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IMGVR_UViG_3300012199_000008-3300012199-Ga0137383_100008429
Arc-VirIMGVR_UViG_3300012199_000008-3300012199-Ga0137383_100008429
Identity
- Kingdom:
- archaea
Quality
86.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 151-339
Domain cluster:
rep: IMGVR_UViG_3300010237_000006-3300010237-Ga0136250_1000002017__D103-269
D2
medium
residues 4-138
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4idhA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.80 | 73.0 | 6.20e-01 | 100.0% | 62.5% |
| 4h18A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.67 | 48.0 | 3.68e-01 | 74.8% | 80.1% |
| 3ry7A00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.62 | 48.0 | 3.67e-01 | 80.7% | 68.0% |
| 1jqdA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.62 | 53.0 | 4.13e-01 | 91.9% | 77.3% |
| 4i6kA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.60 | 45.0 | 3.66e-01 | 80.0% | 79.8% |
| 3f67A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.60 | 47.0 | 3.87e-01 | 83.0% | 93.8% |
| 7upvA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.60 | 54.0 | 3.81e-01 | 100.0% | 81.9% |
| 3nl6C02 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.60 | 47.0 | 3.67e-01 | 84.4% | 63.6% |
| 2e87A02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 43.0 | 3.83e-01 | 76.3% | 68.2% |
| 2wqpA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.58 | 45.0 | 3.58e-01 | 80.7% | 68.6% |
| 4mwaA00 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.58 | 45.0 | 3.66e-01 | 82.2% | 70.0% |
| 4evsA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 40.0 | 3.71e-01 | 73.3% | 74.3% |
| 6yuqA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.56 | 42.0 | 3.48e-01 | 79.3% | 89.7% |
| 6imeA01 | 3.40.1180.10 | Alpha Beta › 3-Layer(aba) Sandwich › Undecaprenyl pyrophosphate synthetase › Decaprenyl diphosphate synthase-like | 0.55 | 41.0 | 3.32e-01 | 78.5% | 100.0% |
| 7xr9B01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 37.0 | 3.64e-01 | 70.4% | 63.5% |
| 2pgeA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.54 | 49.0 | 4.11e-01 | 100.0% | 60.3% |
| 2goyA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.54 | 44.0 | 3.75e-01 | 97.0% | 52.7% |
| 2wjwA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 41.0 | 3.84e-01 | 78.5% | 88.3% |
| 3ievA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 39.0 | 3.52e-01 | 75.6% | 75.3% |
| 2f6uA00 | 3.20.20.390 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › FMN-linked oxidoreductases | 0.53 | 40.0 | 3.42e-01 | 80.0% | 79.2% |
| 5hc8A00 | 3.40.1180.10 | Alpha Beta › 3-Layer(aba) Sandwich › Undecaprenyl pyrophosphate synthetase › Decaprenyl diphosphate synthase-like | 0.52 | 40.0 | 3.37e-01 | 80.7% | 71.6% |
| 1xngA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.52 | 39.0 | 3.26e-01 | 77.8% | 74.1% |
| 6a6eA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.52 | 40.0 | 3.29e-01 | 82.2% | 65.9% |
| 4evqA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 37.0 | 3.55e-01 | 74.1% | 68.4% |
| 2e4uA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 36.0 | 3.37e-01 | 71.9% | 75.7% |
| 3ro6A02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.51 | 45.0 | 3.75e-01 | 97.8% | 55.8% |
| 1h5qA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 44.0 | 3.66e-01 | 98.5% | 86.2% |
| 7paxA01 | 3.40.1180.10 | Alpha Beta › 3-Layer(aba) Sandwich › Undecaprenyl pyrophosphate synthetase › Decaprenyl diphosphate synthase-like | 0.51 | 38.0 | 3.11e-01 | 79.3% | 64.2% |
| 3caiA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.50 | 44.0 | 3.58e-01 | 96.3% | 67.3% |
| 1f75A00 | 3.40.1180.10 | Alpha Beta › 3-Layer(aba) Sandwich › Undecaprenyl pyrophosphate synthetase › Decaprenyl diphosphate synthase-like | 0.50 | 38.0 | 3.29e-01 | 80.0% | 73.3% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4973762 | 2004.1.1.99 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_6N | 0.89 | 82.0 | 6.51e-01 | 100.0% | 53.8% |
| 4972934 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.88 | 82.0 | 6.76e-01 | 100.0% | 60.0% |
| 3942672 | 2004.1.1.99 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_6N | 0.88 | 84.0 | 6.94e-01 | 100.0% | 60.9% |
| 4988088 | 2004.1.1.99 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_6N | 0.84 | 80.0 | 6.50e-01 | 100.0% | 58.7% |
| 3164472 | 2004.1.1.117 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_3 | 0.81 | 73.0 | 6.84e-01 | 100.0% | 80.6% |
| 3964961 | 2004.1.1.117 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_3 | 0.80 | 74.0 | 6.25e-01 | 100.0% | 62.4% |
| 2132278 | 2004.1.1.99 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_6N | 0.80 | 76.0 | 6.24e-01 | 100.0% | 60.4% |
| 3515959 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.64 | 50.0 | 5.13e-01 | 81.5% | 89.2% |
| 3645620 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.62 | 51.0 | 3.75e-01 | 89.6% | 85.1% |
| 4972512 | 2002.1.1.77 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › RNase_P_p30 | 0.61 | 43.0 | 3.58e-01 | 71.1% | 71.1% |
| 3184437 | 7534.1.1.1 ↗ | a/b three-layered sandwiches › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Prenyltransf | 0.58 | 40.0 | 3.28e-01 | 70.4% | 63.6% |
| 3577032 | 2002.1.1.180 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › hDGE_amylase | 0.58 | 41.0 | 3.53e-01 | 74.1% | 78.2% |
| 4206603 | 2484.1.1.37 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase | 0.57 | 35.0 | 3.88e-01 | 92.6% | 76.2% |
| 5027359 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.57 | 49.0 | 3.77e-01 | 94.1% | 49.0% |
| 4966171 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.57 | 51.0 | 4.29e-01 | 99.3% | 64.8% |
| 4230431 | 7534.1.1.1 ↗ | a/b three-layered sandwiches › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Prenyltransf | 0.57 | 40.0 | 3.14e-01 | 71.1% | 57.3% |
| 3298112 | 7534.1.1.1 ↗ | a/b three-layered sandwiches › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Prenyltransf | 0.56 | 39.0 | 3.24e-01 | 71.9% | 65.1% |
| 3414829 | 7534.1.1.1 ↗ | a/b three-layered sandwiches › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Prenyltransf | 0.55 | 39.0 | 3.07e-01 | 71.9% | 56.9% |
| 5057714 | 7534.1.1.1 ↗ | a/b three-layered sandwiches › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Prenyltransf | 0.55 | 38.0 | 3.26e-01 | 70.4% | 67.6% |
| 4134799 | 7534.1.1.1 ↗ | a/b three-layered sandwiches › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Prenyltransf | 0.55 | 39.0 | 3.21e-01 | 71.9% | 66.8% |
| 4099134 | 7534.1.1.1 ↗ | a/b three-layered sandwiches › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Prenyltransf | 0.55 | 38.0 | 3.27e-01 | 71.9% | 68.9% |
| 4452099 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.55 | 35.0 | 3.47e-01 | 85.2% | 60.7% |
| 4177261 | 7534.1.1.1 ↗ | a/b three-layered sandwiches › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Prenyltransf | 0.54 | 38.0 | 3.16e-01 | 71.1% | 65.6% |
| 1174513 | 2002.1.1.174 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C | 0.54 | 49.0 | 4.18e-01 | 100.0% | 63.3% |
| 4491504 | 2003.1.1.61 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › KR | 0.54 | 47.0 | 3.80e-01 | 98.5% | 74.3% |
| 4998491 | 4002.1.1.0 ↗ | alpha bundles › alpha-helical domain in dehydroquinate synthase-like enzymes › alpha-helical domain in dehydroquinate synthase-like enzymes › alpha-helical domain in dehydroquinate synthase-like enzymes | 0.53 | 46.0 | 3.36e-01 | 97.8% | 87.9% |
| 5036569 | 2007.1.7.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Rossmann-like domain in dehydroquinate synthase-like enzymes › Fe-ADH_2 | 0.53 | 37.0 | 3.61e-01 | 85.9% | 64.0% |
| 3290921 | 2003.1.1.61 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › KR | 0.52 | 47.0 | 3.77e-01 | 100.0% | 80.7% |
| 4864828 | 2002.1.1.78 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PcrB | 0.52 | 39.0 | 3.37e-01 | 80.0% | 79.4% |
| 4206077 | 7534.1.1.1 ↗ | a/b three-layered sandwiches › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Prenyltransf | 0.52 | 39.0 | 3.30e-01 | 79.3% | 70.9% |
| 3557377 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.52 | 39.0 | 3.67e-01 | 77.8% | 83.7% |
| 5070438 | 7584.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › AMP-binding | 0.52 | 45.0 | 3.42e-01 | 99.3% | 94.4% |
| 4983974 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.52 | 38.0 | 3.22e-01 | 76.3% | 76.1% |
| 3960975 | 7534.1.1.1 ↗ | a/b three-layered sandwiches › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Prenyltransf | 0.52 | 40.0 | 3.39e-01 | 82.2% | 67.8% |
| 3966875 | 7577.1.1.3 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_5 | 0.51 | 43.0 | 3.22e-01 | 90.4% | 66.0% |
| 3785504 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.50 | 43.0 | 3.53e-01 | 95.6% | 71.7% |