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IMGVR_UViG_3300012201_000219-3300012201-Ga0137365_100127549
Arc-VirIMGVR_UViG_3300012201_000219-3300012201-Ga0137365_100127549
Identity
- Kingdom:
- archaea
Quality
80.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-106
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6w08A01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.58 | 50.0 | 3.42e-01 | 91.5% | 86.1% |
| 5ziyA01 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.58 | 48.0 | 3.93e-01 | 89.6% | 81.4% |
| 2qg3A00 | 3.30.1960.10 | Alpha Beta › 2-Layer Sandwich › SSo0622-like fold › tRNA wybutosine-synthesizing-like | 0.56 | 43.0 | 3.52e-01 | 81.1% | 88.7% |
| 2yqrA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.52 | 36.0 | 3.68e-01 | 70.8% | 92.2% |
| 6xkyA01 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.52 | 49.0 | 3.97e-01 | 100.0% | 80.2% |
| 3e9lA02 | 1.20.80.40 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › Prp8 RNase H domain, fingers region | 0.52 | 31.0 | 3.28e-01 | 70.8% | 65.3% |
| 3bfmA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.51 | 39.0 | 3.26e-01 | 80.2% | 66.5% |
| 3s6pG00 | 6.10.140.1660 | Special › Helix non-globular › Helix Hairpins › | 0.50 | 28.0 | 3.26e-01 | 84.0% | 77.8% |
| 4ivnA02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.50 | 37.0 | 3.01e-01 | 73.6% | 62.8% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3953664 | 5067.1.1.4 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › MMPL | 0.76 | 47.0 | 3.91e-01 | 89.6% | 36.7% |
| 5049909 | 4120.1.1.0 ↗ | few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP | 0.76 | 58.0 | 6.41e-01 | 82.1% | 98.8% |
| 4997039 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.68 | 46.0 | 3.96e-01 | 93.4% | 42.9% |
| 4598574 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.62 | 56.0 | 4.61e-01 | 100.0% | 93.3% |
| 3025534 | 304.58.1.0 ↗ | a+b two layers › Alpha-beta plaits › FepE-like › FepE-like | 0.61 | 55.0 | 4.49e-01 | 98.1% | 77.8% |
| 3178096 | 3914.1.1.10 ↗ | alpha bundles › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › STIMATE | 0.60 | 47.0 | 3.75e-01 | 85.8% | 41.4% |
| 4991135 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.60 | 38.0 | 3.82e-01 | 79.2% | 63.8% |
| 4001488 | 1081.1.1.1 ↗ | alpha arrays › Glycogen debranching enzyme (GDE) insertion domain › Glycogen debranching enzyme (GDE) insertion domain › Glycogen debranching enzyme (GDE) insertion domain › hDGE_amylase | 0.59 | 55.0 | 4.67e-01 | 99.1% | 77.6% |
| 5083220 | 1075.1.2.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain | 0.58 | 48.0 | 3.12e-01 | 87.7% | 73.9% |
| 3972885 | 1075.1.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane | 0.58 | 37.0 | 2.80e-01 | 87.7% | 25.7% |
| 3176604 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.57 | 52.0 | 3.39e-01 | 100.0% | 30.8% |
| 3701383 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 36.0 | 2.89e-01 | 86.8% | 35.4% |
| 4997639 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 36.0 | 3.69e-01 | 86.8% | 66.7% |
| 4033258 | 3415.1.1.1 ↗ | alpha complex topology › Concentrative nucleoside transporter › Concentrative nucleoside transporter › Concentrative nucleoside transporter › Nucleos_tra2_N,Nucleos_tra2_C,Gate | 0.55 | 48.0 | 3.25e-01 | 96.2% | 49.6% |
| 3772334 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.55 | 44.0 | 3.29e-01 | 93.4% | 32.6% |
| 3608382 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.55 | 38.0 | 3.15e-01 | 72.6% | 68.7% |
| 4032860 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.53 | 46.0 | 3.53e-01 | 91.5% | 62.9% |
| 3611017 | 1189.1.1.6 ↗ | alpha bundles › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › ISG65-75 | 0.53 | 48.0 | 3.52e-01 | 98.1% | 66.2% |
| 3838697 | 7503.1.1.0 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain | 0.53 | 43.0 | 3.60e-01 | 87.7% | 93.5% |
| 3629452 | 101.1.2.98 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDT1 | 0.52 | 41.0 | 3.43e-01 | 84.0% | 75.1% |
| 3581555 | 633.33.1.1 ↗ | alpha bundles › Bromodomain-like › Rogdi › Rogdi › Rogdi_lz | 0.51 | 44.0 | 3.28e-01 | 97.2% | 35.7% |
| 3583067 | 109.4.1.182 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sec7-like_HUS,DCB | 0.51 | 37.0 | 2.29e-01 | 89.6% | 13.1% |
| 4237044 | 621.1.1.3 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Sey1_3HB | 0.51 | 43.0 | 3.31e-01 | 97.2% | 71.1% |
| 3692895 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.51 | 42.0 | 3.30e-01 | 89.6% | 62.2% |
| 1633635 | 320.4.1.3 ↗ | a+b two layers › R3H domain-like › PUB domain › PUB domain › PUB | 0.50 | 35.0 | 3.47e-01 | 71.7% | 83.3% |