 | 4.10.80.20 | Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › DNA polymerase; domain 5 | 0.56 | 20.0 | 3.36e-01 | 89.4% | 100.0% |
| 2ba1D01 | 3.30.230.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain | 0.53 | 46.0 | 3.55e-01 | 100.0% | 92.6% |
| 3u1nB01 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.51 | 43.0 | 3.06e-01 | 96.8% | 57.9% |
| 3sfvB01 | 3.30.450.390 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.51 | 36.0 | 3.21e-01 | 96.8% | 48.6% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4338613 | 4180.1.1.1 ↗ | a+b two layers › SpoVG-like › SpoVG-like › SpoVG-like › SpoVG | 0.79 | 64.0 | 6.73e-01 | 93.6% | 95.3% |
| 3666479 | 109.4.1.1156 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › E_motif | 0.60 | 28.0 | 2.35e-01 | 100.0% | 25.8% |
| 4944090 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.57 | 46.0 | 4.44e-01 | 100.0% | 75.5% |
| 4201723 | 327.16.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system | 0.56 | 31.0 | 3.77e-01 | 85.1% | 96.0% |
| 3503050 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.53 | 36.0 | 3.84e-01 | 97.9% | 81.2% |
| 4403478 | 298.1.1.8 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C | 0.51 | 43.0 | 3.30e-01 | 96.8% | 55.0% |