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IMGVR_UViG_3300011979_000236-3300011979-Ga0120379_100051416

Arc-Vir

IMGVR_UViG_3300011979_000236-3300011979-Ga0120379_100051416

Quality

89.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-35_54-159
PDB
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5ejlA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.71 47.0 5.03e-01 94.3% 76.6%
1wruA01 2.30.300.10 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold 0.70 42.0 3.94e-01 85.7% 48.6%
4hkhA00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.66 60.0 5.93e-01 96.4% 91.3%
2q9kA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.66 49.0 4.86e-01 98.6% 72.8%
1y12B00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.66 58.0 5.57e-01 96.4% 82.7%
1k28D03 2.40.30.150 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 0.65 43.0 5.15e-01 87.1% 98.9%
3he1A00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.65 58.0 5.76e-01 96.4% 90.5%
3eaaA00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.63 58.0 5.48e-01 96.4% 84.0%
4w64B00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.63 57.0 5.48e-01 96.4% 85.0%
1sc6A03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.62 28.0 3.51e-01 77.1% 68.3%
5is2A01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.62 30.0 3.69e-01 88.6% 70.3%
4ci2B02 2.30.130.40 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like 0.60 45.0 4.75e-01 93.6% 88.0%
2nyiA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.59 29.0 3.72e-01 72.9% 80.2%
2ca9A02 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.58 31.0 3.80e-01 75.7% 79.8%
1rfeA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 45.0 4.62e-01 96.4% 83.8%
2ptfA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 48.0 4.78e-01 96.4% 84.4%
5w7tA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 32.0 3.75e-01 90.0% 77.3%
1mruA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 32.0 3.82e-01 90.7% 83.7%
2lqjA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.54 29.0 3.37e-01 85.0% 72.3%
3i4hX02 3.30.70.1900 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 32.0 3.56e-01 71.4% 76.9%
3f62A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 31.0 3.50e-01 78.6% 75.9%
6ue9L02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 31.0 3.36e-01 79.3% 68.0%
2ab5B01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.51 36.0 3.78e-01 91.4% 79.7%
4hudA01 3.30.2000.40 Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser 0.50 46.0 4.02e-01 100.0% 93.3%
ECOD (41)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4954551 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.94 84.0 8.57e-01 100.0% 95.6%
3502370 1.1.5.47 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube_2 0.84 81.0 7.67e-01 100.0% 97.5%
5080512 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.84 80.0 5.87e-01 100.0% 55.8%
5040331 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.80 75.0 7.43e-01 99.3% 100.0%
4140243 1.1.5.82 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF2001 0.79 60.0 6.61e-01 95.0% 95.7%
4952909 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.78 51.0 5.90e-01 96.4% 88.6%
5078836 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.77 59.0 6.57e-01 95.7% 100.0%
5079559 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.75 58.0 6.43e-01 92.9% 98.3%
4954552 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.75 68.0 6.42e-01 94.3% 95.0%
4929634 1.1.5.47 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube_2 0.75 69.0 5.41e-01 100.0% 50.4%
4032554 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.74 69.0 6.55e-01 100.0% 98.8%
4988100 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.71 60.0 6.38e-01 95.0% 100.0%
4878666 1.1.5.23 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.71 60.0 6.13e-01 96.4% 90.6%
4947204 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.71 55.0 5.87e-01 94.3% 94.2%
4988102 1.1.13.47 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Dit_like 0.70 53.0 6.00e-01 91.4% 99.1%
2674670 1.1.13.6 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 0.69 65.0 6.02e-01 100.0% 80.8%
4957560 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.69 61.0 6.33e-01 94.3% 100.0%
2101663 1.1.5.24 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 0.69 61.0 5.75e-01 93.6% 89.0%
2471641 1.1.5.24 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 0.68 62.0 6.05e-01 96.4% 89.9%
4952430 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.67 47.0 5.15e-01 93.6% 90.9%
4009489 1.1.5.23 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.66 61.0 5.87e-01 96.4% 88.4%
3988859 1.1.7.91 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 0.66 37.0 4.15e-01 71.4% 70.5%
1124583 1.1.5.23 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.66 60.0 5.93e-01 96.4% 91.3%
164720 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.66 49.0 4.86e-01 98.6% 72.8%
3265120 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.65 60.0 5.55e-01 97.9% 85.1%
4929752 1.1.5.23 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.65 58.0 5.59e-01 96.4% 85.2%
3264744 1.1.5.23 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.65 59.0 5.48e-01 97.9% 84.0%
80 1.1.5.23 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.65 58.0 5.54e-01 96.4% 83.1%
3977123 1.1.5.23 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.64 58.0 5.54e-01 96.4% 83.7%
4982153 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.64 58.0 4.60e-01 96.4% 50.0%
3969384 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.64 58.0 5.55e-01 96.4% 86.3%
3941539 1.1.13.40 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_min_tail 0.63 46.0 5.24e-01 88.6% 99.0%
1563850 1.1.5.23 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.63 57.0 5.48e-01 96.4% 85.0%
4116290 304.8.1.5 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.62 32.0 3.82e-01 73.6% 71.0%
5004559 1.1.13.75 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › CIS_tube 0.61 50.0 5.17e-01 87.9% 100.0%
3667551 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.58 33.0 4.10e-01 91.4% 87.8%
3591908 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.55 47.0 4.39e-01 94.3% 93.9%
4074612 304.8.1.5 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.54 30.0 3.50e-01 75.0% 77.9%
4054495 11.1.1.96 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set 0.52 34.0 3.97e-01 80.7% 92.0%
4377299 304.18.1.0 a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS 0.50 31.0 3.52e-01 74.3% 81.9%
3585212 304.124.1.0 a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like 0.50 44.0 3.78e-01 93.6% 88.4%
D2 high residues 170-317
PDB
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4divV01 2.40.30.200 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.67 56.0 5.80e-01 98.0% 94.9%
3eaaA00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.67 62.0 6.05e-01 100.0% 91.4%
4hkhA00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.66 58.0 5.79e-01 100.0% 92.6%
4w64B00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.64 57.0 5.58e-01 99.3% 87.5%
5ejlA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.63 44.0 4.73e-01 99.3% 84.7%
2gujA01 2.30.110.40 Mainly Beta › Roll › Pnp Oxidase; Chain A › Phage tail tube protein 0.61 50.0 5.24e-01 98.6% 95.5%
2hq9B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 44.0 4.60e-01 98.6% 87.6%
2ig6A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 42.0 4.27e-01 100.0% 79.0%
5c94A00 2.40.10.250 Mainly Beta › Beta Barrel › Thrombin, subunit H › Replicase NSP9 0.54 31.0 3.42e-01 85.1% 69.0%
2z4hA01 2.40.128.300 Mainly Beta › Beta Barrel › Lipocalin › NlpE, N-terminal domain 0.52 26.0 3.42e-01 98.0% 88.6%
ECOD (29)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4140243 1.1.5.82 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF2001 0.87 63.0 7.18e-01 98.6% 95.7%
4929634 1.1.5.47 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube_2 0.87 68.0 5.43e-01 98.0% 44.4%
4954552 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.87 81.0 7.91e-01 98.0% 96.9%
4873215 1.1.13.11 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF2001 0.85 72.0 7.47e-01 100.0% 93.6%
5078836 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.83 60.0 6.95e-01 98.6% 100.0%
2101633 1.1.13.1 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tube 0.81 68.0 6.53e-01 100.0% 78.4%
2471641 1.1.5.24 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 0.79 68.0 6.88e-01 100.0% 89.9%
3964955 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.76 72.0 7.00e-01 99.3% 100.0%
4157825 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.76 64.0 6.83e-01 100.0% 100.0%
4957560 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.75 62.0 6.60e-01 98.0% 98.5%
3942828 1.1.13.39 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › KPP10_Orf10 0.74 65.0 6.61e-01 100.0% 95.9%
3502370 1.1.5.47 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube_2 0.73 69.0 6.73e-01 100.0% 93.1%
5004308 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.70 65.0 6.45e-01 100.0% 95.5%
3589778 1.1.5.78 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_TTP_1 0.68 63.0 6.05e-01 100.0% 90.0%
4878666 1.1.5.23 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.67 56.0 5.87e-01 100.0% 94.2%
1444177 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.67 55.0 5.75e-01 96.6% 94.1%
4929752 1.1.5.23 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.66 60.0 5.97e-01 100.0% 92.9%
3969384 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.66 61.0 5.98e-01 100.0% 94.4%
3977123 1.1.5.23 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.66 61.0 5.96e-01 100.0% 91.9%
4034209 1.1.13.4 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail 0.65 52.0 5.50e-01 84.5% 100.0%
4032554 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.65 60.0 5.80e-01 100.0% 88.5%
4009489 1.1.5.23 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.65 58.0 5.69e-01 100.0% 89.7%
1563850 1.1.5.23 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.64 57.0 5.58e-01 99.3% 87.5%
4888732 1.1.13.4 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail 0.63 54.0 5.35e-01 91.9% 86.5%
4033579 1.1.13.4 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail 0.63 50.0 5.39e-01 92.6% 100.0%
205 1.1.13.11 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF2001 0.61 50.0 5.24e-01 98.6% 94.7%
3265120 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.61 57.0 5.36e-01 99.3% 84.6%
3264744 1.1.5.23 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.61 56.0 5.33e-01 100.0% 85.1%
5038472 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.57 38.0 4.33e-01 92.6% 90.9%