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IMGVR_UViG_3300012016_000039-3300012016-Ga0120387_10008137
Arc-VirIMGVR_UViG_3300012016_000039-3300012016-Ga0120387_10008137
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 242-344
Domain cluster:
rep: ON741189.1__UTQ80164.1__vBBceSLY4_000087__00087__D97-189
D2
medium
residues 414-459
Domain cluster:
representative
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qtlA03 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.82 | 60.0 | 4.06e-01 | 78.3% | 51.0% |
| 4ijaA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 53.0 | 4.73e-01 | 80.4% | 49.2% |
| 3lmmB05 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 52.0 | 4.72e-01 | 80.4% | 50.8% |
| 2dbbB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 52.0 | 4.91e-01 | 80.4% | 56.4% |
| 2isyA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 58.0 | 4.04e-01 | 82.6% | 26.1% |
| 1ku3A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 52.0 | 4.72e-01 | 80.4% | 52.5% |
| 1c0wA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 57.0 | 4.83e-01 | 82.6% | 49.3% |
| 3cuqA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 52.0 | 4.24e-01 | 80.4% | 40.0% |
| 2pjpA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 54.0 | 4.90e-01 | 87.0% | 57.4% |
| 1on2A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 55.0 | 4.70e-01 | 89.1% | 50.0% |
| 3i71B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 63.0 | 5.90e-01 | 100.0% | 75.9% |
| 3tqnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 48.0 | 4.07e-01 | 71.7% | 41.1% |
| 3v1vA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.74 | 57.0 | 3.41e-01 | 84.8% | 31.9% |
| 6uglB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 50.0 | 4.68e-01 | 80.4% | 56.9% |
| 2dk5A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 49.0 | 4.39e-01 | 80.4% | 50.0% |
| 6v7xB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 49.0 | 4.66e-01 | 80.4% | 58.9% |
| 1f20A01 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.72 | 58.0 | 3.90e-01 | 87.0% | 37.4% |
| 7eebI01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.72 | 52.0 | 3.56e-01 | 80.4% | 30.8% |
| 3kb9A00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.71 | 59.0 | 3.48e-01 | 91.3% | 29.7% |
| 5c17A00 | 3.30.450.410 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.70 | 51.0 | 3.25e-01 | 87.0% | 17.0% |
| 1jhfA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 52.0 | 4.56e-01 | 80.4% | 53.6% |
| 4d3pA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.70 | 53.0 | 3.70e-01 | 82.6% | 38.1% |
| 2esbA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.68 | 55.0 | 3.72e-01 | 87.0% | 32.7% |
| 4u7bA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 44.0 | 4.72e-01 | 82.6% | 82.1% |
| 7ncyB01 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.65 | 48.0 | 3.52e-01 | 80.4% | 41.3% |
| 3otdA00 | 3.30.70.3000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) | 0.59 | 47.0 | 2.99e-01 | 89.1% | 78.3% |
| 3w0lD01 | 1.10.8.1080 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.59 | 46.0 | 3.52e-01 | 84.8% | 55.4% |
| 5xe7A01 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.57 | 42.0 | 3.15e-01 | 87.0% | 28.2% |
| 1jhgA00 | 1.10.1270.10 | Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like | 0.57 | 48.0 | 3.81e-01 | 100.0% | 45.5% |
| 5axmB00 | 3.30.70.3000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) | 0.57 | 44.0 | 2.83e-01 | 87.0% | 83.7% |
| 3osgA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.57 | 41.0 | 3.84e-01 | 80.4% | 61.7% |
| 4a0zA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 46.0 | 4.33e-01 | 100.0% | 98.3% |
| 8fbnB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.55 | 47.0 | 3.03e-01 | 97.8% | 44.6% |
| 4nqwA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 42.0 | 3.87e-01 | 89.1% | 64.1% |
ECOD (50)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4970461 | 101.1.2.150 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_45 | 0.87 | 55.0 | 4.58e-01 | 80.4% | 40.0% |
| 4963346 | 101.1.2.928 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_Cmi2_C | 0.84 | 53.0 | 5.02e-01 | 80.4% | 54.5% |
| 4021012 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.84 | 55.0 | 4.53e-01 | 80.4% | 41.3% |
| 3503709 | 101.1.2.57 ↗ | alpha arrays › HTH › HTH › winged helix domain › EAP30 | 0.84 | 54.0 | 4.52e-01 | 80.4% | 41.9% |
| 3187803 | 101.1.2.57 ↗ | alpha arrays › HTH › HTH › winged helix domain › EAP30 | 0.83 | 54.0 | 4.49e-01 | 80.4% | 41.3% |
| 3281274 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.83 | 54.0 | 4.41e-01 | 80.4% | 38.7% |
| 5045250 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.83 | 54.0 | 4.58e-01 | 78.3% | 44.3% |
| 5049010 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.82 | 53.0 | 4.84e-01 | 80.4% | 51.7% |
| 4969903 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.82 | 53.0 | 4.36e-01 | 80.4% | 38.7% |
| 4948833 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.82 | 53.0 | 5.22e-01 | 80.4% | 62.0% |
| 3987510 | 101.1.2.89 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_DeoR | 0.81 | 53.0 | 4.98e-01 | 78.3% | 56.4% |
| 3794249 | 101.1.2.57 ↗ | alpha arrays › HTH › HTH › winged helix domain › EAP30 | 0.81 | 53.0 | 4.20e-01 | 80.4% | 36.5% |
| None | — | 0.81 | 58.0 | 5.21e-01 | 89.1% | 56.5% | |
| 4980926 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.81 | 54.0 | 4.05e-01 | 82.6% | 30.5% |
| 3946871 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.80 | 52.0 | 4.51e-01 | 80.4% | 44.3% |
| 4994269 | 101.1.2.673 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N | 0.80 | 52.0 | 4.19e-01 | 80.4% | 36.5% |
| None | — | 0.80 | 57.0 | 4.03e-01 | 89.1% | 26.9% | |
| 3617783 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 51.0 | 4.11e-01 | 80.4% | 36.5% |
| 4980059 | 101.1.2.140 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type | 0.79 | 53.0 | 5.18e-01 | 80.4% | 64.0% |
| 4957813 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.79 | 51.0 | 4.56e-01 | 80.4% | 47.7% |
| 4024947 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 50.0 | 3.67e-01 | 73.9% | 26.1% |
| 4970958 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.78 | 51.0 | 4.57e-01 | 80.4% | 48.4% |
| 4943755 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 53.0 | 4.40e-01 | 80.4% | 41.2% |
| 3943344 | 183.1.1.0 ↗ | alpha duplicates or obligate multimers › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain | 0.77 | 55.0 | 3.83e-01 | 80.4% | 25.0% |
| 5034428 | 101.1.2.139 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_23 | 0.77 | 50.0 | 4.91e-01 | 80.4% | 62.0% |
| 3976357 | 101.1.2.270 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF977 | 0.76 | 51.0 | 3.95e-01 | 78.3% | 33.7% |
| 5006390 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.76 | 50.0 | 4.45e-01 | 80.4% | 47.7% |
| 5034431 | 101.1.2.21 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress | 0.76 | 56.0 | 3.89e-01 | 82.6% | 25.7% |
| 4978382 | 101.1.2.140 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type | 0.76 | 51.0 | 4.80e-01 | 80.4% | 58.2% |
| 5077992 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 49.0 | 4.18e-01 | 80.4% | 41.3% |
| 4960424 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 56.0 | 4.94e-01 | 89.1% | 55.4% |
| 4963579 | 183.1.1.1 ↗ | alpha duplicates or obligate multimers › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Fe_dep_repr_C | 0.75 | 56.0 | 3.97e-01 | 89.1% | 27.4% |
| 4004874 | 101.1.2.104 ↗ | alpha arrays › HTH › HTH › winged helix domain › SelB-wing_3 | 0.75 | 54.0 | 4.68e-01 | 87.0% | 50.7% |
| 4973758 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.75 | 49.0 | 4.39e-01 | 80.4% | 48.4% |
| 5049870 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.74 | 54.0 | 4.61e-01 | 82.6% | 50.0% |
| 4928175 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.74 | 51.0 | 5.31e-01 | 87.0% | 78.6% |
| 3386729 | 101.1.2.142 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 | 0.74 | 53.0 | 4.59e-01 | 87.0% | 51.5% |
| 5046600 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.73 | 52.0 | 4.16e-01 | 89.1% | 38.9% |
| 4927760 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 47.0 | 4.53e-01 | 87.0% | 56.4% |
| 4956290 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.73 | 52.0 | 4.63e-01 | 80.4% | 53.8% |
| 4985650 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.72 | 52.0 | 4.41e-01 | 82.6% | 46.7% |
| 4022241 | 141.1.1.8 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › Terpene_syn_C_2 | 0.72 | 55.0 | 3.52e-01 | 84.8% | 44.3% |
| 4412897 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.72 | 46.0 | 4.67e-01 | 76.1% | 66.7% |
| 5075437 | 101.1.2.140 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type | 0.71 | 51.0 | 4.44e-01 | 80.4% | 50.0% |
| 5018201 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.71 | 49.0 | 4.55e-01 | 89.1% | 56.7% |
| 5079698 | 101.1.2.140 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type | 0.71 | 50.0 | 4.63e-01 | 87.0% | 58.3% |
| 3511100 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.70 | 50.0 | 4.76e-01 | 80.4% | 63.6% |
| 5031306 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.70 | 51.0 | 4.79e-01 | 80.4% | 63.6% |
| 3896790 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 47.0 | 4.01e-01 | 80.4% | 46.7% |
| 3196435 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.62 | 44.0 | 4.34e-01 | 80.4% | 70.0% |