←Back to structures
IMGVR_UViG_3300012970_000789-3300012970-Ga0129338_12828102
Arc-VirIMGVR_UViG_3300012970_000789-3300012970-Ga0129338_12828102
Identity
- Kingdom:
- archaea
Quality
93.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-59
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2fyiC01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.68 | 54.0 | 4.19e-01 | 86.4% | 64.6% |
| 3dnfA03 | 3.40.1010.20 | Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, catalytic domain | 0.65 | 54.0 | 4.67e-01 | 96.6% | 76.8% |
| 2csuA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.65 | 52.0 | 4.11e-01 | 89.8% | 64.6% |
| 2vswA00 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.63 | 48.0 | 3.72e-01 | 84.7% | 42.5% |
| 8oqxA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.62 | 50.0 | 4.20e-01 | 96.6% | 51.8% |
| 3iplB01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.59 | 44.0 | 2.81e-01 | 89.8% | 14.0% |
| 2acfB00 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.59 | 49.0 | 3.57e-01 | 96.6% | 94.2% |
| 3v7iA01 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.58 | 48.0 | 3.40e-01 | 96.6% | 50.2% |
| 3h76A01 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.58 | 49.0 | 3.63e-01 | 100.0% | 38.5% |
| 3gdwB00 | 3.40.50.510 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component | 0.58 | 46.0 | 3.61e-01 | 96.6% | 39.1% |
| 2esnA03 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.58 | 45.0 | 3.91e-01 | 89.8% | 53.5% |
| 3sc6A02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.58 | 42.0 | 3.91e-01 | 79.7% | 62.3% |
| 2x3eA01 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.57 | 47.0 | 3.54e-01 | 98.3% | 63.2% |
| 3ledA01 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.56 | 44.0 | 3.17e-01 | 96.6% | 26.5% |
| 2nq5A01 | 3.20.20.210 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.56 | 45.0 | 2.84e-01 | 98.3% | 53.1% |
| 2nlyA00 | 3.20.20.370 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase | 0.54 | 44.0 | 3.13e-01 | 100.0% | 58.3% |
| 2xdqB01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.51 | 40.0 | 3.22e-01 | 96.6% | 78.9% |
| 3p6lA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.50 | 42.0 | 2.87e-01 | 100.0% | 68.7% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4028930 | 7581.1.1.1 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Thiolase_N | 0.63 | 53.0 | 3.45e-01 | 96.6% | 79.6% |
| 5071340 | 7581.1.1.1 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Thiolase_N | 0.60 | 50.0 | 3.83e-01 | 94.9% | 45.5% |
| 3958287 | 7581.1.1.0 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like | 0.60 | 49.0 | 3.47e-01 | 100.0% | 28.4% |
| 3253369 | 2007.1.6.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain | 0.58 | 47.0 | 4.53e-01 | 96.6% | 87.1% |
| 2719122 | 7529.1.1.1 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Macro | 0.58 | 50.0 | 3.64e-01 | 100.0% | 94.8% |
| 4446558 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.58 | 49.0 | 3.26e-01 | 100.0% | 69.8% |
| 2603924 | 7581.1.1.13 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › ACP_syn_III | 0.56 | 44.0 | 3.15e-01 | 94.9% | 26.5% |
| 5031951 | 2003.1.12.8 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › CoA_binding_2 | 0.56 | 44.0 | 4.13e-01 | 89.8% | 82.7% |
| 4167707 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.54 | 44.0 | 2.87e-01 | 94.9% | 49.7% |
| 4026527 | 2488.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot | 0.54 | 44.0 | 3.07e-01 | 94.9% | 45.6% |
| 5034041 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.52 | 38.0 | 3.01e-01 | 94.9% | 33.3% |
| 3930007 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.51 | 35.0 | 2.54e-01 | 74.6% | 31.1% |
D2
medium
residues 141-265
Domain cluster:
rep: IMGVR_UViG_3300028177_000119-3300028177-Ga0257122_100322216__D1-112