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IMGVR_UViG_3300012268_000135-3300012268-Ga0136590_100415411
Arc-VirIMGVR_UViG_3300012268_000135-3300012268-Ga0136590_100415411
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-74
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7dkaA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.66 | 47.0 | 3.31e-01 | 75.0% | 57.4% |
| 3kd3A02 | 1.10.150.210 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Phosphoserine phosphatase; domain 2 | 0.63 | 36.0 | 3.68e-01 | 90.0% | 55.0% |
| 3ll7A01 | 1.10.10.1110 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Methyltransferase PG1098, N-terminal domain | 0.60 | 48.0 | 4.59e-01 | 90.0% | 79.2% |
| 1tmxB00 | 2.60.130.10 | Mainly Beta › Sandwich › Protocatechuate 3,4-Dioxygenase, subunit A › Aromatic compound dioxygenase | 0.59 | 52.0 | 3.34e-01 | 100.0% | 70.4% |
| 1dt9A01 | 3.30.960.10 | Alpha Beta › 2-Layer Sandwich › Translation, Eukaryotic Peptide Chain Release Factor Subunit 1; Chain A › eRF1 domain 1 | 0.56 | 48.0 | 4.01e-01 | 96.7% | 61.0% |
| 3tacB01 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.54 | 43.0 | 3.40e-01 | 88.3% | 65.4% |
| 2kxpA01 | 3.30.1140.60 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › F-actin capping protein, alpha subunit | 0.51 | 40.0 | 3.44e-01 | 91.7% | 67.3% |
| 3qqaA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.50 | 41.0 | 3.24e-01 | 96.7% | 85.1% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4964815 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.95 | 89.0 | 6.36e-01 | 100.0% | 39.3% |
| 4331898 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.89 | 83.0 | 7.08e-01 | 100.0% | 74.4% |
| 3943153 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.86 | 81.0 | 6.06e-01 | 100.0% | 47.7% |
| 4093657 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.79 | 71.0 | 5.41e-01 | 100.0% | 47.4% |
| 3513438 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.68 | 44.0 | 3.80e-01 | 71.7% | 42.1% |
| 3415592 | 241.15.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › PI31_Prot_N | 0.64 | 53.0 | 4.04e-01 | 95.0% | 99.3% |
| 4411875 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 38.0 | 2.98e-01 | 81.7% | 27.4% |
| 157110 | 11.1.4.5 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Dioxygenase_C,Dioxygenase_N | 0.59 | 51.0 | 3.31e-01 | 100.0% | 69.2% |
| 4260289 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.55 | 36.0 | 3.29e-01 | 71.7% | 47.1% |
| 4150867 | 5058.1.1.29 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › AlaE | 0.54 | 42.0 | 3.72e-01 | 88.3% | 78.9% |
| 4024642 | 185.2.1.1 ↗ | alpha superhelices › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like › PfEMP1 core intracellular domain › PfEMP1 core intracellular domain › ATS | 0.51 | 35.0 | 3.63e-01 | 73.3% | 100.0% |
| 4231782 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.51 | 42.0 | 2.75e-01 | 100.0% | 67.3% |