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IMGVR_UViG_3300012983_000214-3300012983-Ga0123349_1000122021
Arc-VirIMGVR_UViG_3300012983_000214-3300012983-Ga0123349_1000122021
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 38-97_188-293
Domain cluster:
rep: IMGVR_UViG_648028040_000001-648028040-648194435__D26-229
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04984.20 best | Phage_sheath_1 | 69.5 | 4.40e-19 | 63.9% | 68.5% |
| PF22671.2 | Gp18_domIII_N | 32.0 | 1.80e-07 | 35.5% | 94.8% |
CATH (49)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3l49A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.71 | 50.0 | 5.61e-01 | 100.0% | 93.0% |
| 3rotA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.70 | 51.0 | 5.61e-01 | 100.0% | 92.6% |
| 3s99A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.70 | 48.0 | 4.57e-01 | 100.0% | 59.8% |
| 4rweA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.68 | 48.0 | 5.40e-01 | 100.0% | 93.0% |
| 3d8uB01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.67 | 46.0 | 5.33e-01 | 100.0% | 96.7% |
| 5ul3A01 | 3.40.50.280 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain | 0.66 | 53.0 | 5.48e-01 | 100.0% | 89.1% |
| 4jgiB02 | 3.40.50.280 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain | 0.65 | 47.0 | 5.28e-01 | 98.8% | 96.0% |
| 4dadA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.65 | 46.0 | 5.19e-01 | 98.8% | 93.8% |
| 4xc7B01 | 3.40.50.280 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain | 0.64 | 50.0 | 5.34e-01 | 98.2% | 93.1% |
| 4ldaB00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 44.0 | 4.97e-01 | 99.4% | 94.5% |
| 2cb0A02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.63 | 44.0 | 4.60e-01 | 99.4% | 78.3% |
| 3zl8A03 | 3.90.190.20 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain | 0.62 | 40.0 | 4.37e-01 | 91.0% | 77.7% |
| 4xfkA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.62 | 58.0 | 5.26e-01 | 100.0% | 88.8% |
| 3nyqA01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.60 | 48.0 | 3.68e-01 | 84.3% | 86.6% |
| 4lhsA02 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.59 | 53.0 | 5.12e-01 | 97.6% | 96.3% |
| 2vycA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 46.0 | 5.00e-01 | 98.8% | 97.8% |
| 3hcwA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 42.0 | 4.52e-01 | 98.2% | 85.3% |
| 4q6bA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.58 | 40.0 | 4.46e-01 | 100.0% | 86.6% |
| 1lhpA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.58 | 53.0 | 4.31e-01 | 100.0% | 79.7% |
| 7jt8I02 | 3.90.190.20 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain | 0.56 | 40.0 | 4.26e-01 | 88.6% | 83.3% |
| 3bs4A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 39.0 | 3.42e-01 | 91.6% | 47.8% |
| 5v8sA02 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.56 | 45.0 | 4.75e-01 | 99.4% | 96.6% |
| 1e5dA01 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.55 | 44.0 | 4.75e-01 | 97.6% | 100.0% |
| 2cb9A01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 46.0 | 4.56e-01 | 90.4% | 97.7% |
| 3regA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 50.0 | 4.97e-01 | 100.0% | 98.2% |
| 4d02A02 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.54 | 44.0 | 4.65e-01 | 97.0% | 100.0% |
| 1jmkC01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 45.0 | 4.50e-01 | 90.4% | 97.1% |
| 1yu9A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 48.0 | 4.84e-01 | 98.8% | 98.2% |
| 1d5cA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 48.0 | 4.85e-01 | 98.2% | 99.4% |
| 4rxkA01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.53 | 48.0 | 4.12e-01 | 100.0% | 63.2% |
| 1fuiA01 | 3.40.50.1070 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 48.0 | 4.74e-01 | 98.8% | 92.6% |
| 3ghfA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.53 | 30.0 | 3.71e-01 | 94.6% | 90.0% |
| 3erpA01 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.53 | 44.0 | 3.65e-01 | 90.4% | 61.2% |
| 7jt8I01 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.52 | 47.0 | 4.23e-01 | 97.6% | 87.9% |
| 3mc3A00 | 3.40.1260.10 | Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical Protein Ychn; Chain: A, › DsrEFH-like | 0.52 | 35.0 | 4.04e-01 | 96.4% | 93.4% |
| 6ovqA00 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.52 | 45.0 | 3.70e-01 | 92.8% | 63.2% |
| 6fnuA00 | 3.20.20.220 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.52 | 44.0 | 3.67e-01 | 91.6% | 92.9% |
| 3u31A01 | 3.40.50.1220 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain | 0.52 | 40.0 | 4.12e-01 | 95.2% | 82.3% |
| 3t8iA00 | 3.90.245.10 | Alpha Beta › Alpha-Beta Complex › Inosine-uridine Nucleoside N-ribohydrolase; Chain A › Ribonucleoside hydrolase-like | 0.52 | 45.0 | 3.70e-01 | 95.2% | 80.4% |
| 2iu4A01 | 3.40.50.10440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dihydroxyacetone kinase; domain 1 | 0.51 | 46.0 | 4.55e-01 | 96.4% | 94.2% |
| 2f62A00 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 43.0 | 4.43e-01 | 98.8% | 94.3% |
| 3di1A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.51 | 42.0 | 3.51e-01 | 87.3% | 85.2% |
| 4xkyA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.51 | 42.0 | 3.54e-01 | 88.6% | 73.5% |
| 1oi2A01 | 3.40.50.10440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dihydroxyacetone kinase; domain 1 | 0.51 | 45.0 | 4.51e-01 | 96.4% | 95.4% |
| 2jgdA04 | 3.40.50.11610 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain | 0.51 | 39.0 | 4.01e-01 | 89.2% | 83.6% |
| 6fcxA01 | 3.20.20.220 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.51 | 43.0 | 3.66e-01 | 91.6% | 94.7% |
| 2r8wA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.51 | 41.0 | 3.42e-01 | 86.7% | 93.9% |
| 4cczA01 | 3.20.20.330 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Homocysteine-binding-like domain | 0.51 | 46.0 | 3.76e-01 | 100.0% | 96.2% |
| 3cjpA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.50 | 45.0 | 3.84e-01 | 96.4% | 78.6% |
ECOD (58)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2391375 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.85 | 76.0 | 6.66e-01 | 100.0% | 67.1% |
| 3164915 | 3019.1.1.11 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Phage_sheath_1 | 0.77 | 72.0 | 6.45e-01 | 100.0% | 78.2% |
| 4995822 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.76 | 73.0 | 6.14e-01 | 100.0% | 72.5% |
| 4056309 | 2004.1.1.105 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinase-PPPase | 0.63 | 42.0 | 4.76e-01 | 87.3% | 88.0% |
| 4013457 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.63 | 57.0 | 5.54e-01 | 98.8% | 87.0% |
| 3604449 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.63 | 43.0 | 4.46e-01 | 100.0% | 72.5% |
| 1106391 | 7570.1.1.1 ↗ | a/b three-layered sandwiches › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › Mur_ligase_C | 0.63 | 40.0 | 4.42e-01 | 92.8% | 78.1% |
| 4190724 | 2007.1.2.13 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_6 | 0.62 | 58.0 | 4.86e-01 | 100.0% | 72.2% |
| 4247326 | 2004.1.1.105 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinase-PPPase | 0.61 | 39.0 | 4.76e-01 | 88.0% | 100.0% |
| 3287239 | 2007.6.1.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS | 0.59 | 43.0 | 4.25e-01 | 97.6% | 69.3% |
| 3386096 | 2004.1.1.36 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Dynamin_N | 0.58 | 52.0 | 4.42e-01 | 97.6% | 98.9% |
| 4987652 | 7512.1.1.107 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › DUF354 | 0.58 | 42.0 | 4.39e-01 | 98.8% | 81.3% |
| 4997232 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.57 | 53.0 | 3.92e-01 | 100.0% | 84.3% |
| 5039011 | 2007.1.7.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Rossmann-like domain in dehydroquinate synthase-like enzymes › Fe-ADH | 0.57 | 46.0 | 4.62e-01 | 87.3% | 84.2% |
| 5078444 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.57 | 41.0 | 3.73e-01 | 97.6% | 55.1% |
| 3188180 | 2004.1.1.36 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Dynamin_N | 0.56 | 51.0 | 3.92e-01 | 99.4% | 57.2% |
| 3777902 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.56 | 51.0 | 4.76e-01 | 99.4% | 79.5% |
| 3240979 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.55 | 47.0 | 4.76e-01 | 99.4% | 90.9% |
| 3370054 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.55 | 51.0 | 4.85e-01 | 100.0% | 88.9% |
| 3617284 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.55 | 50.0 | 4.03e-01 | 99.4% | 52.8% |
| 5045711 | 2007.2.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_1 | 0.55 | 44.0 | 4.64e-01 | 98.2% | 95.3% |
| 5037488 | 2007.1.11.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › L-fucose isomerase, N-terminal and second domains › Fucose_iso_N1 | 0.54 | 50.0 | 4.98e-01 | 99.4% | 95.9% |
| 4971408 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.54 | 50.0 | 4.76e-01 | 100.0% | 91.8% |
| 3593602 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.54 | 50.0 | 4.77e-01 | 100.0% | 99.0% |
| 3265349 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.54 | 49.0 | 4.67e-01 | 98.8% | 88.9% |
| 3177660 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.54 | 49.0 | 4.57e-01 | 98.8% | 94.3% |
| 3713239 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.54 | 49.0 | 4.58e-01 | 98.8% | 79.0% |
| 3870334 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.54 | 50.0 | 4.09e-01 | 99.4% | 56.3% |
| 3510742 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.54 | 50.0 | 4.72e-01 | 99.4% | 89.7% |
| 3895426 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.54 | 50.0 | 4.60e-01 | 99.4% | 78.9% |
| 3173397 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.54 | 50.0 | 4.76e-01 | 100.0% | 96.8% |
| 3905232 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.54 | 49.0 | 3.97e-01 | 99.4% | 52.4% |
| 4998317 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.54 | 49.0 | 4.39e-01 | 100.0% | 97.9% |
| 3173241 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.54 | 50.0 | 4.68e-01 | 100.0% | 85.5% |
| 4673341 | 2007.6.1.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS | 0.54 | 48.0 | 3.71e-01 | 97.6% | 76.7% |
| 5076137 | 2004.1.1.164 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Roc | 0.53 | 48.0 | 4.72e-01 | 98.8% | 90.0% |
| 3252507 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.53 | 49.0 | 4.40e-01 | 99.4% | 74.2% |
| 4944358 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.53 | 47.0 | 4.81e-01 | 100.0% | 97.6% |
| 4947669 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.53 | 49.0 | 4.78e-01 | 99.4% | 91.7% |
| 3412122 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.53 | 49.0 | 4.63e-01 | 100.0% | 86.7% |
| 3251264 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.53 | 48.0 | 4.65e-01 | 98.8% | 88.9% |
| 5047886 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.53 | 48.0 | 4.69e-01 | 99.4% | 91.8% |
| 5025607 | 2003.1.6.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like | 0.53 | 48.0 | 4.63e-01 | 99.4% | 95.1% |
| 3249147 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.53 | 48.0 | 4.64e-01 | 99.4% | 94.2% |
| 5065606 | 300.1.1.6 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › Regulator_TrmB | 0.53 | 38.0 | 4.13e-01 | 89.8% | 89.6% |
| 3518097 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.53 | 49.0 | 4.54e-01 | 100.0% | 83.4% |
| 3480123 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.52 | 47.0 | 4.44e-01 | 98.8% | 82.9% |
| 5075254 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.52 | 48.0 | 4.69e-01 | 100.0% | 96.1% |
| 4948137 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.52 | 48.0 | 4.73e-01 | 100.0% | 95.4% |
| 5070528 | 2004.1.1.164 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Roc | 0.52 | 47.0 | 4.59e-01 | 98.8% | 95.7% |
| 3265152 | 2010.1.1.2 ↗ | a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › Dak1 | 0.52 | 46.0 | 4.34e-01 | 96.4% | 94.5% |
| 1578286 | 2002.1.1.156 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Fas1-AflB-like_hel | 0.52 | 43.0 | 3.56e-01 | 88.6% | 89.9% |
| 3284406 | 2002.1.1.90 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MTHFR | 0.51 | 44.0 | 3.60e-01 | 92.2% | 91.6% |
| 4975981 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.51 | 46.0 | 4.51e-01 | 97.6% | 98.9% |
| 3627563 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.51 | 46.0 | 4.31e-01 | 99.4% | 88.1% |
| 4032488 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.51 | 47.0 | 4.33e-01 | 99.4% | 78.6% |
| None | — | 0.51 | 46.0 | 4.31e-01 | 99.4% | 80.0% | |
| 4965813 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.50 | 45.0 | 4.07e-01 | 97.6% | 98.2% |
D2
high
residues 107-181
Domain cluster:
representative
CATH (59)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hxlA02 | 2.60.40.4290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.89 | 79.0 | 7.32e-01 | 100.0% | 77.8% |
| 3lmlA03 | 2.60.40.4290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.87 | 79.0 | 7.53e-01 | 100.0% | 84.7% |
| 7clyA01 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.65 | 54.0 | 4.19e-01 | 93.3% | 89.8% |
| 3djcB01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.65 | 51.0 | 4.87e-01 | 84.0% | 98.9% |
| 2qh9A00 | 3.30.2170.10 | Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily | 0.65 | 54.0 | 4.10e-01 | 90.7% | 91.0% |
| 2khxA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.65 | 48.0 | 4.78e-01 | 80.0% | 88.6% |
| 5f47B00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.64 | 50.0 | 4.01e-01 | 85.3% | 73.7% |
| 2l2mA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.63 | 48.0 | 4.93e-01 | 81.3% | 92.9% |
| 2aujD03 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.63 | 44.0 | 4.85e-01 | 89.3% | 88.7% |
| 1x49A01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.63 | 47.0 | 4.84e-01 | 80.0% | 90.0% |
| 1s3zA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.62 | 48.0 | 3.85e-01 | 82.7% | 72.1% |
| 3u2gA02 | 2.60.98.40 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › DU1608 C-terminal domain | 0.62 | 53.0 | 4.47e-01 | 94.7% | 76.7% |
| 1pqzA01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.62 | 49.0 | 4.05e-01 | 86.7% | 65.0% |
| 3hrgA02 | 3.30.420.260 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF3822, C-terminal domain | 0.62 | 49.0 | 4.25e-01 | 85.3% | 75.4% |
| 3wt0A02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.62 | 49.0 | 3.84e-01 | 86.7% | 91.9% |
| 2ychA03 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.61 | 51.0 | 4.28e-01 | 89.3% | 97.5% |
| 3fruA01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.61 | 50.0 | 3.91e-01 | 94.7% | 49.7% |
| 4ffeX00 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.60 | 50.0 | 4.00e-01 | 90.7% | 55.3% |
| 1c16A01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.60 | 49.0 | 3.89e-01 | 90.7% | 59.5% |
| 4a2bA03 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.60 | 46.0 | 4.31e-01 | 84.0% | 93.7% |
| 5eoxB03 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.59 | 49.0 | 4.09e-01 | 89.3% | 98.4% |
| 3dsbA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.59 | 41.0 | 3.74e-01 | 72.0% | 100.0% |
| 3nuwA01 | 3.30.420.300 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 2-keto-3-deoxy-galactonokinase, substrate binding domain | 0.58 | 49.0 | 4.59e-01 | 90.7% | 96.7% |
| 1kzfA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.58 | 45.0 | 3.39e-01 | 85.3% | 98.5% |
| 1u6zA02 | 3.30.420.150 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 | 0.58 | 45.0 | 3.41e-01 | 84.0% | 88.3% |
| 4fvkA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.58 | 45.0 | 2.90e-01 | 85.3% | 71.4% |
| 3v0rA01 | 2.40.350.20 | Mainly Beta › Beta Barrel › AOC barrel-like › | 0.57 | 44.0 | 3.91e-01 | 88.0% | 92.5% |
| 4r03A00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.57 | 42.0 | 3.72e-01 | 78.7% | 100.0% |
| 5bp3B00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.56 | 46.0 | 3.08e-01 | 88.0% | 67.4% |
| 4g59B00 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.56 | 47.0 | 3.73e-01 | 94.7% | 50.3% |
| 2arhA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.55 | 44.0 | 3.57e-01 | 90.7% | 53.2% |
| 1inyA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.55 | 44.0 | 2.83e-01 | 88.0% | 68.3% |
| 4k3yC00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.55 | 45.0 | 2.93e-01 | 90.7% | 86.5% |
| 1e3dB00 | 1.10.645.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome-c3 Hydrogenase; chain B › Cytochrome-c3 Hydrogenase, chain B | 0.55 | 41.0 | 2.52e-01 | 82.7% | 88.6% |
| 2p1jA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.55 | 42.0 | 3.50e-01 | 84.0% | 81.2% |
| 2l3tA02 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.55 | 40.0 | 3.68e-01 | 85.3% | 59.0% |
| 1gutA00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.54 | 37.0 | 3.84e-01 | 100.0% | 79.1% |
| 3s24A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 35.0 | 3.31e-01 | 97.3% | 53.2% |
| 3up1B01 | 2.60.40.1870 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 43.0 | 4.02e-01 | 88.0% | 76.3% |
| 2qkbA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.53 | 43.0 | 3.55e-01 | 93.3% | 90.1% |
| 4cu7A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 42.0 | 3.67e-01 | 90.7% | 98.3% |
| 5dzeA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 45.0 | 3.34e-01 | 96.0% | 57.8% |
| 4ywrA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.53 | 41.0 | 2.97e-01 | 86.7% | 64.0% |
| 2wsuA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 44.0 | 3.68e-01 | 96.0% | 64.7% |
| 1j6uA02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.52 | 39.0 | 2.92e-01 | 81.3% | 49.3% |
| 1s0wC01 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.52 | 39.0 | 3.73e-01 | 81.3% | 92.3% |
| 1e3hA03 | 3.30.230.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain | 0.52 | 37.0 | 2.78e-01 | 76.0% | 63.4% |
| 3zsjA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 43.0 | 3.63e-01 | 94.7% | 82.6% |
| 5khaB01 | 3.60.110.10 | Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase | 0.52 | 44.0 | 3.09e-01 | 96.0% | 90.4% |
| 3df7A02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.52 | 40.0 | 3.36e-01 | 86.7% | 51.8% |
| 7rskA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 40.0 | 3.68e-01 | 90.7% | 100.0% |
| 6e20A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 43.0 | 3.60e-01 | 94.7% | 86.4% |
| 3vv1A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 42.0 | 3.54e-01 | 96.0% | 77.3% |
| 4h3uA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 39.0 | 3.30e-01 | 84.0% | 60.0% |
| 1a78A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 43.0 | 3.59e-01 | 96.0% | 85.1% |
| 4d8mA03 | 2.100.10.40 | Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › | 0.51 | 38.0 | 2.95e-01 | 85.3% | 96.0% |
| 4ozxA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 41.0 | 2.90e-01 | 97.3% | 43.2% |
| 3wucB00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 42.0 | 3.55e-01 | 96.0% | 82.5% |
| 4b63A00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.50 | 43.0 | 2.68e-01 | 96.0% | 80.0% |
ECOD (68)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 223843 | 3629.1.1.1 ↗ | beta sandwiches › Tail sheath protein beta-sandwich domain › Tail sheath protein beta-sandwich domain › Tail sheath protein beta-sandwich domain › Phage_sheath_domII | 0.89 | 79.0 | 7.35e-01 | 100.0% | 78.7% |
| 1176366 | 3629.1.1.1 ↗ | beta sandwiches › Tail sheath protein beta-sandwich domain › Tail sheath protein beta-sandwich domain › Tail sheath protein beta-sandwich domain › Phage_sheath_domII | 0.87 | 79.0 | 7.25e-01 | 100.0% | 77.4% |
| 4386515 | 330.1.1.30 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › PF27148 | 0.72 | 54.0 | 5.82e-01 | 80.0% | 98.5% |
| 3931156 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.71 | 54.0 | 5.61e-01 | 80.0% | 91.4% |
| 3705941 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.69 | 54.0 | 5.29e-01 | 82.7% | 86.3% |
| 3788141 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.69 | 51.0 | 5.15e-01 | 80.0% | 78.7% |
| 3728854 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.69 | 52.0 | 5.52e-01 | 80.0% | 92.3% |
| 4106397 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.68 | 52.0 | 5.21e-01 | 81.3% | 81.3% |
| 4194213 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.67 | 51.0 | 5.24e-01 | 80.0% | 91.4% |
| 4076949 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.67 | 51.0 | 5.25e-01 | 80.0% | 87.1% |
| 3456045 | 292.1.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Ribosome inactivating proteins (RIP) › Ribosome inactivating proteins (RIP) › RIP | 0.66 | 50.0 | 3.37e-01 | 80.0% | 40.4% |
| 136506 | 4075.1.1.2 ↗ | a+b complex topology › RGC domain › RGC domain › RGC domain › PF29130 | 0.65 | 55.0 | 5.07e-01 | 94.7% | 81.8% |
| 3258441 | 234.3.1.0 ↗ | a+b two layers › Microbial ribonucleases-like › Colicin D nuclease domain › Colicin D nuclease domain | 0.65 | 44.0 | 4.45e-01 | 80.0% | 69.3% |
| 3435374 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.64 | 48.0 | 4.67e-01 | 80.0% | 74.1% |
| 3748189 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.64 | 48.0 | 4.73e-01 | 80.0% | 76.2% |
| 5003437 | 5090.1.1.6 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › S-layer | 0.64 | 52.0 | 4.12e-01 | 89.3% | 60.0% |
| 3388157 | 2484.1.1.262 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27037 | 0.63 | 49.0 | 3.74e-01 | 84.0% | 87.7% |
| 5022396 | 3459.1.1.0 ↗ | beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule | 0.63 | 54.0 | 5.29e-01 | 93.3% | 90.0% |
| 3580950 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.62 | 51.0 | 3.44e-01 | 88.0% | 58.5% |
| 5019700 | 5090.1.1.6 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › S-layer | 0.62 | 52.0 | 4.72e-01 | 90.7% | 85.0% |
| 4986321 | 5090.1.1.6 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › S-layer | 0.62 | 52.0 | 4.07e-01 | 92.0% | 68.8% |
| 6599 | 233.1.1.0 ↗ | a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain | 0.62 | 49.0 | 4.17e-01 | 86.7% | 71.8% |
| 3898432 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.61 | 46.0 | 4.32e-01 | 80.0% | 72.2% |
| 3921013 | 3735.1.1.0 ↗ | beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein | 0.61 | 48.0 | 2.60e-01 | 84.0% | 62.5% |
| 3838239 | 2484.1.1.262 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27037 | 0.61 | 48.0 | 3.66e-01 | 84.0% | 89.4% |
| 3930408 | 2484.5.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH | 0.60 | 46.0 | 4.54e-01 | 81.3% | 96.2% |
| 4494257 | 2484.1.1.55 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH_dom | 0.60 | 49.0 | 3.77e-01 | 90.7% | 85.0% |
| 5021465 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.60 | 46.0 | 3.15e-01 | 82.7% | 77.1% |
| 3915512 | 3735.1.1.14 ↗ | beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › TEN_YD-shell | 0.60 | 50.0 | 2.77e-01 | 89.3% | 97.9% |
| 3781393 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.59 | 45.0 | 4.34e-01 | 81.3% | 98.8% |
| 4968129 | 11.1.1.1424 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7490 | 0.59 | 45.0 | 4.05e-01 | 82.7% | 98.1% |
| 3253869 | 4291.1.1.1 ↗ | beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP | 0.59 | 47.0 | 3.04e-01 | 88.0% | 58.9% |
| 4031781 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.58 | 47.0 | 3.61e-01 | 90.7% | 96.1% |
| 3592050 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 49.0 | 4.07e-01 | 94.7% | 88.1% |
| 3508171 | 3392.1.1.1 ↗ | a+b two layers › Cytoplasmic domain of BfpC › Cytoplasmic domain of BfpC › Cytoplasmic domain of BfpC › PAP_PilO | 0.57 | 43.0 | 3.41e-01 | 82.7% | 45.5% |
| 3934135 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.57 | 48.0 | 3.94e-01 | 90.7% | 77.7% |
| 3882076 | 2484.1.1.109 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › bVLRF1 | 0.57 | 45.0 | 3.25e-01 | 86.7% | 61.3% |
| 3301455 | 2484.1.1.109 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › bVLRF1 | 0.57 | 45.0 | 3.35e-01 | 86.7% | 69.7% |
| 3574387 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.57 | 50.0 | 3.32e-01 | 100.0% | 84.8% |
| 3940074 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.56 | 44.0 | 3.63e-01 | 85.3% | 92.1% |
| 4026182 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.56 | 47.0 | 3.50e-01 | 90.7% | 86.5% |
| 4944430 | 244.3.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU | 0.56 | 47.0 | 4.63e-01 | 96.0% | 88.7% |
| 3169953 | 2484.5.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase | 0.56 | 46.0 | 3.59e-01 | 90.7% | 75.8% |
| 3176331 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.56 | 47.0 | 3.63e-01 | 92.0% | 75.8% |
| 4981542 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 51.0 | 3.93e-01 | 100.0% | 60.0% |
| 4505130 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.56 | 46.0 | 3.91e-01 | 90.7% | 82.4% |
| 5032936 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.55 | 40.0 | 3.24e-01 | 77.3% | 66.4% |
| 3787114 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.55 | 45.0 | 3.46e-01 | 92.0% | 90.8% |
| 4121524 | 304.125.1.1 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in Api92-like proteins › ferredoxin-like domain in Api92-like proteins › DUF1281_C | 0.55 | 40.0 | 3.38e-01 | 80.0% | 45.3% |
| 3801721 | 7089.1.1.0 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD | 0.55 | 45.0 | 4.12e-01 | 86.7% | 88.4% |
| 3197358 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 44.0 | 3.32e-01 | 92.0% | 99.5% |
| 3515504 | 2.1.1.12 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S28e | 0.55 | 33.0 | 3.61e-01 | 98.7% | 76.3% |
| 5081360 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 44.0 | 3.84e-01 | 90.7% | 90.8% |
| 3222257 | 2484.1.1.109 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › bVLRF1 | 0.55 | 42.0 | 3.35e-01 | 84.0% | 83.7% |
| 4243201 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.54 | 46.0 | 3.42e-01 | 92.0% | 60.0% |
| 3510894 | 844.1.1.1 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Tub | 0.54 | 47.0 | 3.40e-01 | 100.0% | 87.4% |
| 4451022 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 46.0 | 4.02e-01 | 100.0% | 75.8% |
| 3974719 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.53 | 35.0 | 3.14e-01 | 100.0% | 45.9% |
| 3706725 | 2484.1.1.109 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › bVLRF1 | 0.53 | 43.0 | 3.33e-01 | 90.7% | 88.3% |
| 3592277 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.53 | 46.0 | 3.48e-01 | 97.3% | 89.7% |
| 3787121 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.53 | 43.0 | 3.62e-01 | 88.0% | 74.4% |
| 2722036 | 10.1.1.4 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin | 0.52 | 43.0 | 3.57e-01 | 94.7% | 80.9% |
| 4990901 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.51 | 39.0 | 4.07e-01 | 84.0% | 92.9% |
| 3988496 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.51 | 42.0 | 3.06e-01 | 90.7% | 51.6% |
| 3970344 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.51 | 35.0 | 3.10e-01 | 100.0% | 45.8% |
| 3487802 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.51 | 35.0 | 2.68e-01 | 72.0% | 85.4% |
| 4032029 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.51 | 37.0 | 3.49e-01 | 80.0% | 85.3% |
| 1544904 | 10.1.1.4 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin | 0.50 | 42.0 | 3.55e-01 | 96.0% | 82.5% |
D3
medium
residues 381-448
Domain cluster:
rep: OQ627803.1__WFD52849.1__X__00001__D2-77
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17482.8 best | Phage_sheath_1C | 52.4 | 6.50e-14 | 100.0% | 66.3% |
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hxlA05 | 3.30.360.90 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › | 0.97 | 76.0 | 7.63e-01 | 82.4% | 79.7% |
| 3lmlA01 | 3.10.450.690 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.96 | 76.0 | 6.07e-01 | 82.4% | 47.1% |
| 6lmjB00 | 4.10.520.10 | Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins | 0.72 | 40.0 | 3.53e-01 | 80.9% | 38.8% |
| 4ebgA00 | 3.10.450.560 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.69 | 51.0 | 4.55e-01 | 79.4% | 57.7% |
| 4k3cA01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.67 | 48.0 | 4.56e-01 | 80.9% | 63.4% |
| 1ni4A00 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.67 | 50.0 | 3.12e-01 | 79.4% | 21.8% |
| 3ahpA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 46.0 | 3.95e-01 | 73.5% | 84.9% |
| 1n91A00 | 3.30.1200.10 | Alpha Beta › 2-Layer Sandwich › Conserved Hypothetical Protein Mth637; Chain: A; › YggU-like | 0.65 | 42.0 | 3.60e-01 | 79.4% | 40.7% |
| 2nlvA00 | 3.30.310.110 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like | 0.64 | 47.0 | 3.93e-01 | 86.8% | 46.4% |
| 1z2zA02 | 3.30.70.3160 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 40.0 | 3.62e-01 | 79.4% | 48.9% |
| 3wpwA00 | 3.30.1330.60 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain | 0.62 | 45.0 | 3.51e-01 | 77.9% | 69.1% |
| 1oi2A02 | 3.30.1180.20 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › Dihydroxyacetone kinase; domain 2 | 0.61 | 42.0 | 3.26e-01 | 77.9% | 30.2% |
| 7sk7A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.61 | 47.0 | 3.19e-01 | 82.4% | 98.4% |
| 3akjA02 | 1.10.1070.20 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › | 0.61 | 48.0 | 3.54e-01 | 89.7% | 33.3% |
| 2im5A00 | 3.20.140.10 | Alpha Beta › Alpha-Beta Barrel › nicotinate phosphoribosyltransferase › nicotinate phosphoribosyltransferase | 0.60 | 47.0 | 2.96e-01 | 86.8% | 51.2% |
| 2pe4A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.59 | 44.0 | 2.72e-01 | 80.9% | 85.4% |
| 4k3bA03 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.59 | 44.0 | 4.08e-01 | 83.8% | 100.0% |
| 2qdfA03 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.58 | 43.0 | 4.22e-01 | 82.4% | 100.0% |
| 2x8xX03 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.58 | 43.0 | 4.09e-01 | 82.4% | 100.0% |
| 1s7iA00 | 3.30.70.1060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel | 0.57 | 45.0 | 3.75e-01 | 88.2% | 83.1% |
| 3rauA00 | 1.25.40.280 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › alix/aip1 like domains | 0.56 | 44.0 | 2.73e-01 | 82.4% | 30.2% |
| 3c18A03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 31.0 | 3.39e-01 | 70.6% | 66.7% |
| 2xliA01 | 3.30.70.2540 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › CRISPR-associated endoribonuclease Cas6/Csy4 | 0.53 | 41.0 | 3.14e-01 | 82.4% | 36.5% |
| 2iz4A02 | 2.20.25.590 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.53 | 28.0 | 3.26e-01 | 75.0% | 71.4% |
| 2lkzA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.53 | 37.0 | 3.46e-01 | 75.0% | 58.8% |
| 1uouA03 | 3.90.1170.30 | Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › Pyrimidine nucleoside phosphorylase-like, C-terminal domain | 0.52 | 37.0 | 3.42e-01 | 83.8% | 57.3% |
| 4kmaA02 | 3.30.1360.230 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Sufu, C-terminal domain | 0.52 | 32.0 | 2.67e-01 | 75.0% | 35.3% |
| 1l3wA03 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.52 | 34.0 | 2.93e-01 | 88.2% | 39.5% |
| 2p4wA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 40.0 | 3.42e-01 | 80.9% | 63.1% |
| 1whrA00 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.51 | 38.0 | 3.09e-01 | 79.4% | 53.2% |
| 6pzjA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 36.0 | 2.85e-01 | 76.5% | 88.5% |
| 3rhtA00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.50 | 35.0 | 2.40e-01 | 72.1% | 34.5% |
| 1vq0A02 | 3.90.1280.10 | Alpha Beta › Alpha-Beta Complex › CBS domain Like › HSP33 redox switch-like | 0.50 | 30.0 | 3.21e-01 | 70.6% | 68.4% |
| 2ix2B00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.50 | 38.0 | 2.64e-01 | 83.8% | 99.2% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 386335 | 283.2.1.2 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C | 0.96 | 76.0 | 6.20e-01 | 82.4% | 50.0% |
| 3701534 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.78 | 45.0 | 3.70e-01 | 79.4% | 33.9% |
| 4183868 | 878.1.1.1 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 | 0.77 | 55.0 | 5.28e-01 | 80.9% | 64.6% |
| 5049587 | 304.6.1.0 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain | 0.65 | 49.0 | 3.36e-01 | 83.8% | 21.9% |
| 3899209 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.64 | 51.0 | 3.72e-01 | 88.2% | 60.5% |
| 3262513 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.62 | 42.0 | 3.54e-01 | 88.2% | 40.0% |
| 5018045 | 325.1.4.3 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Nicotinate/Quinolinate PRTase N-terminal domain-like › NAPRTase_N | 0.62 | 46.0 | 3.58e-01 | 80.9% | 48.4% |
| 4024239 | 304.151.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase | 0.62 | 47.0 | 3.85e-01 | 82.4% | 50.4% |
| 1820952 | 304.102.1.2 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruD | 0.61 | 38.0 | 2.87e-01 | 79.4% | 25.6% |
| 3596149 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.60 | 41.0 | 3.49e-01 | 80.9% | 40.8% |
| 3231858 | 304.8.1.72 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › SCVP | 0.60 | 45.0 | 4.00e-01 | 79.4% | 62.0% |
| 4605063 | 304.102.1.1 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_2 | 0.60 | 43.0 | 2.84e-01 | 75.0% | 20.4% |
| 4182510 | 812.1.1.1 ↗ | a+b duplicates or obligate multimers › MinE-like › Cell division protein MinE topological specificity domain › Cell division protein MinE topological specificity domain › MinE | 0.60 | 44.0 | 4.16e-01 | 85.3% | 63.3% |
| 4456367 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.60 | 39.0 | 3.23e-01 | 77.9% | 36.0% |
| 3322497 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.58 | 41.0 | 4.00e-01 | 77.9% | 65.0% |
| 3235660 | 304.151.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › PF25899 | 0.57 | 44.0 | 3.67e-01 | 85.3% | 56.8% |
| 5172 | 304.4.1.3 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › YCII | 0.57 | 45.0 | 3.75e-01 | 88.2% | 83.1% |
| 3604663 | 304.51.1.1 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas_Cas6_C | 0.57 | 42.0 | 3.46e-01 | 79.4% | 68.5% |
| 5039979 | 604.2.1.1 ↗ | alpha bundles › Spectrin repeat-like › Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain › Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain › Succ_DH_flav_C | 0.57 | 40.0 | 3.29e-01 | 76.5% | 62.2% |
| 3817267 | 4.25.1.0 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain | 0.55 | 40.0 | 3.67e-01 | 79.4% | 87.4% |
| 3582934 | 1.1.2.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › RNA_pol_Rpb2_6 | 0.54 | 33.0 | 2.93e-01 | 77.9% | 42.0% |
| 1170456 | 63.1.1.1 ↗ | beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › CIMR | 0.53 | 38.0 | 3.48e-01 | 79.4% | 87.0% |
| 3238722 | 2003.1.2.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like | 0.53 | 35.0 | 2.34e-01 | 73.5% | 14.6% |
| 3971910 | 5069.1.1.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes | 0.53 | 42.0 | 2.86e-01 | 91.2% | 57.9% |
| 3373362 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 39.0 | 2.26e-01 | 77.9% | 17.1% |
| 3703996 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.53 | 36.0 | 2.83e-01 | 72.1% | 34.4% |
| 5083737 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.53 | 36.0 | 2.78e-01 | 70.6% | 90.7% |
| 3628236 | 4291.1.1.1 ↗ | beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP | 0.53 | 40.0 | 2.56e-01 | 88.2% | 35.2% |
| 3643192 | 207.1.1.60 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRRNT_2,LRR_8 | 0.52 | 36.0 | 2.69e-01 | 72.1% | 41.1% |
| 5044559 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.52 | 36.0 | 3.49e-01 | 89.7% | 62.5% |
| 3961814 | 604.2.1.1 ↗ | alpha bundles › Spectrin repeat-like › Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain › Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain › Succ_DH_flav_C | 0.52 | 38.0 | 3.05e-01 | 79.4% | 64.1% |
| 3502058 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.51 | 37.0 | 3.77e-01 | 75.0% | 92.3% |
| 4971494 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 40.0 | 3.38e-01 | 91.2% | 50.4% |
| 4026378 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 41.0 | 2.74e-01 | 86.8% | 26.7% |
| 3721652 | 5.1.5.126 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_VPS8 | 0.51 | 41.0 | 2.54e-01 | 89.7% | 65.6% |
| 3387986 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.51 | 37.0 | 2.51e-01 | 76.5% | 23.3% |