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IMGVR_UViG_3300011438_000020-3300011438-Ga0137451_100004536

Arc-Vir

IMGVR_UViG_3300011438_000020-3300011438-Ga0137451_100004536

Quality

74.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 18-100
PDB
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF04492.20 best Phage_rep_O 37.0 5.40e-09 96.4% 66.3%
PF13730.13 HTH_36 30.3 4.00e-07 68.7% 98.2%
CATH (100)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2nriB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.91 75.0 7.25e-01 100.0% 78.3%
4ev0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 65.0 6.72e-01 86.7% 81.8%
3dv8A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 65.0 6.68e-01 86.7% 80.8%
2l02A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 62.0 6.32e-01 88.0% 74.4%
5trdA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 65.0 6.49e-01 85.5% 76.2%
4rs8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 60.0 5.99e-01 86.7% 70.2%
4ijaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 61.0 6.88e-01 88.0% 96.8%
4kmfA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 60.0 6.91e-01 90.4% 98.4%
2qvoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 63.0 6.24e-01 90.4% 74.7%
3oopA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 63.0 5.26e-01 95.2% 48.5%
4wcgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 58.0 6.60e-01 88.0% 96.7%
3majA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 54.0 6.25e-01 86.7% 91.7%
6pcoC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 66.0 5.53e-01 91.6% 52.3%
5zyrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 61.0 4.86e-01 95.2% 41.7%
3k69A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 59.0 4.74e-01 88.0% 40.7%
1qbjC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 60.0 6.66e-01 88.0% 95.5%
2hr3D02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 58.0 6.64e-01 90.4% 98.4%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 63.0 5.77e-01 90.4% 63.5%
5jbrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 68.0 6.72e-01 96.4% 83.7%
2pjpA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 54.0 6.24e-01 88.0% 93.3%
2dk5A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 62.0 6.81e-01 86.7% 98.5%
2xubA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 69.0 7.13e-01 100.0% 94.9%
4g9yA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 63.0 5.26e-01 91.6% 49.3%
1r1uB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 61.0 5.84e-01 94.0% 68.8%
3cjnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 64.0 5.19e-01 95.2% 46.6%
3b02A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 64.0 6.40e-01 85.5% 80.0%
3g3zA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 59.0 6.67e-01 91.6% 98.4%
2v9vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 56.0 6.47e-01 85.5% 98.3%
1ft9A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 65.0 6.70e-01 86.7% 87.3%
4em2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 65.0 5.24e-01 95.2% 46.7%
3e6mA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 60.0 4.89e-01 91.6% 43.8%
3cuqA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 60.0 6.13e-01 94.0% 80.0%
7l1iA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 63.0 5.07e-01 94.0% 44.4%
4chuA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 61.0 5.19e-01 90.4% 51.6%
3r4kB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 56.0 6.29e-01 88.0% 95.2%
1p6rA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 61.0 6.20e-01 94.0% 81.7%
3l09A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 61.0 6.13e-01 86.7% 79.8%
8agaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 61.0 5.27e-01 91.6% 53.2%
2mlgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 58.0 6.03e-01 85.5% 81.8%
2xkoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 64.0 6.15e-01 86.7% 74.5%
1ku9B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 67.0 6.63e-01 97.6% 85.1%
3gw2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 59.0 5.67e-01 94.0% 68.8%
1s3jA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 58.0 6.43e-01 88.0% 98.4%
4hw0C00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 55.0 5.27e-01 86.7% 63.4%
2obpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 62.0 6.34e-01 90.4% 85.2%
2jt1A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 62.0 6.59e-01 90.4% 97.2%
3bpvA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 62.0 5.17e-01 91.6% 50.4%
2p4wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 63.0 5.88e-01 94.0% 68.9%
4b8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 61.0 5.07e-01 92.8% 48.6%
3bj6B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 64.0 5.19e-01 96.4% 47.7%
2oqgB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 59.0 5.35e-01 94.0% 60.2%
1zarA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 62.0 6.11e-01 98.8% 78.7%
3e97A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 61.0 6.31e-01 85.5% 87.2%
2fbhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 63.0 5.23e-01 96.4% 51.1%
1lj9B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 65.0 5.30e-01 96.4% 50.7%
6kf9G01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 67.0 6.75e-01 100.0% 93.9%
4nb5B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 66.0 6.55e-01 96.4% 87.1%
2nyxB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 64.0 5.27e-01 97.6% 50.7%
5f7qC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 61.0 6.58e-01 90.4% 97.1%
3lmmB05 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 55.0 6.17e-01 85.5% 100.0%
2h09A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 56.0 6.04e-01 90.4% 88.7%
5eriA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 63.0 5.06e-01 96.4% 47.1%
2mh2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 57.0 6.36e-01 85.5% 100.0%
3pqkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 60.0 5.62e-01 95.2% 68.7%
2ethA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 65.0 5.41e-01 100.0% 53.9%
3bwgB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 58.0 6.25e-01 86.7% 97.1%
3cuoD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 59.0 5.64e-01 95.2% 72.3%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 54.0 6.14e-01 88.0% 98.4%
3edpA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 54.0 5.64e-01 88.0% 81.6%
1z05A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 59.0 6.35e-01 90.4% 95.8%
3broD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 60.0 5.08e-01 97.6% 53.0%
5dymA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 59.0 5.59e-01 86.7% 71.9%
2r3sB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 52.0 5.34e-01 90.4% 75.3%
3l9fA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 60.0 5.88e-01 86.7% 79.8%
5h20A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 60.0 5.54e-01 90.4% 68.9%
3m8eA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 61.0 5.74e-01 98.8% 73.3%
2b0lC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 62.0 5.97e-01 98.8% 80.9%
3f8mA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 52.0 5.78e-01 86.7% 93.8%
2hs5A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 53.0 5.82e-01 88.0% 95.5%
3mczA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 51.0 5.15e-01 91.6% 73.2%
4a6dA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 55.0 5.32e-01 90.4% 71.3%
2xzn800 3.30.63.20 Alpha Beta › 2-Layer Sandwich › Guanylate Kinase phosphate binding domain › 0.73 51.0 4.90e-01 86.7% 64.5%
6abqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 58.0 5.29e-01 88.0% 66.0%
2dqlA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 59.0 5.24e-01 88.0% 62.6%
1hw1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 56.0 5.88e-01 91.6% 90.7%
4p9fA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 51.0 5.61e-01 86.7% 92.5%
3dp7B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 52.0 5.03e-01 90.4% 67.7%
3r0aA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 66.0 5.76e-01 100.0% 75.8%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 55.0 5.07e-01 85.5% 64.8%
1hkqA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 63.0 5.52e-01 100.0% 82.4%
4g6qA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 60.0 5.90e-01 100.0% 88.5%
4h0eA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 53.0 5.76e-01 88.0% 95.7%
3e1sA01 1.10.10.2220 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.70 62.0 5.98e-01 98.8% 97.9%
1ulyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 60.0 5.88e-01 100.0% 86.5%
2ip2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 51.0 5.11e-01 92.8% 76.2%
3dptB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 53.0 5.71e-01 86.7% 100.0%
2v79A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 61.0 5.49e-01 100.0% 71.3%
3c7jA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 52.0 5.04e-01 86.7% 73.6%
1bm9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 57.0 5.05e-01 95.2% 70.8%
4esbA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 51.0 4.81e-01 85.5% 68.9%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3979451 101.1.2.241 alpha arrays › HTH › HTH › winged helix domain › Phage_rep_O 0.94 82.0 7.48e-01 100.0% 72.4%
3964741 101.1.2.368 alpha arrays › HTH › HTH › winged helix domain › HTH_36 0.91 81.0 7.51e-01 100.0% 78.0%
1175670 101.1.2.142 alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 0.88 65.0 6.61e-01 86.7% 78.8%
5024958 101.1.2.142 alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 0.88 68.0 6.60e-01 90.4% 74.4%
4546696 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.86 67.0 6.52e-01 90.4% 75.6%
3741612 101.1.2.90 alpha arrays › HTH › HTH › winged helix domain › HTH_9 0.85 73.0 7.15e-01 100.0% 84.4%
4976773 101.1.2.275 alpha arrays › HTH › HTH › winged helix domain › DUF1495 0.85 64.0 5.80e-01 86.7% 60.0%
4984018 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.85 63.0 6.83e-01 88.0% 91.4%
4963008 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.85 62.0 6.01e-01 88.0% 70.0%
4367442 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.84 64.0 5.28e-01 88.0% 47.1%
5062630 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.84 64.0 6.60e-01 92.8% 83.7%
5056655 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.83 63.0 6.46e-01 92.8% 82.5%
5080847 101.1.2.90 alpha arrays › HTH › HTH › winged helix domain › HTH_9 0.83 65.0 7.11e-01 90.4% 97.1%
5032275 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.83 69.0 6.39e-01 95.2% 72.0%
5035395 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.83 70.0 5.45e-01 100.0% 44.1%
4946114 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.83 62.0 5.72e-01 86.7% 62.5%
4971941 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.83 61.0 6.41e-01 88.0% 85.3%
4978419 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.83 61.0 6.43e-01 88.0% 85.3%
5016950 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.83 66.0 6.41e-01 92.8% 77.8%
3483777 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 59.0 6.22e-01 86.7% 82.7%
4097415 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.82 63.0 6.83e-01 88.0% 94.3%
3946945 101.1.2.274 alpha arrays › HTH › HTH › winged helix domain › SgrR_N 0.82 61.0 4.30e-01 92.8% 27.8%
4144039 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 63.0 5.65e-01 88.0% 59.1%
4976847 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.82 69.0 6.19e-01 97.6% 67.3%
None 0.82 62.0 6.66e-01 88.0% 94.3%
4547759 101.1.2.21 alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress 0.82 62.0 6.77e-01 88.0% 94.3%
3958859 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 64.0 6.54e-01 88.0% 85.0%
5026732 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.81 70.0 6.64e-01 94.0% 78.9%
3285394 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.81 63.0 6.43e-01 88.0% 83.7%
3602531 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.81 64.0 5.81e-01 92.8% 63.6%
5024784 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.81 60.0 6.10e-01 86.7% 80.0%
5048088 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.81 69.0 6.07e-01 98.8% 64.4%
4998832 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.81 67.0 6.07e-01 100.0% 67.3%
4971744 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.81 60.0 6.01e-01 88.0% 76.5%
4979485 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.81 60.0 6.28e-01 85.5% 85.3%
4562581 101.1.2.110 alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.80 61.0 6.54e-01 88.0% 94.3%
4945995 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 62.0 6.14e-01 90.4% 77.6%
3286028 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.80 62.0 6.48e-01 88.0% 89.3%
4988497 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.80 64.0 5.01e-01 94.0% 42.4%
4928953 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.80 65.0 6.52e-01 98.8% 84.7%
4965874 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.80 68.0 5.69e-01 96.4% 56.0%
3289766 101.1.2.110 alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.80 63.0 6.61e-01 90.4% 92.0%
5078403 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.80 63.0 6.65e-01 94.0% 93.3%
4983914 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.80 60.0 6.11e-01 86.7% 81.2%
3602589 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.80 62.0 5.85e-01 92.8% 69.0%
4936335 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.79 58.0 5.28e-01 88.0% 58.2%
5073878 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 59.0 6.34e-01 85.5% 92.9%
4965203 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.79 69.0 6.22e-01 98.8% 71.3%
5033035 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 67.0 5.86e-01 96.4% 63.6%
5028348 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.79 66.0 4.93e-01 98.8% 38.5%
4984935 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 63.0 4.54e-01 96.4% 32.6%
4948474 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 62.0 6.71e-01 90.4% 98.6%
5069274 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.78 67.0 5.91e-01 96.4% 65.2%
3283702 101.1.2.6 alpha arrays › HTH › HTH › winged helix domain › GntR 0.78 57.0 5.82e-01 88.0% 78.8%
5025618 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 67.0 6.01e-01 96.4% 68.2%
4648749 101.1.2.274 alpha arrays › HTH › HTH › winged helix domain › SgrR_N 0.78 61.0 5.37e-01 86.7% 57.5%
4961529 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.78 62.0 5.92e-01 92.8% 73.7%
5016748 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.78 67.0 5.82e-01 97.6% 63.3%
4950547 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.78 62.0 5.91e-01 90.4% 73.7%
4983992 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.78 62.0 5.01e-01 94.0% 45.8%
4655417 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 64.0 5.67e-01 88.0% 63.5%
3278012 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 60.0 6.50e-01 92.8% 97.1%
5033290 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.78 64.0 5.65e-01 97.6% 61.7%
4369479 101.1.2.274 alpha arrays › HTH › HTH › winged helix domain › SgrR_N 0.77 61.0 5.41e-01 90.4% 60.0%
3942897 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 59.0 6.03e-01 85.5% 82.5%
4930777 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 64.0 6.22e-01 88.0% 80.0%
4971297 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 60.0 5.52e-01 94.0% 64.8%
4979194 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 63.0 6.05e-01 95.2% 76.8%
5022036 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 65.0 5.47e-01 96.4% 55.6%
4980377 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.77 61.0 4.48e-01 94.0% 33.3%
4979815 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.77 61.0 5.97e-01 94.0% 77.8%
3281274 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.77 60.0 6.13e-01 90.4% 85.0%
4974447 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 65.0 5.68e-01 96.4% 62.5%
4967969 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.77 62.0 4.86e-01 94.0% 43.0%
5070036 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 63.0 5.08e-01 86.7% 52.0%
5012975 101.1.2.110 alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.77 62.0 5.68e-01 92.8% 67.6%
5017942 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.77 61.0 5.69e-01 94.0% 70.0%
3980036 101.1.2.372 alpha arrays › HTH › HTH › winged helix domain › HTH_64 0.76 56.0 5.91e-01 86.7% 86.7%
3970097 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 55.0 5.93e-01 88.0% 88.6%
None 0.76 64.0 6.27e-01 98.8% 84.4%
None 0.76 64.0 6.23e-01 98.8% 84.4%
4947441 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 61.0 6.09e-01 97.6% 83.5%
4964842 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.75 60.0 5.87e-01 92.8% 77.8%
3989015 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 67.0 6.13e-01 100.0% 76.2%
4622104 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 62.0 6.06e-01 90.4% 82.2%
4025539 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.75 57.0 5.99e-01 90.4% 90.7%
4985036 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.74 66.0 5.15e-01 100.0% 47.6%
4645692 101.1.2.372 alpha arrays › HTH › HTH › winged helix domain › HTH_64 0.74 62.0 6.52e-01 90.4% 100.0%
4965714 101.1.2.110 alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.74 58.0 5.66e-01 92.8% 77.8%
5073281 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 60.0 6.22e-01 94.0% 100.0%
3614124 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 54.0 5.23e-01 90.4% 69.5%
5059033 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.73 65.0 6.06e-01 100.0% 92.4%
5035027 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.72 67.0 5.85e-01 100.0% 73.1%
4978090 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.72 62.0 4.53e-01 94.0% 35.8%
5063201 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 65.0 5.42e-01 100.0% 66.7%
4957079 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.71 57.0 5.54e-01 92.8% 78.9%
5047052 101.1.2.673 alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N 0.71 63.0 4.91e-01 95.2% 72.6%
5041543 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.71 65.0 5.41e-01 100.0% 60.7%
5080615 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.70 63.0 5.04e-01 100.0% 58.8%
3977793 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 61.0 5.88e-01 98.8% 85.1%
D2 high residues 167-258
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4alyB00 1.10.3160.10 Mainly Alpha › Orthogonal Bundle › Bbcrasp-1 › Bbcrasp-1 0.64 57.0 4.54e-01 100.0% 69.5%
4m70I00 1.20.5.4130 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.61 47.0 4.46e-01 82.6% 78.7%
2i5uA00 1.10.10.630 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DnaD domain-like 0.59 45.0 4.77e-01 89.1% 100.0%
3pqaB01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.57 46.0 3.30e-01 88.0% 65.8%
1kxpD02 1.10.246.10 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.54 36.0 3.74e-01 83.7% 71.6%
4ocqA01 3.90.1200.10 Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.53 44.0 3.33e-01 92.4% 80.4%
1orjD00 1.20.120.340 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS 0.53 40.0 3.64e-01 100.0% 59.2%
1rp3A01 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.53 36.0 3.77e-01 79.3% 76.5%
5l3wA01 1.20.120.140 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain 0.53 36.0 3.80e-01 77.2% 78.6%
1ez0B01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.52 40.0 2.90e-01 85.9% 75.3%
1kxpD04 1.10.246.10 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.51 36.0 3.85e-01 79.3% 87.0%
3b9qA01 1.20.120.140 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain 0.51 36.0 3.70e-01 87.0% 75.3%
1ysyA00 1.10.8.370 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › nsp7 replicase 0.50 35.0 3.62e-01 82.6% 78.8%
2xgcA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.50 39.0 3.56e-01 84.8% 65.6%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3704822 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.61 54.0 4.50e-01 98.9% 57.7%
3705705 103.4.1.2 alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › TFIIS_M 0.61 54.0 5.03e-01 98.9% 81.7%
3672789 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.61 50.0 5.03e-01 97.8% 88.4%
4990947 7014.1.1.2 alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › TauE 0.58 39.0 3.65e-01 98.9% 54.8%
3325595 632.1.1.3 alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › Alpha-mann_mid 0.58 39.0 3.71e-01 70.7% 83.5%
3805676 1128.1.1.13 alpha bundles › LYR protein › LYR protein › LYR protein › PF30094 0.57 40.0 4.11e-01 73.9% 85.6%
3586071 103.1.1.0 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.56 49.0 4.82e-01 100.0% 100.0%
5025162 5050.1.1.0 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.56 41.0 3.44e-01 80.4% 55.4%
4358185 2498.1.1.22 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YbeY 0.55 44.0 3.97e-01 90.2% 80.7%
2055305 7524.1.1.1 a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Aldedh 0.55 43.0 3.22e-01 85.9% 72.7%
3822810 1128.1.1.13 alpha bundles › LYR protein › LYR protein › LYR protein › PF30094 0.55 41.0 4.00e-01 79.3% 73.0%
3946182 103.2.1.2 alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.54 36.0 3.64e-01 80.4% 67.8%
3930155 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 42.0 3.99e-01 83.7% 73.6%
3469007 142.1.1.0 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.52 38.0 3.91e-01 76.1% 83.5%
5057879 5054.1.1.8 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 0.52 29.0 2.65e-01 72.8% 39.2%
3439339 611.8.1.2 alpha bundles › N-cbl like › C-terminal domain of E3 ubiquitin-protein ligase ARIH1 › C-terminal domain of E3 ubiquitin-protein ligase ARIH1 › Rx_N 0.52 41.0 3.68e-01 90.2% 100.0%
5039779 4323.1.1.0 alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C 0.51 38.0 3.48e-01 80.4% 76.9%
3632799 632.1.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain 0.51 37.0 3.26e-01 75.0% 77.8%
5044962 632.22.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.50 34.0 3.44e-01 70.7% 84.2%
3950589 601.18.1.5 alpha bundles › Four-helical up-and-down bundle › Oxygen-evolving enhancer protein 3 › Oxygen-evolving enhancer protein 3 › DUF4395 0.50 37.0 3.65e-01 78.3% 91.0%
D3 high residues 264-334
PDB
Domain cluster: representative
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ekgA00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.69 59.0 5.09e-01 100.0% 84.9%
3vp7A00 1.10.418.40 Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Autophagy protein 6/Beclin 1 0.66 57.0 4.43e-01 98.6% 44.0%
4jpdA00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.66 56.0 4.98e-01 100.0% 90.8%
3khnB00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.65 49.0 3.84e-01 83.1% 100.0%
4hs5A00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.64 55.0 4.93e-01 100.0% 89.5%
2zovA00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.64 47.0 3.70e-01 81.7% 93.4%
2czrA01 3.40.1350.70 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › TBP-interacting protein, N-terminal domain 0.62 50.0 4.38e-01 88.7% 86.8%
1z1bA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.60 39.0 4.16e-01 83.1% 80.7%
1nj1A02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.59 45.0 4.02e-01 84.5% 75.0%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.58 41.0 3.24e-01 76.1% 40.3%
2jh3A03 3.30.1360.190 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.57 44.0 3.86e-01 85.9% 83.0%
4fr9A00 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 38.0 3.06e-01 70.4% 55.3%
5mu3B00 3.40.50.12050 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.56 48.0 3.78e-01 100.0% 52.1%
1u02A02 3.30.70.1020 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Trehalose-6-phosphate phosphatase related protein; domain 2 0.56 44.0 4.34e-01 87.3% 94.7%
2nvnA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.55 41.0 3.50e-01 80.3% 60.0%
3p8aA02 2.60.40.4320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 37.0 3.54e-01 81.7% 55.6%
5vipB01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.55 46.0 3.34e-01 97.2% 91.1%
4j4hA01 3.40.50.12150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 45.0 3.77e-01 95.8% 100.0%
2x4lA02 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.54 45.0 3.68e-01 98.6% 100.0%
3upsA00 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.54 37.0 3.31e-01 71.8% 50.9%
1omoA01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.54 36.0 2.96e-01 70.4% 68.5%
1i3pA00 2.60.250.10 Mainly Beta › Sandwich › Baculovirus p35 › Baculovirus p35 0.53 44.0 3.05e-01 95.8% 27.4%
4whiA00 2.40.128.600 Mainly Beta › Beta Barrel › Lipocalin › 0.53 43.0 3.90e-01 91.5% 76.5%
6p8uA01 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.53 44.0 3.59e-01 97.2% 82.6%
4uoiC00 3.30.160.890 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Hepatitis C virus envelope glycoprotein E1, chain C 0.52 30.0 3.43e-01 91.5% 78.4%
5gaeG01 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.52 40.0 3.92e-01 85.9% 91.4%
2e1bA02 3.30.980.10 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 0.52 46.0 3.78e-01 98.6% 96.9%
6bhdA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.52 38.0 4.02e-01 81.7% 87.3%
2ehbD00 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.52 44.0 3.77e-01 100.0% 88.9%
2vnuD04 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 40.0 3.88e-01 85.9% 93.7%
3ottB02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 37.0 2.42e-01 76.1% 25.0%
4zgfA00 2.40.128.270 Mainly Beta › Beta Barrel › Lipocalin › 0.51 37.0 3.11e-01 81.7% 97.2%
6jpaE00 1.20.140.150 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › 0.51 42.0 3.28e-01 95.8% 61.5%
1u7bA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.51 40.0 2.75e-01 85.9% 76.9%
3h1tA01 3.90.1570.30 Alpha Beta › Alpha-Beta Complex › tt1808, chain A › 0.51 41.0 3.50e-01 98.6% 94.2%
ECOD (34)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4011259 241.2.1.0 a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like 0.72 62.0 5.30e-01 98.6% 95.0%
4463837 375.1.1.26 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.70 43.0 3.70e-01 78.9% 41.9%
3227319 241.2.1.1 a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay 0.69 60.0 5.18e-01 100.0% 89.6%
4073557 241.2.1.1 a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay 0.69 60.0 5.39e-01 98.6% 93.0%
3997090 241.2.1.1 a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay 0.69 60.0 5.17e-01 100.0% 88.7%
5033222 375.1.1.26 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.68 41.0 3.61e-01 80.3% 41.9%
4479376 241.2.1.1 a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay 0.68 57.0 5.00e-01 98.6% 86.1%
4928574 241.11.1.0 a+b two layers › Type III secretory system chaperone-like › YjbR-like › YjbR-like 0.68 54.0 5.08e-01 90.1% 97.7%
3199325 241.1.1.11 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › Med14 0.66 50.0 3.84e-01 84.5% 46.1%
3600254 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.64 51.0 3.73e-01 84.5% 97.3%
5079015 2484.1.1.71 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RACo_C_ter 0.61 40.0 2.79e-01 71.8% 19.2%
3928962 4161.1.1.2 beta complex topology › MOSC N-terminal domain-like › MOSC N-terminal domain-like › MOSC N-terminal domain-like › MOSC_N 0.61 45.0 3.59e-01 80.3% 55.3%
2075043 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.60 45.0 4.47e-01 83.1% 100.0%
3618540 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.60 41.0 4.12e-01 71.8% 68.0%
3365178 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.60 40.0 4.20e-01 84.5% 76.9%
1921567 223.1.1.21 a+b three layers › Profilin-like › sensor domains › sensor domains › HODM_asu-like 0.59 47.0 3.13e-01 91.5% 20.1%
3701985 2004.1.1.427 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RHSP, RHS_N 0.59 41.0 2.51e-01 71.8% 16.4%
4943886 230.1.1.0 a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like 0.58 40.0 3.08e-01 87.3% 31.9%
3556708 247.1.1.38 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › CPSF73-100_C 0.58 44.0 4.35e-01 83.1% 90.7%
4944313 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.58 39.0 3.10e-01 90.1% 36.3%
5047657 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.57 40.0 4.42e-01 70.4% 94.5%
4062573 7502.1.1.0 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS 0.57 43.0 3.90e-01 83.1% 79.0%
3281830 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.56 40.0 3.23e-01 74.6% 54.8%
3659833 2007.5.1.17 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › PC-Esterase 0.56 41.0 2.92e-01 81.7% 59.6%
3988984 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.55 47.0 3.71e-01 98.6% 87.5%
4964955 223.2.1.63 a+b three layers › Profilin-like › profilin-like › profilin-like › DUF7522 0.55 39.0 3.21e-01 74.6% 54.3%
3511590 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 39.0 3.46e-01 74.6% 69.5%
3216246 2004.1.1.230 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Tsr1_G-like 0.55 41.0 3.24e-01 85.9% 84.6%
3260335 5.1.4.14 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N 0.54 38.0 2.41e-01 74.6% 22.2%
3786078 109.4.1.1764 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF28917 0.53 41.0 2.49e-01 84.5% 18.4%
5049758 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.51 45.0 3.61e-01 100.0% 88.3%
4994522 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.51 46.0 3.49e-01 100.0% 43.8%
4238913 1046.1.1.1 alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 0.51 44.0 3.34e-01 100.0% 66.7%
5049690 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.50 42.0 3.41e-01 94.4% 94.3%