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IMGVR_UViG_3300011438_000020-3300011438-Ga0137451_100004555

Arc-Vir

IMGVR_UViG_3300011438_000020-3300011438-Ga0137451_100004555

Quality

90.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 54-153
PDB
CATH (50)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1z5hA01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.65 44.0 3.74e-01 100.0% 41.2%
6cl5A01 2.60.40.3940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.65 56.0 5.62e-01 100.0% 92.2%
6ea2A01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.64 48.0 3.93e-01 100.0% 42.8%
4mtmA01 2.60.40.3940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.64 51.0 5.22e-01 100.0% 90.6%
5zi7A01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.63 48.0 3.91e-01 100.0% 43.2%
3v10A02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.63 56.0 4.91e-01 100.0% 66.4%
2vm9A02 2.60.40.2080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.63 54.0 5.51e-01 93.0% 95.9%
2pmwB02 2.60.120.690 Mainly Beta › Sandwich › Jelly Rolls › Proprotein convertase subtilisin/kexin type 9 0.62 44.0 3.51e-01 88.0% 36.1%
1h6eA02 2.60.40.1170 Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B 0.61 46.0 4.52e-01 100.0% 74.3%
1f15B00 2.60.120.530 Mainly Beta › Sandwich › Jelly Rolls › Cucumovirus coat protein, subunit A 0.60 53.0 4.27e-01 96.0% 76.3%
3zn6A02 2.60.40.3410 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 46.0 4.86e-01 81.0% 100.0%
1f8vC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.58 51.0 3.69e-01 99.0% 79.4%
4kx7A01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.58 48.0 3.80e-01 100.0% 42.0%
2p6cA00 2.60.120.460 Mainly Beta › Sandwich › Jelly Rolls › YjbQ-like 0.58 46.0 4.17e-01 86.0% 98.5%
3ciaA01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.58 45.0 3.78e-01 100.0% 46.7%
1vphB00 2.60.120.460 Mainly Beta › Sandwich › Jelly Rolls › YjbQ-like 0.57 46.0 4.19e-01 88.0% 97.1%
2gu9A01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.56 43.0 4.35e-01 100.0% 81.6%
4indA03 2.60.120.1330 Mainly Beta › Sandwich › Jelly Rolls › 0.56 46.0 4.32e-01 88.0% 92.4%
4d8mA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 49.0 4.12e-01 98.0% 97.6%
2y7lA02 2.60.40.2430 Mainly Beta › Sandwich › Immunoglobulin-like › Agglutinin-like protein, N-terminal domain, N2 subdomain 0.55 46.0 4.09e-01 100.0% 61.6%
2hyxA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.55 40.0 3.71e-01 100.0% 59.5%
4llfD01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.55 48.0 4.03e-01 100.0% 96.1%
2vbkA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.55 49.0 3.10e-01 99.0% 23.9%
2oa2A01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 43.0 4.11e-01 100.0% 71.1%
4i0wD02 2.60.120.1290 Mainly Beta › Sandwich › Jelly Rolls › 0.55 48.0 4.46e-01 100.0% 77.7%
1im3D00 2.60.40.1200 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 42.0 4.30e-01 85.0% 87.4%
4en2A02 2.60.40.1170 Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B 0.54 40.0 4.01e-01 100.0% 76.0%
1f97A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 43.0 4.31e-01 99.0% 85.3%
3ebrA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 40.0 3.56e-01 100.0% 53.8%
1jv2A04 2.60.40.1530 Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 4 0.53 48.0 3.87e-01 100.0% 66.5%
1te5A00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.53 40.0 2.99e-01 82.0% 32.0%
3ibmB00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 41.0 3.69e-01 100.0% 58.9%
2qf4A01 2.40.10.340 Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 1 0.52 37.0 4.05e-01 98.0% 93.7%
3byqA00 3.30.1330.110 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › BB2672 0.52 46.0 3.78e-01 100.0% 82.2%
4ag4A02 2.60.120.1190 Mainly Beta › Sandwich › Jelly Rolls › 0.52 45.0 3.74e-01 100.0% 53.6%
1vrbD01 2.60.120.650 Mainly Beta › Sandwich › Jelly Rolls › Cupin 0.52 46.0 3.62e-01 100.0% 62.7%
4lr4A02 2.60.120.1430 Mainly Beta › Sandwich › Jelly Rolls › 0.52 45.0 3.88e-01 100.0% 59.5%
2zbvC02 2.40.30.90 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like 0.52 44.0 4.44e-01 97.0% 95.1%
2fctB00 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.52 45.0 3.29e-01 100.0% 63.2%
1nkgA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 44.0 3.77e-01 98.0% 100.0%
7vbqA01 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.52 45.0 3.43e-01 100.0% 57.6%
3kt7A01 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.51 45.0 3.45e-01 100.0% 57.7%
2pn5A08 2.60.120.1540 Mainly Beta › Sandwich › Jelly Rolls › 0.51 43.0 4.17e-01 94.0% 93.7%
1pm4A00 2.60.120.510 Mainly Beta › Sandwich › Jelly Rolls › Mitogen Ypm 0.51 44.0 4.21e-01 96.0% 88.0%
3l81A02 2.60.40.1170 Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B 0.51 38.0 3.74e-01 100.0% 72.7%
4y5tB00 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.51 44.0 3.27e-01 100.0% 52.3%
3kt4A02 3.60.130.20 Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Oxoglutarate/iron-dependent oxygenase, C-terminal degradation domain 0.51 44.0 3.19e-01 100.0% 59.2%
1cx1A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 44.0 3.86e-01 98.0% 98.0%
1w9yA00 2.60.120.330 Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain 0.50 45.0 3.24e-01 100.0% 54.0%
4naoA00 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.50 44.0 3.26e-01 100.0% 52.5%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3744032 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.68 55.0 4.83e-01 86.0% 80.0%
184925 11.21.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein › Tailspike_C 0.65 46.0 5.22e-01 100.0% 100.0%
2448383 4182.1.1.3 beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like › Gp53-like_C 0.65 56.0 5.25e-01 100.0% 77.0%
2512673 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 55.0 5.17e-01 100.0% 88.1%
3927764 11.1.5.7 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adap_comp_sub 0.62 46.0 4.51e-01 100.0% 70.9%
4960841 4081.1.1.0 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.62 46.0 3.83e-01 100.0% 44.4%
3414624 4081.1.1.7 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Ribophorin_I 0.61 48.0 3.91e-01 100.0% 46.1%
5038393 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.61 49.0 4.43e-01 86.0% 88.1%
3792868 11.1.5.97 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › DUF7808 0.60 48.0 4.48e-01 86.0% 87.9%
3938952 10.32.1.233 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GBD_Hemicentin 0.60 45.0 4.60e-01 100.0% 83.2%
4926998 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 44.0 4.22e-01 100.0% 65.8%
3222667 387.1.1.69 few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related › DUF7808 0.60 48.0 4.29e-01 86.0% 83.6%
1005556 10.2.1.65 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › VP17_central_barrel 0.60 46.0 4.88e-01 82.0% 100.0%
5056360 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.60 46.0 4.78e-01 83.0% 98.9%
4121516 4182.1.1.2 beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like › H_lectin 0.59 54.0 5.33e-01 100.0% 99.0%
5030335 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 41.0 4.50e-01 99.0% 92.5%
5064648 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.58 46.0 4.68e-01 86.0% 97.0%
5043435 4081.1.1.0 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.58 45.0 3.83e-01 100.0% 49.1%
3220690 10.4.1.19 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › Glycoprotein 0.58 45.0 4.37e-01 83.0% 91.8%
4944012 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.58 44.0 4.31e-01 100.0% 74.5%
4983953 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.58 49.0 4.17e-01 94.0% 97.0%
4015802 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.57 42.0 4.14e-01 100.0% 70.9%
3238330 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 41.0 3.25e-01 100.0% 34.5%
5041423 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.57 43.0 3.94e-01 100.0% 60.0%
3920811 12.5.1.1 beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5 0.57 48.0 4.21e-01 98.0% 61.3%
4651258 11.1.5.107 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Candida_ALS_N 0.56 47.0 4.15e-01 100.0% 62.7%
3989692 4081.1.1.12 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › DUF2207 0.56 46.0 3.72e-01 100.0% 44.8%
3788235 11.1.5.7 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adap_comp_sub 0.55 41.0 4.02e-01 100.0% 71.8%
5002193 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.55 47.0 4.55e-01 94.0% 100.0%
3497288 12.5.1.1 beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5 0.55 48.0 4.20e-01 98.0% 66.5%
4024342 11.1.5.7 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adap_comp_sub 0.55 40.0 3.65e-01 100.0% 55.7%
3784415 11.1.1.151 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Candida_ALS_N 0.54 46.0 4.01e-01 100.0% 60.6%
5011401 1.1.4.1 beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C 0.54 47.0 4.72e-01 99.0% 95.2%
5049603 1.1.4.1 beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C 0.54 46.0 4.58e-01 96.0% 99.0%
4945417 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 42.0 3.80e-01 100.0% 61.5%
3489835 11.1.5.94 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Gpi16 0.54 46.0 3.80e-01 100.0% 51.4%
3747178 11.1.1.969 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_TRAPPC10 0.54 45.0 4.10e-01 100.0% 68.1%
3611563 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.54 46.0 3.85e-01 96.0% 70.0%
3571103 4081.1.1.8 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT_2 0.54 47.0 3.73e-01 100.0% 46.0%
5007278 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.54 45.0 4.21e-01 100.0% 73.1%
4965211 10.12.1.39 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.53 43.0 4.12e-01 100.0% 75.7%
3418365 4081.1.1.7 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Ribophorin_I 0.53 47.0 3.12e-01 100.0% 24.1%
5077448 10.1.2.183 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PPC 0.53 43.0 4.27e-01 100.0% 84.8%
5020593 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.53 47.0 4.01e-01 99.0% 74.5%
5051355 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.53 45.0 4.20e-01 100.0% 74.4%
None 0.52 47.0 2.80e-01 100.0% 16.3%
3872029 10.4.1.0 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.52 44.0 4.36e-01 94.0% 97.1%
3230488 10.4.1.19 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › Glycoprotein 0.52 41.0 4.10e-01 85.0% 91.4%
4633150 10.12.1.25 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PhyH 0.52 46.0 3.32e-01 100.0% 52.3%
4585394 10.12.1.121 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › HgmA_C, HgmA_N 0.52 41.0 2.75e-01 100.0% 20.2%
4052457 10.12.1.61 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › HgmA_N 0.52 39.0 2.96e-01 100.0% 32.0%
3837954 1.1.7.87 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 0.52 44.0 4.48e-01 96.0% 98.9%
3223001 10.4.1.9 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB_2 0.52 41.0 3.95e-01 86.0% 93.0%
4996262 1.1.4.1 beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C 0.52 44.0 4.41e-01 99.0% 95.2%
3276036 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.51 44.0 3.35e-01 98.0% 54.1%
3935528 10.4.1.1 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.51 38.0 3.23e-01 100.0% 46.3%
5003083 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 44.0 3.79e-01 99.0% 75.8%
1411392 10.12.1.44 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Ofd1_CTDD 0.50 43.0 3.17e-01 100.0% 53.1%
3245736 10.4.1.19 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › Glycoprotein 0.50 44.0 4.41e-01 100.0% 93.3%
4011072 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 40.0 3.43e-01 100.0% 53.8%
3219446 10.4.1.9 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB_2 0.50 39.0 3.85e-01 86.0% 91.8%
3246368 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.50 43.0 3.69e-01 100.0% 76.6%