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IMGVR_UViG_3300012974_000004-3300012974-Ga0123350_1000043212

Arc-Vir

IMGVR_UViG_3300012974_000004-3300012974-Ga0123350_1000043212

Quality

84.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-100
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00436.32 best SSB 38.3 1.60e-09 99.0% 89.4%
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1z9fA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.96 77.0 8.08e-01 100.0% 89.9%
5odnC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.94 87.0 8.47e-01 100.0% 90.2%
5gqoA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.92 73.0 7.36e-01 100.0% 82.5%
1ue6D00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.91 80.0 7.80e-01 100.0% 85.6%
2vw9B00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.91 86.0 8.34e-01 100.0% 95.2%
3kojB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.91 75.0 7.82e-01 100.0% 92.2%
2cwaA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.90 75.0 7.15e-01 100.0% 77.1%
3ulpD00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.88 84.0 7.85e-01 100.0% 91.2%
1se8A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.88 81.0 7.64e-01 100.0% 83.8%
6rupA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.87 82.0 7.74e-01 100.0% 91.0%
4gs3A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.86 71.0 7.38e-01 100.0% 92.2%
4me3A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.85 68.0 6.77e-01 100.0% 82.5%
4damC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.85 74.0 7.31e-01 100.0% 88.0%
2hqlA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.83 71.0 7.33e-01 99.0% 95.6%
3fhwA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.83 74.0 7.39e-01 100.0% 90.9%
3k7uC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.83 73.0 7.27e-01 100.0% 90.8%
4pofA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.82 69.0 6.73e-01 100.0% 82.7%
3u4zA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.82 63.0 6.06e-01 100.0% 71.6%
3k8aB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.81 73.0 7.09e-01 100.0% 88.3%
4dkaC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.80 66.0 6.93e-01 100.0% 96.5%
1l0wA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.79 64.0 6.17e-01 100.0% 76.4%
2vl6A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.79 73.0 6.94e-01 100.0% 85.7%
1v1qA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.77 72.0 6.87e-01 100.0% 86.4%
3i7fA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.77 65.0 5.82e-01 100.0% 66.4%
6ro0F00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.68 57.0 5.75e-01 100.0% 88.8%
5jpnC02 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.65 55.0 4.62e-01 100.0% 55.4%
1eu3A02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.64 48.0 5.18e-01 100.0% 95.0%
4bwgD00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.63 52.0 5.23e-01 97.9% 89.7%
4z9cB00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.62 56.0 5.30e-01 100.0% 87.0%
1pfoA02 3.30.1040.20 Alpha Beta › 2-Layer Sandwich › Carboxypeptidase Inhibitor; Chain A › 0.59 28.0 3.51e-01 100.0% 77.4%
7k98B01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 51.0 4.84e-01 99.0% 81.6%
2jmuA01 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.55 41.0 3.16e-01 79.2% 84.5%
4ibnA01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.53 39.0 3.23e-01 80.2% 95.2%
3ke7B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 35.0 3.13e-01 93.8% 48.9%
3cnxA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 35.0 3.16e-01 92.7% 49.3%
ECOD (74)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4277262 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.97 93.0 8.54e-01 100.0% 83.1%
4032979 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.96 93.0 8.77e-01 100.0% 87.3%
4478491 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.95 91.0 8.78e-01 100.0% 94.3%
4170378 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.94 90.0 8.36e-01 100.0% 86.1%
3375524 2.1.1.229 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30940 0.93 86.0 7.85e-01 100.0% 76.7%
4680392 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.92 88.0 8.31e-01 100.0% 86.4%
3839607 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.92 88.0 8.09e-01 100.0% 84.7%
3924081 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.92 88.0 7.52e-01 100.0% 72.1%
159268 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.92 82.0 6.18e-01 100.0% 43.7%
4232994 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.92 87.0 8.22e-01 100.0% 86.4%
4137219 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.91 86.0 8.48e-01 100.0% 94.0%
174115 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.91 75.0 7.96e-01 100.0% 96.5%
4044404 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.91 86.0 8.35e-01 100.0% 96.2%
294 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.89 85.0 7.21e-01 100.0% 71.0%
3616890 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.89 84.0 7.84e-01 100.0% 85.2%
3814285 2.1.1.229 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30940 0.88 84.0 7.93e-01 100.0% 87.3%
2845667 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.88 78.0 7.45e-01 100.0% 82.6%
3215667 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.87 83.0 7.59e-01 100.0% 85.0%
3491964 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.87 82.0 7.25e-01 100.0% 90.8%
3995685 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.86 82.0 7.79e-01 100.0% 90.8%
4047115 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.86 81.0 7.99e-01 100.0% 95.0%
3608487 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.86 79.0 7.66e-01 100.0% 88.6%
2035523 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.86 81.0 7.62e-01 100.0% 88.4%
3716709 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.85 80.0 7.31e-01 100.0% 81.3%
4029733 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.85 71.0 6.64e-01 100.0% 73.0%
4948015 2.1.1.358 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM 0.85 75.0 7.14e-01 100.0% 81.8%
3701262 2.1.1.225 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30388 0.85 79.0 7.05e-01 100.0% 86.2%
3702518 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.85 79.0 7.50e-01 100.0% 98.2%
5025358 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.84 77.0 7.21e-01 100.0% 80.9%
3600626 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.84 77.0 7.64e-01 100.0% 93.0%
3473720 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.84 78.0 7.41e-01 100.0% 86.4%
5082734 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.83 72.0 6.65e-01 100.0% 73.3%
5023132 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.83 75.0 7.13e-01 100.0% 83.6%
164228 2.1.1.54 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF3217 0.83 72.0 7.00e-01 100.0% 85.6%
3712376 2.1.1.225 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30388 0.82 77.0 7.12e-01 100.0% 84.2%
3594959 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.82 70.0 6.67e-01 100.0% 79.1%
3593304 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.82 67.0 6.02e-01 100.0% 64.8%
3599731 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.82 78.0 6.09e-01 100.0% 61.4%
3255514 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.82 77.0 6.24e-01 100.0% 85.3%
3555125 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.82 77.0 6.88e-01 100.0% 78.5%
3703275 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.82 78.0 7.23e-01 100.0% 93.0%
3611898 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.82 73.0 6.66e-01 100.0% 73.6%
3830448 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.82 77.0 6.57e-01 100.0% 71.0%
5012899 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.82 68.0 6.52e-01 100.0% 77.3%
3448049 2.1.1.229 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30940 0.82 76.0 7.32e-01 100.0% 88.6%
5003898 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.81 75.0 7.05e-01 100.0% 82.6%
4966537 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.81 76.0 6.28e-01 100.0% 87.5%
4238279 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.81 76.0 7.09e-01 100.0% 87.0%
3365669 2.1.1.229 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30940 0.81 76.0 7.20e-01 100.0% 86.4%
3481495 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.81 76.0 6.12e-01 100.0% 85.9%
3712229 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.80 76.0 6.10e-01 100.0% 75.9%
3921372 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.80 72.0 6.63e-01 100.0% 76.7%
4122961 2.1.1.122 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB_1 0.80 74.0 7.30e-01 100.0% 94.0%
3690510 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.80 73.0 7.02e-01 100.0% 88.2%
4068016 2.1.1.122 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB_1 0.80 74.0 7.21e-01 100.0% 90.5%
3931744 2.1.1.141 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › WCOB 0.79 68.0 5.73e-01 100.0% 58.0%
3197159 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.79 74.0 4.69e-01 100.0% 28.6%
3829265 2.1.1.229 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30940 0.78 75.0 6.83e-01 100.0% 93.3%
4626934 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.78 75.0 7.26e-01 100.0% 92.4%
4084495 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.78 71.0 6.92e-01 100.0% 90.5%
317 2.1.1.122 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB_1 0.77 72.0 6.87e-01 100.0% 86.4%
3707381 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.77 68.0 6.19e-01 100.0% 72.0%
3467519 2.1.1.229 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30940 0.77 67.0 6.53e-01 92.7% 88.6%
3596629 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.75 70.0 5.93e-01 100.0% 68.0%
3598329 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.72 67.0 6.04e-01 100.0% 75.2%
3808110 2.1.1.130 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223 0.71 64.0 5.52e-01 100.0% 64.7%
4032314 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 64.0 5.99e-01 100.0% 83.5%
3279068 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 62.0 5.89e-01 100.0% 82.7%
3965228 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 55.0 5.60e-01 100.0% 93.7%
3893747 2.3.1.2 beta barrels › OB-fold › TIMP-like › TIMP-like › NTR 0.63 53.0 4.61e-01 100.0% 60.0%
4966947 5.1.2.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.57 44.0 3.05e-01 83.3% 49.9%
4586503 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.54 44.0 3.98e-01 90.6% 96.3%
3645656 243.3.1.19 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 0.53 40.0 4.38e-01 93.8% 96.2%
3577548 331.12.1.0 a+b two layers › TBP-like › YugN-like › YugN-like 0.50 33.0 3.19e-01 88.5% 57.5%