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IMGVR_UViG_3300012985_000390-3300012985-Ga0164308_100142421
Arc-VirIMGVR_UViG_3300012985_000390-3300012985-Ga0164308_100142421
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 17-72
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2il5A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.72 | 65.0 | 4.59e-01 | 100.0% | 40.1% |
| 5mu3B00 | 3.40.50.12050 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.72 | 51.0 | 3.71e-01 | 76.8% | 28.8% |
| 1kyqA02 | 3.30.160.110 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Sirohaem synthase, central domain | 0.68 | 39.0 | 4.60e-01 | 75.0% | 86.5% |
| 3h4zB03 | 3.15.10.50 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › | 0.62 | 54.0 | 3.75e-01 | 100.0% | 37.7% |
| 6dlzA01 | 1.20.140.150 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › | 0.59 | 51.0 | 3.59e-01 | 98.2% | 69.6% |
| 3ng7X01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.58 | 39.0 | 2.71e-01 | 89.3% | 18.6% |
| 1p9oA00 | 3.40.50.10300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CoaB-like | 0.53 | 43.0 | 2.74e-01 | 87.5% | 53.9% |
| 1k1gA00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.50 | 41.0 | 3.24e-01 | 92.9% | 81.1% |
| 4r9iA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.50 | 36.0 | 3.14e-01 | 87.5% | 46.0% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4980468 | 2484.1.1.338 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › baeRF_family10 | 0.78 | 60.0 | 4.47e-01 | 82.1% | 50.8% |
| 3496461 | 305.1.1.0 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase | 0.70 | 61.0 | 4.58e-01 | 100.0% | 93.8% |
| 5007978 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.61 | 50.0 | 3.83e-01 | 100.0% | 39.3% |
| 3275766 | 2007.2.3.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Syja_N | 0.60 | 48.0 | 3.02e-01 | 89.3% | 22.9% |
| 3546411 | 298.1.1.0 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0.60 | 47.0 | 2.90e-01 | 85.7% | 52.7% |
| 1276875 | 210.2.1.2 ↗ | a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › SpoIIE | 0.56 | 39.0 | 2.63e-01 | 75.0% | 23.8% |
D2
high
residues 76-287
Domain cluster:
rep: CAKLQF020000009.1__CAH1083340.1__SAMEA5780031_01945__00040__D11-198
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00211.26 best | Guanylate_cyc | 58.2 | 1.20e-15 | 92.5% | 93.4% |