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IMGVR_UViG_3300012979_002154-3300012979-Ga0123348_100094064
Arc-VirIMGVR_UViG_3300012979_002154-3300012979-Ga0123348_100094064
Identity
- Kingdom:
- archaea
Quality
88.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-52
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7vpqF01 | 2.60.40.3130 | Mainly Beta › Sandwich › Immunoglobulin-like › Coronavirus S1 glycoprotein, central receptor binding domain (RBD) | 0.63 | 43.0 | 3.33e-01 | 72.7% | 54.0% |
| 4eygA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 42.0 | 2.83e-01 | 70.5% | 20.2% |
| 6y79C01 | 1.10.645.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome-c3 Hydrogenase; chain B › Cytochrome-c3 Hydrogenase, chain B | 0.63 | 44.0 | 2.60e-01 | 75.0% | 9.7% |
| 2iv2X01 | 2.20.25.90 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ADC-like domains | 0.63 | 43.0 | 4.10e-01 | 75.0% | 69.1% |
| 4agsA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.60 | 42.0 | 3.52e-01 | 77.3% | 83.5% |
| 3mlqH00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.60 | 42.0 | 4.33e-01 | 79.5% | 83.3% |
| 2e2dC02 | 2.40.50.120 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.59 | 39.0 | 3.19e-01 | 70.5% | 96.8% |
| 3dcxA00 | 2.30.29.50 | Mainly Beta › Roll › PH-domain like › Bacterial Pleckstrin homology domain | 0.58 | 41.0 | 3.13e-01 | 77.3% | 29.9% |
| 2mp1A00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.58 | 39.0 | 3.35e-01 | 70.5% | 41.6% |
| 4gc1A02 | 2.90.10.10 | Mainly Beta › Orthogonal Prism › Agglutinin, subunit A › Bulb-type lectin domain | 0.57 | 41.0 | 3.19e-01 | 79.5% | 72.3% |
| 4dkkA02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.56 | 40.0 | 3.41e-01 | 77.3% | 51.4% |
| 2k18A02 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.54 | 38.0 | 2.93e-01 | 77.3% | 65.9% |
| 3k1lA01 | 3.30.457.40 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › | 0.53 | 38.0 | 3.09e-01 | 79.5% | 42.4% |
| 2wweA01 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.50 | 38.0 | 3.16e-01 | 97.7% | 43.3% |
| 3weeA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.50 | 36.0 | 2.53e-01 | 86.4% | 27.3% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4188237 | 4325.1.1.1 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 | 0.62 | 43.0 | 4.00e-01 | 72.7% | 74.5% |
| 3184544 | 708.1.2.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like | 0.61 | 44.0 | 3.04e-01 | 79.5% | 26.0% |
| 1557348 | 4.1.1.32 ↗ | beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID | 0.60 | 42.0 | 4.33e-01 | 79.5% | 83.3% |
| 5014020 | 1001.1.1.1 ↗ | a+b two layers › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Molybdop_Fe4S4 | 0.59 | 40.0 | 3.98e-01 | 70.5% | 71.1% |
| 3782336 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.58 | 41.0 | 3.13e-01 | 97.7% | 27.7% |
| 4297945 | 4325.1.1.1 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 | 0.58 | 41.0 | 3.88e-01 | 77.3% | 63.6% |
| 3216933 | 277.1.1.0 ↗ | a+b two layers › PX domain › PX domain › PX domain | 0.58 | 42.0 | 3.25e-01 | 77.3% | 54.7% |
| 4029094 | 3257.1.1.0 ↗ | a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain | 0.57 | 40.0 | 2.60e-01 | 75.0% | 18.0% |
| 3371023 | 3935.1.1.0 ↗ | extended segments › 4E-BP2 › 4E-BP2 › 4E-BP2 | 0.54 | 36.0 | 3.94e-01 | 70.5% | 97.0% |
| 4891010 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.54 | 39.0 | 2.27e-01 | 97.7% | 7.3% |
| 3649363 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.52 | 41.0 | 3.79e-01 | 90.9% | 71.7% |
| 3719211 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.52 | 36.0 | 3.38e-01 | 72.7% | 69.1% |
| 151088 | 2485.1.1.39 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › GST_N_2 | 0.52 | 42.0 | 3.53e-01 | 100.0% | 98.9% |