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IMGVR_UViG_3300011971_000029-3300011971-Ga0120175_100070916

Arc-Vir

IMGVR_UViG_3300011971_000029-3300011971-Ga0120175_100070916

Identity

Kingdom:
archaea

Quality

69.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 16-81
PDB
Domain cluster: representative
CATH (39)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.84 60.0 6.29e-01 77.3% 83.1%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.83 63.0 6.15e-01 80.3% 87.5%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.83 57.0 5.73e-01 75.8% 71.2%
4qqgG00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.82 64.0 6.28e-01 83.3% 83.3%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.82 50.0 5.57e-01 83.3% 78.8%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.81 58.0 6.09e-01 75.8% 83.1%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.79 58.0 6.03e-01 77.3% 82.3%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.79 53.0 4.64e-01 74.2% 47.9%
2jngA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.78 59.0 5.57e-01 78.8% 72.7%
7xpkA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.78 57.0 4.36e-01 77.3% 54.5%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 54.0 5.40e-01 75.8% 70.6%
2ckkA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.77 53.0 5.67e-01 71.2% 86.0%
1m1gB03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.77 56.0 5.72e-01 77.3% 79.4%
3pieC09 2.30.30.750 Mainly Beta › Roll › SH3 type barrels. › 0.76 57.0 4.92e-01 78.8% 68.7%
2l3rA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.76 55.0 5.40e-01 77.3% 82.2%
5z8lA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.75 56.0 4.58e-01 80.3% 63.0%
1x6gA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 54.0 5.03e-01 77.3% 70.4%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 54.0 5.49e-01 100.0% 79.7%
1wjrA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 53.0 4.26e-01 77.3% 42.5%
2ky9A01 2.30.30.1130 Mainly Beta › Roll › SH3 type barrels. › 0.72 49.0 4.96e-01 71.2% 77.6%
4b9wA01 2.40.50.90 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.70 48.0 4.02e-01 71.2% 85.2%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.69 50.0 5.18e-01 75.8% 83.3%
2rhiA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 59.0 4.95e-01 100.0% 70.5%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.66 48.0 4.58e-01 77.3% 71.4%
2vobB02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.66 58.0 4.06e-01 100.0% 40.2%
2dl5A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 45.0 4.33e-01 72.7% 70.5%
6ghmC02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 44.0 4.53e-01 71.2% 89.1%
6o5cA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.64 49.0 4.70e-01 83.3% 84.2%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.63 45.0 4.56e-01 78.8% 83.6%
2k5fA01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.62 47.0 4.36e-01 81.8% 74.7%
3zuaA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.62 54.0 4.35e-01 100.0% 78.6%
2gu3A01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 41.0 4.20e-01 75.8% 72.3%
1vwxY00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.60 49.0 3.96e-01 90.9% 50.0%
3en8A01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 42.0 3.59e-01 77.3% 81.2%
2gu3A02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 40.0 4.07e-01 77.3% 77.8%
4rbnA01 3.10.450.330 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 40.0 3.31e-01 78.8% 51.2%
3k67A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.54 45.0 3.52e-01 95.5% 84.6%
2ec1A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 37.0 3.15e-01 72.7% 43.2%
1qwdB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 38.0 2.92e-01 81.8% 65.1%
ECOD (85)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3575865 4.1.1.169 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4819 0.88 66.0 6.47e-01 78.8% 75.7%
3866038 4.1.1.154 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4772 0.88 61.0 5.56e-01 78.8% 56.5%
3910433 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.87 63.0 6.39e-01 78.8% 76.9%
3579591 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.87 60.0 6.52e-01 72.7% 85.5%
3525406 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.87 61.0 5.01e-01 77.3% 43.6%
3707634 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.86 60.0 6.60e-01 77.3% 87.3%
4105328 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.86 60.0 6.05e-01 72.7% 72.3%
3558188 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.86 60.0 5.76e-01 77.3% 64.0%
3858886 4.1.1.169 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4819 0.86 62.0 6.53e-01 80.3% 83.3%
3344796 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.86 61.0 5.60e-01 74.2% 63.9%
3737903 4.1.1.286 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7072 0.85 60.0 6.49e-01 78.8% 87.3%
3199259 4.1.1.286 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7072 0.84 62.0 6.32e-01 78.8% 78.5%
3184389 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.84 63.0 4.51e-01 78.8% 47.4%
3501337 4.1.1.169 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4819 0.84 63.0 5.86e-01 78.8% 86.3%
4524466 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.83 60.0 5.93e-01 78.8% 71.4%
3780847 4.1.1.187 ↗ beta barrels › SH3 › SH3 › SH3 › DIRP 0.83 64.0 4.72e-01 80.3% 65.3%
3405627 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.83 62.0 5.42e-01 84.8% 54.7%
4420173 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.82 62.0 5.93e-01 81.8% 69.3%
3876680 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.82 59.0 5.11e-01 75.8% 55.0%
5042892 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.82 60.0 6.35e-01 77.3% 85.0%
3551576 4.1.1.226 ↗ beta barrels › SH3 › SH3 › SH3 › KDM3B_Tudor 0.81 60.0 5.74e-01 77.3% 72.0%
3473205 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 61.0 4.51e-01 80.3% 77.5%
3257607 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 61.0 5.81e-01 80.3% 84.0%
3416068 4.1.1.187 ↗ beta barrels › SH3 › SH3 › SH3 › DIRP 0.79 60.0 4.47e-01 80.3% 66.5%
3317030 4.1.1.366 ↗ beta barrels › SH3 › SH3 › SH3 › PF26738 0.79 60.0 6.24e-01 80.3% 88.3%
3251940 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.78 58.0 5.58e-01 78.8% 70.7%
3497365 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.78 54.0 5.83e-01 71.2% 89.1%
3768346 4.1.1.226 ↗ beta barrels › SH3 › SH3 › SH3 › KDM3B_Tudor 0.78 61.0 5.85e-01 83.3% 81.3%
3234107 4.1.1.169 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4819 0.78 58.0 5.77e-01 80.3% 81.4%
3926175 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 60.0 5.49e-01 81.8% 63.5%
3554026 4.1.1.233 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.77 55.0 5.75e-01 75.8% 81.7%
3893808 4.1.1.34 ↗ beta barrels › SH3 › SH3 › SH3 › MBT 0.77 57.0 3.56e-01 77.3% 17.5%
3753231 4.1.1.226 ↗ beta barrels › SH3 › SH3 › SH3 › KDM3B_Tudor 0.77 60.0 5.61e-01 83.3% 80.0%
3793656 4.1.1.169 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4819 0.76 69.0 5.27e-01 100.0% 69.7%
3878271 101.1.2.284 ↗ alpha arrays › HTH › HTH › winged helix domain › WAC_Acf1_DNA_bd 0.76 60.0 4.42e-01 83.3% 51.0%
3730229 4.1.1.102 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.76 57.0 5.49e-01 80.3% 70.7%
3714156 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 56.0 5.14e-01 78.8% 74.1%
4168737 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 57.0 5.53e-01 83.3% 82.4%
3706223 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 62.0 5.23e-01 89.4% 62.9%
4565837 4.11.1.2 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 0.73 66.0 5.85e-01 100.0% 78.9%
3190835 4.1.1.286 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7072 0.73 64.0 5.86e-01 93.9% 87.1%
3879747 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 53.0 4.90e-01 77.3% 72.9%
3672735 4.1.1.303 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.72 52.0 5.28e-01 75.8% 84.6%
4026282 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.72 63.0 5.66e-01 100.0% 70.0%
4002679 4.1.1.322 ↗ beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.72 60.0 4.90e-01 90.9% 93.3%
3437523 4.1.1.303 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.72 51.0 5.09e-01 75.8% 78.6%
5032454 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.72 63.0 5.09e-01 100.0% 66.2%
3448975 4.1.1.66 ↗ beta barrels › SH3 › SH3 › SH3 › LBR_tudor 0.72 50.0 5.11e-01 74.2% 76.9%
3829754 4.1.1.158 ↗ beta barrels › SH3 › SH3 › SH3 › DUF3444 0.72 55.0 4.83e-01 81.8% 75.8%
3609629 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.71 62.0 5.49e-01 100.0% 67.4%
3593222 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 52.0 4.85e-01 77.3% 80.5%
3504417 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.71 64.0 5.76e-01 100.0% 75.6%
3818428 4.1.1.66 ↗ beta barrels › SH3 › SH3 › SH3 › LBR_tudor 0.71 53.0 5.12e-01 80.3% 72.0%
3997949 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.71 65.0 5.79e-01 100.0% 74.4%
3917568 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.70 64.0 5.27e-01 100.0% 57.4%
3576219 4.1.1.34 ↗ beta barrels › SH3 › SH3 › SH3 › MBT 0.70 50.0 3.91e-01 77.3% 34.5%
4034320 4.1.1.398 ↗ beta barrels › SH3 › SH3 › SH3 › YolD 0.70 52.0 5.15e-01 78.8% 83.8%
3423337 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.70 55.0 5.19e-01 86.4% 73.8%
3840677 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.70 63.0 5.48e-01 100.0% 67.0%
3570368 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.69 64.0 5.48e-01 100.0% 70.0%
3672445 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 60.0 4.61e-01 95.5% 63.4%
3627842 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 62.0 5.57e-01 100.0% 76.7%
4470603 4.1.1.217 ↗ beta barrels › SH3 › SH3 › SH3 › zf-CCCH_4 0.69 63.0 4.62e-01 100.0% 78.2%
3790897 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 61.0 5.30e-01 100.0% 73.0%
3577224 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.68 61.0 5.50e-01 100.0% 76.7%
3246086 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 61.0 5.42e-01 100.0% 73.7%
3689576 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 60.0 4.60e-01 100.0% 63.2%
3924213 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.68 62.0 5.44e-01 100.0% 69.5%
3393347 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.68 62.0 5.55e-01 100.0% 74.4%
3796759 4.1.1.287 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5641 0.66 50.0 4.46e-01 81.8% 65.3%
3828749 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 47.0 4.57e-01 77.3% 73.3%
3301383 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.65 43.0 4.73e-01 74.2% 88.0%
3519774 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 58.0 4.96e-01 100.0% 62.9%
3660244 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.64 42.0 4.06e-01 71.2% 58.7%
4022025 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.63 57.0 4.37e-01 100.0% 72.4%
3660755 4.8.1.21 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › PTM_DIR17_Tudor 0.63 42.0 4.06e-01 74.2% 61.3%
3589569 243.3.1.13 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF5590 0.59 40.0 4.17e-01 74.2% 76.7%
3599752 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.56 45.0 2.81e-01 92.4% 35.3%
3988706 243.3.1.13 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF5590 0.52 37.0 3.70e-01 77.3% 77.1%
3597599 214.1.1.0 ↗ a+b two layers › SH2 › SH2 › SH2 0.52 40.0 3.68e-01 93.9% 74.0%
3615536 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 38.0 3.30e-01 80.3% 59.3%
3587340 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.51 38.0 3.53e-01 80.3% 71.8%
4955420 2003.1.5.81 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.51 37.0 2.53e-01 80.3% 19.3%
3261845 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 40.0 2.60e-01 93.9% 37.3%
3709058 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.50 42.0 3.33e-01 100.0% 84.5%