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IMGVR_UViG_3300011438_000020-3300011438-Ga0137451_100004563

Arc-Vir

IMGVR_UViG_3300011438_000020-3300011438-Ga0137451_100004563

Quality

85.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-85_344-377
PDB
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1qwrA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.61 38.0 4.25e-01 99.1% 79.8%
2vvfA02 2.60.120.730 Mainly Beta › Sandwich › Jelly Rolls › 0.61 47.0 4.51e-01 100.0% 72.7%
7ahsA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 38.0 4.22e-01 100.0% 81.8%
4nofB00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 44.0 4.57e-01 96.5% 84.0%
4bfiB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 44.0 4.50e-01 98.2% 83.0%
1ygaA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.56 42.0 3.05e-01 78.9% 87.2%
4awdB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 48.0 3.72e-01 100.0% 71.6%
4l8jA02 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.56 42.0 4.59e-01 100.0% 96.8%
3eo6A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 34.0 3.59e-01 97.4% 67.0%
3v0rA01 2.40.350.20 Mainly Beta › Beta Barrel › AOC barrel-like › 0.55 40.0 3.94e-01 74.6% 91.7%
2jj6A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 48.0 4.57e-01 98.2% 96.3%
4uzgA01 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 46.0 4.14e-01 100.0% 67.3%
3sh4A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 46.0 3.95e-01 100.0% 75.4%
3fzxA00 2.40.360.20 Mainly Beta › Beta Barrel › YmcC-like fold › 0.53 41.0 3.42e-01 85.1% 99.5%
3ge2A00 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.52 38.0 4.19e-01 86.0% 98.9%
1ikpA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 43.0 3.57e-01 92.1% 100.0%
4xrtA01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 43.0 4.02e-01 90.4% 96.5%
2x8kA03 2.60.120.860 Mainly Beta › Sandwich › Jelly Rolls › 0.52 46.0 4.66e-01 98.2% 100.0%
2id4A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 45.0 4.30e-01 100.0% 92.0%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 29.0 3.64e-01 74.6% 98.4%
3hx8A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 39.0 3.81e-01 83.3% 98.4%
5ewnA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.51 45.0 3.88e-01 100.0% 93.5%
5w0kA01 3.90.380.20 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Herpesvirus glycoprotein H, domain D-II 0.51 39.0 2.87e-01 83.3% 66.2%
4ofyD03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 35.0 3.79e-01 99.1% 86.5%
2ztnA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.50 45.0 3.82e-01 100.0% 91.6%
5t5lA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 44.0 3.57e-01 100.0% 96.1%
1nbwA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.50 35.0 3.36e-01 71.9% 72.0%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5080049 11.1.4.23 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg 0.65 34.0 3.85e-01 91.2% 67.1%
3393795 77.1.1.3 beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › MORN_DRC7 0.61 44.0 3.36e-01 74.6% 51.9%
3972567 10.4.1.0 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.61 42.0 4.71e-01 100.0% 91.1%
3526385 11.1.1.1123 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF28919 0.60 41.0 3.68e-01 94.7% 50.0%
4167365 10.4.1.0 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.60 44.0 4.78e-01 100.0% 91.6%
3495079 77.3.1.5 beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › MORN_DRC7 0.60 43.0 3.27e-01 74.6% 50.6%
3719596 77.1.1.3 beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › MORN_DRC7 0.58 42.0 3.67e-01 74.6% 82.9%
138055 10.11.1.1 beta sandwiches › jelly-roll › Thiamin pyrophosphokinase, substrate-binding domain › Thiamin pyrophosphokinase, substrate-binding domain › TPK_B1_binding 0.57 39.0 4.38e-01 100.0% 94.2%
3277897 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.55 45.0 4.15e-01 89.5% 96.7%
3763789 220.1.1.186 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_CAYP2 0.55 42.0 3.91e-01 80.7% 78.6%
169161 10.12.1.35 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Ppnp 0.55 34.0 3.58e-01 97.4% 67.0%
5017958 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.55 43.0 3.95e-01 83.3% 83.3%
3970395 4252.1.1.10 beta barrels › AttH-like › AttH-like › AttH-like › DUF2804 0.55 50.0 4.05e-01 100.0% 91.9%
3727380 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.54 38.0 3.60e-01 71.1% 84.4%
3531792 11.1.1.179 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.54 33.0 3.67e-01 100.0% 77.8%
3287504 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.53 42.0 4.49e-01 100.0% 98.0%
3267677 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 30.0 3.49e-01 92.1% 78.8%
3953254 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.52 46.0 4.01e-01 100.0% 97.8%
5060181 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 32.0 3.58e-01 100.0% 80.0%
4451493 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.52 43.0 3.84e-01 92.1% 75.6%
3781122 10.32.1.6 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein 0.52 46.0 4.01e-01 100.0% 78.9%
5014449 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.51 36.0 4.11e-01 96.5% 98.8%
3653947 71.1.1.17 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › PF28435 0.51 41.0 3.57e-01 87.7% 87.8%
D2 high residues 92-182
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF16190.12 best E1_FCCH 36.2 7.00e-09 76.9% 84.3%
CATH (39)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2v31A01 2.40.30.180 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Ubiquitin-activating enzyme E1, FCCH domain 0.83 70.0 6.84e-01 100.0% 83.5%
1v0fB03 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.77 66.0 6.79e-01 98.9% 97.6%
2m5sA00 2.40.30.240 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.68 62.0 5.56e-01 100.0% 96.8%
2dpyA00 3.40.50.12240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.66 50.0 3.23e-01 98.9% 17.3%
6tdyD01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.65 49.0 5.29e-01 96.7% 98.7%
4wqmA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.65 59.0 5.81e-01 100.0% 92.9%
3op1A02 2.40.30.30 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like 0.64 53.0 4.95e-01 97.8% 73.0%
3e1yE01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.64 53.0 5.46e-01 97.8% 95.3%
4aq1A01 2.60.40.1220 Mainly Beta › Sandwich › Immunoglobulin-like › 0.63 47.0 4.72e-01 96.7% 76.6%
4xotA03 2.40.30.250 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.63 48.0 4.98e-01 100.0% 90.7%
1qfjA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.62 54.0 5.47e-01 97.8% 94.5%
3u28C00 2.40.10.230 Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain 0.62 51.0 5.11e-01 100.0% 89.1%
4b3fX02 2.40.30.270 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.62 56.0 5.49e-01 100.0% 100.0%
2v3mA00 2.40.10.230 Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain 0.61 48.0 4.83e-01 100.0% 84.0%
3vgfA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.59 34.0 3.85e-01 94.5% 79.0%
3w1eA03 2.40.10.410 Mainly Beta › Beta Barrel › Thrombin, subunit H › FlgT, C-terminal domain 0.58 50.0 5.09e-01 96.7% 96.6%
4jzjC03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 35.0 3.91e-01 97.8% 81.4%
3wcyA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 41.0 4.24e-01 100.0% 83.7%
2kzbA00 2.60.40.2830 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 43.0 4.10e-01 95.6% 70.2%
2j43A01 2.60.40.1110 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 39.0 3.84e-01 92.3% 69.3%
5jipA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 40.0 4.03e-01 100.0% 81.1%
5j11C02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 38.0 3.72e-01 97.8% 69.4%
3r8qA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 39.0 4.00e-01 98.9% 83.1%
1nrkA02 3.30.70.1400 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains 0.52 37.0 3.79e-01 74.7% 86.2%
3r8qA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 39.0 3.97e-01 100.0% 83.3%
1y6kR01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 41.0 3.98e-01 100.0% 77.5%
4lsdF00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 40.0 3.97e-01 100.0% 78.6%
1iarB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 43.0 4.24e-01 95.6% 85.4%
3f7pD01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 39.0 3.92e-01 100.0% 82.4%
3tesA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 39.0 3.95e-01 100.0% 80.9%
1fnfA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 39.0 3.96e-01 100.0% 83.1%
3cxeC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 41.0 4.11e-01 97.8% 84.7%
4xjcF00 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.51 44.0 3.68e-01 100.0% 84.0%
3v6oB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 41.0 4.02e-01 95.6% 81.0%
1egjA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 40.0 3.89e-01 100.0% 78.2%
3s9dD01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 39.0 3.87e-01 97.8% 79.2%
5c86A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 42.0 4.09e-01 100.0% 85.1%
1fyhB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 39.0 3.84e-01 100.0% 79.4%
2r9qA02 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.50 43.0 3.63e-01 100.0% 95.1%
ECOD (46)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4028468 1.1.7.35 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › E1_FCCH 0.88 74.0 6.97e-01 100.0% 76.2%
3488003 1.1.7.35 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › E1_FCCH 0.86 76.0 7.88e-01 100.0% 98.8%
199114 1.1.7.35 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › E1_FCCH 0.83 70.0 6.46e-01 100.0% 72.3%
3594588 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.76 72.0 7.10e-01 100.0% 98.9%
5078307 11.21.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein 0.74 57.0 6.19e-01 96.7% 98.7%
3704854 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.73 68.0 6.36e-01 100.0% 90.9%
5056460 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.73 53.0 5.80e-01 98.9% 92.0%
3291083 11.21.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein 0.69 59.0 5.93e-01 100.0% 94.4%
1954233 11.21.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein › TSP_Ig-like 0.68 60.0 6.09e-01 100.0% 97.8%
1714452 11.21.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein › TSP_Ig-like 0.66 56.0 5.80e-01 100.0% 97.7%
4064427 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.66 57.0 5.78e-01 96.7% 95.6%
5019880 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.65 55.0 5.36e-01 100.0% 83.0%
4303291 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.65 59.0 5.77e-01 100.0% 91.0%
4867073 2485.3.1.8 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › P22_CoatProtein 0.65 58.0 5.40e-01 97.8% 98.2%
3263987 11.1.1.29 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.64 47.0 4.92e-01 96.7% 86.3%
4884154 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.63 57.0 4.68e-01 100.0% 77.2%
2448616 3734.1.1.1 beta barrels › P22 coat protein insertion domain › P22 coat protein insertion domain › P22 coat protein insertion domain › P22_CoatProtein 0.62 56.0 5.17e-01 98.9% 97.4%
4980441 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.62 53.0 5.26e-01 95.6% 96.8%
5002155 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.62 53.0 5.19e-01 94.5% 89.0%
4015458 1.1.7.24 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 0.61 52.0 4.96e-01 94.5% 99.0%
3250855 11.1.1.820 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Beta-sand_ComC_2nd 0.60 44.0 4.51e-01 98.9% 81.1%
3266833 11.1.1.29 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.59 47.0 4.75e-01 98.9% 86.7%
3248952 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 44.0 4.57e-01 97.8% 84.7%
4157526 1.1.12.1 beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins › Queuosine_synth 0.59 49.0 4.52e-01 92.3% 71.3%
3680792 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.58 52.0 5.09e-01 100.0% 96.0%
4937705 4.1.1.14 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.56 42.0 4.23e-01 96.7% 77.8%
3735267 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.56 46.0 4.78e-01 94.5% 96.5%
5041412 304.57.1.0 a+b two layers › Alpha-beta plaits › Rpp14/Pop5-like › Rpp14/Pop5-like 0.56 35.0 3.65e-01 83.5% 67.1%
3939011 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.55 43.0 4.16e-01 100.0% 75.2%
1843 11.1.4.11 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › PUD 0.54 39.0 3.77e-01 92.3% 65.4%
3248793 11.1.1.820 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Beta-sand_ComC_2nd 0.54 45.0 4.15e-01 93.4% 97.5%
3561003 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 41.0 4.05e-01 98.9% 80.0%
5034410 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 41.0 4.01e-01 98.9% 78.0%
4937060 12.5.1.0 beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related 0.53 46.0 4.29e-01 100.0% 85.8%
3556406 11.1.1.21 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Tissue_fac 0.53 41.0 4.03e-01 100.0% 78.0%
3818081 1.1.11.6 beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › PF31239 0.52 45.0 4.14e-01 97.8% 82.5%
4591842 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.52 39.0 3.75e-01 97.8% 70.5%
None 0.52 44.0 3.66e-01 100.0% 85.6%
5032029 70.2.1.5 beta barrels › beta-clip › dUTPase-like › dUTPase-like › DCD 0.51 44.0 3.77e-01 100.0% 74.4%
5035269 70.2.1.5 beta barrels › beta-clip › dUTPase-like › dUTPase-like › DCD 0.51 44.0 3.73e-01 100.0% 72.1%
5007272 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 43.0 4.18e-01 98.9% 85.0%
3271362 70.2.1.5 beta barrels › beta-clip › dUTPase-like › dUTPase-like › DCD 0.51 43.0 3.49e-01 100.0% 62.5%
4970133 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 42.0 3.57e-01 96.7% 72.1%
None 0.50 43.0 3.49e-01 100.0% 76.9%
5009352 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 36.0 3.76e-01 98.9% 84.7%
3408833 11.1.1.16 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Transglut_N 0.50 44.0 3.73e-01 97.8% 84.5%
D3 high residues 188-297
PDB
CATH (38)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2v31A01 2.40.30.180 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Ubiquitin-activating enzyme E1, FCCH domain 0.81 59.0 6.23e-01 100.0% 84.5%
1v0fB03 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.73 52.0 5.84e-01 98.2% 96.5%
6tdyD01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.72 47.0 5.50e-01 96.4% 96.0%
1fx0B01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.70 47.0 5.43e-01 96.4% 96.2%
3u28C00 2.40.10.230 Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain 0.67 45.0 4.91e-01 97.3% 82.6%
4wqmA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.66 51.0 5.38e-01 100.0% 91.8%
3op1A02 2.40.30.30 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like 0.65 46.0 4.63e-01 97.3% 72.1%
2gk6A02 2.40.30.230 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.65 46.0 5.20e-01 97.3% 98.8%
4aq1A01 2.60.40.1220 Mainly Beta › Sandwich › Immunoglobulin-like › 0.64 41.0 4.41e-01 96.4% 75.5%
4he6A00 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.63 46.0 5.07e-01 100.0% 93.3%
3w1eA03 2.40.10.410 Mainly Beta › Beta Barrel › Thrombin, subunit H › FlgT, C-terminal domain 0.60 44.0 4.84e-01 95.5% 95.5%
2m5sA00 2.40.30.240 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.58 54.0 5.20e-01 100.0% 96.8%
2e3vA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 40.0 4.17e-01 100.0% 75.7%
1lvmA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.58 37.0 3.85e-01 84.5% 67.9%
2wzpR01 2.30.300.20 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Phage tail base-plate attachment protein, domain D1/D2 0.56 45.0 3.68e-01 84.5% 89.8%
3r8qA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 36.0 3.87e-01 100.0% 80.9%
5j11C02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 34.0 3.54e-01 96.4% 68.4%
3wcyA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 35.0 3.82e-01 100.0% 82.6%
3bpnC03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 36.0 3.80e-01 96.4% 76.2%
3vgfA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.54 27.0 3.30e-01 100.0% 79.0%
5c86A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 41.0 4.26e-01 97.3% 87.1%
2kzbA00 2.60.40.2830 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 37.0 3.68e-01 95.5% 69.3%
3tesA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 35.0 3.74e-01 100.0% 78.7%
4pbxA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 35.0 3.77e-01 100.0% 80.4%
1qr4A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 34.0 3.69e-01 99.1% 80.5%
7syvx01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.52 45.0 4.20e-01 100.0% 75.2%
3r8qA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 35.0 3.73e-01 100.0% 80.4%
4lsdF00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 35.0 3.67e-01 100.0% 76.5%
3r8qA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 34.0 3.72e-01 100.0% 81.1%
2n1kA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 34.0 3.45e-01 100.0% 67.9%
1fnfA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 34.0 3.65e-01 100.0% 82.0%
2v5yA05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 33.0 3.53e-01 97.3% 74.2%
2zuxA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 31.0 3.36e-01 97.3% 72.7%
3kw3B01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.51 43.0 3.90e-01 97.3% 68.7%
4hljA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 36.0 3.62e-01 100.0% 73.2%
4dohB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 36.0 3.66e-01 100.0% 77.1%
6ecaA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 33.0 3.50e-01 100.0% 76.8%
5mybA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 33.0 3.54e-01 100.0% 78.1%
ECOD (40)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
199114 1.1.7.35 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › E1_FCCH 0.81 59.0 5.86e-01 100.0% 73.2%
5079674 11.21.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein 0.79 50.0 6.00e-01 98.2% 94.7%
3594588 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.76 62.0 6.63e-01 100.0% 97.9%
5078307 11.21.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein 0.76 49.0 5.87e-01 96.4% 97.3%
1030933 1.1.7.29 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › End_beta_barrel 0.73 53.0 5.83e-01 99.1% 93.3%
3272448 11.21.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein 0.73 53.0 5.64e-01 99.1% 86.3%
3596642 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.72 50.0 5.59e-01 100.0% 91.8%
3615570 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.67 62.0 6.17e-01 98.2% 97.4%
3247934 1.1.7.41 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › UPF1_1B_dom 0.64 51.0 5.49e-01 100.0% 97.9%
2048195 3734.1.1.1 beta barrels › P22 coat protein insertion domain › P22 coat protein insertion domain › P22 coat protein insertion domain › P22_CoatProtein 0.59 54.0 5.19e-01 100.0% 94.5%
4849089 2485.3.1.8 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › P22_CoatProtein 0.56 49.0 4.86e-01 94.5% 97.4%
5009352 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 36.0 3.93e-01 100.0% 82.4%
3969203 4182.1.1.0 beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like 0.55 41.0 4.13e-01 100.0% 75.7%
3550448 11.1.1.1014 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF30509 0.54 38.0 3.71e-01 100.0% 65.0%
4963504 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 36.0 3.88e-01 97.3% 81.1%
4008248 1.1.7.23 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_9 0.54 49.0 4.70e-01 100.0% 89.2%
5055267 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 44.0 4.51e-01 100.0% 93.3%
4016558 1.1.7.46 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SMUBP-2_HCS1_1B 0.53 49.0 4.42e-01 100.0% 91.7%
3568665 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 36.0 3.75e-01 100.0% 77.0%
3939010 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 33.0 3.54e-01 97.3% 71.6%
3876496 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.53 35.0 3.70e-01 100.0% 75.0%
3569980 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.53 35.0 3.74e-01 99.1% 77.9%
3837962 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 35.0 3.75e-01 100.0% 78.9%
4572309 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.52 47.0 4.45e-01 97.3% 84.6%
5014364 1.1.7.28 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel 0.52 46.0 4.35e-01 97.3% 97.8%
5080711 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 33.0 3.75e-01 97.3% 92.0%
3412977 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.52 34.0 3.57e-01 98.2% 72.0%
1562396 11.1.1.122 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GO-like_E_set 0.52 37.0 3.90e-01 100.0% 83.8%
3875481 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.52 34.0 3.64e-01 100.0% 78.9%
3517827 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 33.0 3.57e-01 99.1% 77.8%
3554521 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 32.0 3.21e-01 100.0% 58.5%
3027185 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 34.0 3.61e-01 100.0% 77.3%
5032025 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.51 45.0 4.64e-01 97.3% 99.0%
4989873 1.1.7.28 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel 0.51 45.0 4.42e-01 97.3% 95.8%
3537286 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.50 35.0 3.60e-01 100.0% 75.2%
3223702 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.50 36.0 3.65e-01 100.0% 74.5%
3858826 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 32.0 3.62e-01 100.0% 97.1%
4981095 11.1.1.284 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD_4 0.50 32.0 3.48e-01 98.2% 78.9%
3893459 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 35.0 3.71e-01 100.0% 83.2%
3529887 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.50 32.0 3.47e-01 95.5% 77.8%