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IMGVR_UViG_3300012991_000317-3300012991-Ga0157148_10000928

Arc-Vir

IMGVR_UViG_3300012991_000317-3300012991-Ga0157148_10000928

Quality

78.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 132-182
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF10668.15 best Phage_terminase 24.7 2.20e-05 100.0% 68.7%
CATH (83)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2x4hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 74.0 5.44e-01 98.0% 48.1%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 74.0 6.59e-01 98.0% 87.5%
4o5vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 71.0 6.35e-01 94.1% 85.9%
4u7bA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 59.0 6.50e-01 78.4% 100.0%
1zarA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 71.0 5.94e-01 100.0% 74.2%
1lnwF01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 71.0 5.32e-01 100.0% 47.6%
5y6iA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 69.0 6.15e-01 98.0% 84.9%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 70.0 5.21e-01 100.0% 47.3%
4ijaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 70.0 6.53e-01 98.0% 100.0%
4jp0A03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.80 51.0 5.88e-01 74.5% 100.0%
2nyxB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 69.0 5.02e-01 100.0% 46.5%
2wteA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 70.0 6.26e-01 100.0% 84.7%
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 60.0 5.53e-01 88.2% 63.6%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 68.0 6.86e-01 98.0% 98.0%
4wcgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 69.0 6.54e-01 98.0% 98.4%
1z05A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 69.0 6.22e-01 100.0% 100.0%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 70.0 5.54e-01 100.0% 66.3%
2xrnB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 67.0 6.31e-01 98.0% 95.3%
2x48A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.78 54.0 5.32e-01 80.4% 68.5%
2e7xA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 68.0 6.80e-01 96.1% 98.1%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 69.0 6.65e-01 100.0% 94.8%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 70.0 6.86e-01 100.0% 94.4%
3on4D00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.78 66.0 4.47e-01 96.1% 30.3%
4kmfA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 67.0 6.34e-01 98.0% 100.0%
5y2vC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 65.0 5.51e-01 94.1% 68.2%
2dk5A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 65.0 6.01e-01 96.1% 100.0%
6oinA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 67.0 6.15e-01 98.0% 94.0%
3fxqB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 68.0 5.63e-01 100.0% 71.1%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 63.0 6.36e-01 90.2% 96.0%
7l1iA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 67.0 4.78e-01 100.0% 43.1%
3lmmB05 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 63.0 5.97e-01 90.2% 78.7%
8agaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 66.0 5.02e-01 100.0% 52.4%
3r4kB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 66.0 6.23e-01 98.0% 96.8%
3fm5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 67.0 4.98e-01 100.0% 43.1%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 66.0 6.11e-01 98.0% 77.6%
3bddD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 66.0 4.93e-01 100.0% 47.7%
3g3zA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 64.0 5.96e-01 94.1% 100.0%
2hr3D02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 66.0 6.21e-01 98.0% 98.4%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 67.0 6.29e-01 100.0% 87.3%
5jbrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 65.0 5.57e-01 100.0% 77.9%
3npiB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.76 64.0 4.22e-01 94.1% 55.2%
6pcoC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 65.0 4.88e-01 100.0% 50.8%
1tc3C00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.76 56.0 5.65e-01 84.3% 78.4%
1b9mB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 66.0 5.37e-01 100.0% 62.6%
3bj6B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 65.0 4.70e-01 100.0% 43.7%
2rasA01 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.76 65.0 4.40e-01 100.0% 30.9%
3gw2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 65.0 5.41e-01 100.0% 68.8%
2yveB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.75 63.0 4.38e-01 96.1% 64.0%
1j5yA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 65.0 6.09e-01 98.0% 93.8%
2r0qC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.75 59.0 5.74e-01 84.3% 87.3%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 59.0 5.71e-01 88.2% 84.5%
3e6mA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 64.0 4.67e-01 100.0% 43.2%
2v9vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 61.0 5.81e-01 92.2% 78.3%
2fbhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 64.0 4.75e-01 100.0% 49.6%
3cuoD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 64.0 5.28e-01 100.0% 69.1%
2qtqB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.74 60.0 4.09e-01 94.1% 60.4%
2p5vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 61.0 6.16e-01 96.1% 94.2%
3r0aA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 63.0 4.85e-01 100.0% 60.8%
3szpA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 64.0 5.34e-01 100.0% 70.8%
7cluA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 61.0 5.19e-01 100.0% 69.7%
4a0zA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 61.0 5.85e-01 96.1% 89.8%
2dt5B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 61.0 5.50e-01 98.0% 91.8%
2dg8D00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.72 58.0 4.12e-01 96.1% 67.1%
3htaC00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.72 59.0 4.08e-01 98.0% 29.6%
2oerA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.71 58.0 4.07e-01 96.1% 27.4%
3f1bA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.71 60.0 4.18e-01 100.0% 31.1%
2qwtA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.71 61.0 4.30e-01 100.0% 65.3%
5cvrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 59.0 5.04e-01 94.1% 83.3%
1rr7A02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 55.0 5.67e-01 92.2% 91.7%
1r7jA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 57.0 4.82e-01 94.1% 64.4%
3keoA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 61.0 5.47e-01 100.0% 93.1%
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.69 59.0 4.52e-01 100.0% 65.1%
1qb2A00 1.10.260.30 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › Signal recognition particle, SRP54 subunit, M-domain 0.69 57.0 4.50e-01 92.2% 75.5%
4ivnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 58.0 5.22e-01 100.0% 84.2%
2o3fA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 58.0 5.07e-01 100.0% 79.3%
3d0sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 57.0 4.97e-01 96.1% 85.0%
1r71A01 1.10.10.730 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain 0.68 54.0 5.25e-01 88.2% 78.6%
3mklA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 55.0 4.51e-01 96.1% 88.5%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 53.0 5.26e-01 96.1% 89.3%
2ao9I01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 54.0 4.67e-01 100.0% 58.6%
7ml0M01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.63 50.0 4.39e-01 92.2% 61.0%
2imfA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.59 50.0 3.40e-01 100.0% 67.5%
1wwiA00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.55 44.0 3.31e-01 96.1% 84.4%
ECOD (95)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5072420 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.84 73.0 7.36e-01 94.1% 96.0%
3244316 101.1.1.67 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_6 0.82 65.0 5.99e-01 88.2% 67.7%
4975588 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 72.0 6.69e-01 100.0% 95.4%
4944620 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 71.0 7.00e-01 98.0% 94.5%
4945048 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 69.0 6.81e-01 100.0% 90.9%
5082754 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.80 70.0 6.69e-01 98.0% 83.3%
3929142 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 65.0 6.19e-01 90.2% 81.7%
5048236 314.1.1.3 a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2d 0.80 69.0 4.14e-01 100.0% 19.2%
4026891 101.1.15.1 alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS 0.80 68.0 5.57e-01 94.1% 63.3%
5012421 101.1.2.889 alpha arrays › HTH › HTH › winged helix domain › Arc_trans_TRASH 0.79 69.0 5.46e-01 98.0% 49.5%
3288926 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.79 69.0 5.00e-01 100.0% 46.9%
5036798 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 67.0 6.54e-01 94.1% 87.3%
3988605 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 70.0 6.02e-01 100.0% 88.7%
4977106 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.79 70.0 6.45e-01 98.0% 78.5%
4933352 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.79 69.0 6.75e-01 98.0% 90.9%
4979740 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.79 69.0 6.40e-01 98.0% 78.5%
4945141 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 67.0 6.60e-01 98.0% 89.1%
3877773 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 64.0 5.87e-01 90.2% 69.2%
3926999 101.1.15.0 alpha arrays › HTH › HTH › HAT1, C-terminal domain 0.79 68.0 5.70e-01 96.1% 77.6%
4958809 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.79 69.0 5.81e-01 98.0% 61.2%
5030106 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.79 69.0 6.76e-01 98.0% 94.5%
4985252 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.79 70.0 6.48e-01 100.0% 78.5%
3955994 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.79 67.0 5.70e-01 98.0% 88.2%
5011763 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.78 69.0 6.77e-01 98.0% 92.7%
3279510 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.78 67.0 6.39e-01 96.1% 83.3%
4931184 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.78 68.0 6.66e-01 98.0% 94.5%
4984666 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.78 69.0 6.10e-01 100.0% 88.0%
4962128 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.78 68.0 6.15e-01 98.0% 74.3%
4941943 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.78 67.0 6.43e-01 98.0% 86.7%
5077992 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 70.0 6.09e-01 100.0% 68.0%
5042455 101.1.2.92 alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.78 67.0 5.17e-01 100.0% 58.8%
5039985 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 68.0 6.34e-01 100.0% 80.0%
4980888 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 66.0 6.19e-01 100.0% 76.9%
5055912 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 68.0 6.16e-01 100.0% 88.6%
4979728 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 69.0 5.80e-01 100.0% 60.0%
4439631 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.78 67.0 6.60e-01 98.0% 94.5%
4947593 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 68.0 6.72e-01 100.0% 92.7%
4993982 101.1.2.650 alpha arrays › HTH › HTH › winged helix domain › DUF7343 0.77 67.0 5.55e-01 100.0% 69.1%
4978146 101.1.1.62 alpha arrays › HTH › HTH › Three-helical HTH › HTH_24 0.77 68.0 6.17e-01 100.0% 74.3%
4983292 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 68.0 5.57e-01 100.0% 68.4%
3289818 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.77 66.0 4.99e-01 100.0% 51.5%
4979724 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 67.0 6.23e-01 98.0% 78.5%
5062184 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.77 66.0 6.34e-01 100.0% 83.3%
5068679 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.77 66.0 6.53e-01 98.0% 90.9%
4965902 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 67.0 5.35e-01 100.0% 55.2%
5072288 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 67.0 5.81e-01 100.0% 80.0%
4557681 101.1.2.92 alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.77 67.0 5.81e-01 100.0% 87.5%
4939103 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.77 66.0 5.89e-01 100.0% 86.7%
5010215 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.77 69.0 6.53e-01 100.0% 86.7%
5030108 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.77 66.0 6.44e-01 96.1% 92.7%
3952144 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.77 66.0 6.12e-01 98.0% 80.0%
5031878 101.1.2.110 alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.77 64.0 6.16e-01 96.1% 100.0%
5058496 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.77 68.0 6.11e-01 100.0% 72.9%
5030813 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.77 64.0 6.44e-01 92.2% 98.0%
5044109 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.76 66.0 5.98e-01 98.0% 71.4%
5047085 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 67.0 5.78e-01 100.0% 63.7%
3282258 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.76 65.0 5.93e-01 98.0% 74.3%
5062343 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 64.0 6.47e-01 92.2% 94.0%
4993585 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 61.0 5.83e-01 94.1% 76.7%
3289544 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.76 65.0 6.08e-01 98.0% 80.0%
4955429 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.76 66.0 6.30e-01 98.0% 88.3%
4961377 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.76 65.0 5.92e-01 98.0% 72.9%
5074566 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 66.0 6.15e-01 100.0% 92.3%
4929413 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.76 65.0 5.50e-01 98.0% 60.0%
4990239 101.1.2.210 alpha arrays › HTH › HTH › winged helix domain › CggR_N 0.76 65.0 5.78e-01 100.0% 81.3%
4990227 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.76 63.0 6.06e-01 96.1% 81.7%
3279531 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.76 67.0 6.59e-01 100.0% 96.4%
4956336 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.75 65.0 5.29e-01 100.0% 66.0%
4965036 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.75 64.0 5.01e-01 100.0% 63.5%
5077219 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 63.0 5.86e-01 98.0% 75.4%
3783199 101.1.1.57 alpha arrays › HTH › HTH › Three-helical HTH › MRP-L20 0.75 58.0 4.11e-01 88.2% 27.2%
5047333 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 64.0 5.36e-01 100.0% 55.6%
5033230 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.75 65.0 6.40e-01 98.0% 96.4%
5076741 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.75 65.0 6.61e-01 100.0% 100.0%
5032612 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 64.0 6.34e-01 98.0% 98.2%
5025905 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 64.0 5.60e-01 100.0% 77.5%
4971366 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 62.0 5.55e-01 98.0% 65.3%
4942939 101.1.2.110 alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.74 62.0 5.69e-01 98.0% 90.0%
2572 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.74 63.0 5.98e-01 98.0% 82.5%
5055914 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 64.0 6.33e-01 100.0% 94.5%
4927482 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.74 63.0 6.40e-01 98.0% 100.0%
5028932 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.74 63.0 6.04e-01 98.0% 86.7%
5047003 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.74 64.0 5.82e-01 100.0% 97.1%
5046862 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.73 62.0 5.71e-01 100.0% 87.1%
5073937 101.1.2.899 alpha arrays › HTH › HTH › winged helix domain › Zn_Ribbon_1 0.73 59.0 4.57e-01 94.1% 40.0%
4979948 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 63.0 6.17e-01 100.0% 94.5%
5047331 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 62.0 5.26e-01 100.0% 56.7%
5031872 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 61.0 5.85e-01 98.0% 86.7%
4943799 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 58.0 5.92e-01 92.2% 98.0%
4233438 101.1.1.226 alpha arrays › HTH › HTH › Three-helical HTH › UPF0240 0.71 56.0 5.20e-01 86.3% 69.2%
3676725 101.1.1.57 alpha arrays › HTH › HTH › Three-helical HTH › MRP-L20 0.71 58.0 4.53e-01 90.2% 41.8%
3271918 101.1.1.201 alpha arrays › HTH › HTH › Three-helical HTH › Bot1p 0.71 57.0 5.21e-01 90.2% 65.7%
3279079 101.1.1.5 alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.71 58.0 5.19e-01 100.0% 72.5%
3979470 101.1.2.110 alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.69 57.0 5.07e-01 100.0% 76.2%
3282956 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.67 54.0 5.36e-01 94.1% 92.7%
D2 medium residues 1-78
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13392.13 best HNH_3 41.2 1.40e-10 60.3% 93.5%
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1u3eM01 3.90.75.20 Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › 0.81 72.0 6.39e-01 94.9% 77.4%
1a73A00 3.90.75.10 Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › Homing Intron 3 (I-ppo) Encoded Endonuclease; Chain A 0.71 63.0 4.99e-01 100.0% 48.1%
2ckkA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.55 33.0 3.80e-01 79.5% 84.2%
4gp0B02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.53 37.0 3.28e-01 74.4% 95.9%
1jqvA02 2.30.26.10 Mainly Beta › Roll › Dihydroorotate Dehydrogenase A; chain A, domain 2 › Dihydroorotate Dehydrogenase A, chain A, domain 2 0.51 24.0 2.94e-01 85.9% 68.2%
3bqjA01 2.40.510.10 Mainly Beta › Beta Barrel › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Positive stranded ssRNA viruses 0.51 41.0 3.21e-01 94.9% 94.4%
4g7nA02 3.30.1120.130 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.50 35.0 3.30e-01 88.5% 58.8%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3266965 378.1.2.2 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › Inactive Tox-GHH domain of teneurin › HNH_3 0.91 71.0 7.82e-01 82.1% 100.0%
5053631 378.1.1.19 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_3 0.87 70.0 6.12e-01 84.6% 89.1%
3586841 378.1.1.7 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › NUMOD4,HNH_3 0.83 74.0 6.38e-01 94.9% 82.6%
3539740 378.1.1.19 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_3 0.83 78.0 6.49e-01 100.0% 76.0%
3965202 378.1.1.19 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_3 0.82 72.0 6.31e-01 93.6% 85.5%
89916 378.1.1.0 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.71 63.0 5.00e-01 100.0% 48.1%
8233 378.1.1.6 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › zf-His_Me_endon 0.71 63.0 4.99e-01 100.0% 48.1%
4949181 378.1.1.2 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH 0.68 49.0 5.07e-01 75.6% 78.7%
2628026 378.1.1.0 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.65 50.0 3.66e-01 80.8% 33.7%
3218708 378.1.2.1 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › Inactive Tox-GHH domain of teneurin › Tox-GHH 0.65 45.0 4.62e-01 71.8% 100.0%
3695527 378.1.1.6 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › zf-His_Me_endon 0.64 54.0 4.68e-01 92.3% 82.5%
3278018 378.1.1.2 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH 0.62 42.0 5.00e-01 89.7% 100.0%
D3 medium residues 79-131
PDB
Domain cluster: representative
CATH (68)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2kvtA00 3.30.730.30 Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › YaiA protein 0.77 65.0 5.89e-01 92.5% 77.5%
6gc1A01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.73 64.0 4.35e-01 100.0% 66.0%
4grfA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.73 60.0 4.42e-01 92.5% 82.9%
4eo3A01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.72 59.0 4.42e-01 92.5% 86.2%
3gkmA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.72 59.0 4.27e-01 92.5% 83.4%
3cynB00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.72 63.0 4.43e-01 100.0% 81.5%
4hqsA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.72 58.0 4.30e-01 88.7% 88.1%
3lwaA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.72 61.0 4.39e-01 96.2% 80.5%
3drnB00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.72 61.0 4.48e-01 98.1% 84.7%
1xvwA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.71 58.0 4.17e-01 92.5% 81.6%
1mgtA01 3.30.160.70 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Methylated DNA-protein cysteine methyltransferase domain 0.71 57.0 4.90e-01 92.5% 55.7%
1btkA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.70 58.0 4.20e-01 94.3% 40.0%
3fkfD00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.70 57.0 4.22e-01 90.6% 84.7%
4gqcA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.69 59.0 4.24e-01 98.1% 85.0%
2k7iA01 3.30.160.160 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › YegP-like 0.69 56.0 5.77e-01 90.6% 100.0%
2bmxB01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.68 56.0 3.98e-01 94.3% 75.6%
1n8jA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.68 58.0 4.08e-01 100.0% 72.0%
1wp0A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.68 57.0 4.12e-01 96.2% 90.0%
2fy6A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.67 53.0 3.98e-01 88.7% 83.9%
1xccD01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.67 46.0 3.34e-01 71.7% 84.5%
3w6gA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.66 46.0 3.36e-01 71.7% 83.9%
3erwF00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.66 52.0 3.92e-01 86.8% 89.3%
4fybA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.66 55.0 3.99e-01 96.2% 73.9%
3or5A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.66 55.0 4.10e-01 96.2% 83.4%
1z5yE00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.66 58.0 4.34e-01 100.0% 89.0%
2f9sB00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.65 56.0 4.19e-01 98.1% 86.0%
1t4lB00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.65 52.0 4.51e-01 94.3% 67.8%
2dkhA03 3.40.30.20 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Phenol hydroxylase, C-terminal dimerisation domain 0.65 56.0 3.76e-01 98.1% 69.0%
3eurA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.65 49.0 3.75e-01 86.8% 82.1%
4fo5A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.65 50.0 3.80e-01 86.8% 86.8%
2dhjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 53.0 4.05e-01 94.3% 39.2%
2yf0A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 49.0 4.22e-01 88.7% 51.7%
2l57A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.64 54.0 4.17e-01 98.1% 77.0%
3kcmF00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.64 54.0 4.07e-01 98.1% 85.5%
4tyzA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 49.0 3.96e-01 94.3% 42.2%
3fm8D03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 52.0 4.18e-01 94.3% 48.1%
4v19S00 3.30.420.80 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribosomal protein S11/S14 0.63 55.0 4.04e-01 100.0% 46.9%
3c4bA02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.63 52.0 4.92e-01 100.0% 82.1%
5h8iI00 3.60.110.10 Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase 0.62 53.0 3.38e-01 100.0% 78.5%
4dm5A00 3.30.1450.10 Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › 0.62 48.0 4.13e-01 84.9% 57.5%
1evlA02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.61 48.0 3.98e-01 98.1% 49.1%
4hwtA02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.60 48.0 4.03e-01 100.0% 50.9%
3k2yA00 3.30.70.2330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 45.0 3.65e-01 81.1% 52.4%
3brcA02 3.40.50.10150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › B12-dependent dehydatase associated subunit 0.60 46.0 3.63e-01 86.8% 52.5%
2ls0101 2.40.50.670 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Target recognition domain of lytic exoenzyme 0.59 41.0 3.27e-01 73.6% 35.1%
2rgnB02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 48.0 3.70e-01 92.5% 39.8%
2dmyA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.58 46.0 3.85e-01 88.7% 50.5%
1q98A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.58 44.0 3.33e-01 92.5% 76.2%
2yzhA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.58 47.0 3.43e-01 96.2% 76.5%
6guuA01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 40.0 4.01e-01 75.5% 75.9%
3u1wA01 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 48.0 3.39e-01 98.1% 49.2%
4e19A00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.56 46.0 3.57e-01 92.5% 41.4%
4ms4A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.56 45.0 3.18e-01 94.3% 49.2%
3dcxA00 2.30.29.50 Mainly Beta › Roll › PH-domain like › Bacterial Pleckstrin homology domain 0.56 44.0 3.56e-01 92.5% 41.9%
2p0hA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 42.0 3.47e-01 92.5% 44.1%
5nckA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.56 45.0 3.68e-01 94.3% 51.4%
1jz7A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 43.0 3.50e-01 94.3% 89.6%
2ltrA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.54 41.0 3.55e-01 94.3% 54.3%
3pvlA04 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 43.0 3.58e-01 90.6% 49.5%
1jqgA02 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.54 46.0 2.88e-01 98.1% 21.0%
4ci8A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 45.0 2.84e-01 98.1% 25.6%
1j8bA00 3.30.1310.10 Alpha Beta › 2-Layer Sandwich › Ybab; Chain: A; › Nucleoid-associated protein YbaB-like domain 0.53 46.0 3.78e-01 94.3% 64.1%
2prvA00 3.40.1580.10 Alpha Beta › 3-Layer(aba) Sandwich › SMI1/KNR4-like › SMI1/KNR4-like 0.53 45.0 3.33e-01 100.0% 35.9%
3r2uB01 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.53 44.0 2.90e-01 98.1% 54.8%
1e8oA00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.52 42.0 3.85e-01 92.5% 67.6%
3a0oA03 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.52 41.0 2.76e-01 100.0% 57.7%
3iplB01 3.40.50.12780 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain 0.52 37.0 2.21e-01 88.7% 11.0%
3ebrA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 44.0 3.20e-01 100.0% 89.1%
ECOD (68)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5051984 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.84 72.0 5.38e-01 92.5% 41.7%
4952072 4325.1.1.0 mixed a+b and a/b › YegP-like › YegP-like › YegP-like 0.76 56.0 5.72e-01 79.2% 98.0%
3819381 2485.1.1.4 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › AhpC-TSA 0.75 58.0 4.20e-01 86.8% 80.0%
5012102 2485.1.1.4 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › AhpC-TSA 0.74 61.0 4.38e-01 90.6% 84.0%
7726 4325.1.1.1 mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 0.73 60.0 5.89e-01 94.3% 84.5%
3383781 252.1.1.0 a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD 0.73 54.0 5.51e-01 94.3% 84.0%
365686 2485.1.1.4 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › AhpC-TSA 0.73 60.0 4.31e-01 92.5% 81.2%
3637102 2485.1.1.30 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Phe_hydrox_dim 0.72 59.0 4.08e-01 92.5% 69.2%
4140296 220.1.1.8 beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.71 59.0 4.35e-01 94.3% 35.0%
4946641 2485.1.1.4 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › AhpC-TSA 0.71 56.0 4.07e-01 88.7% 83.2%
4346987 2484.1.1.72 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › YqgF 0.71 55.0 3.73e-01 84.9% 33.8%
3869434 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.71 59.0 4.42e-01 94.3% 37.7%
3903260 109.4.1.2707 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PH_21 0.70 57.0 3.35e-01 94.3% 10.9%
4188237 4325.1.1.1 mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 0.70 60.0 6.02e-01 98.1% 92.7%
5022340 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.70 53.0 4.87e-01 86.8% 62.9%
3515884 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.70 56.0 4.35e-01 94.3% 40.0%
3482603 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.70 55.0 4.54e-01 92.5% 47.0%
3393858 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.69 57.0 4.47e-01 94.3% 42.6%
4297945 4325.1.1.1 mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 0.69 56.0 5.61e-01 92.5% 89.1%
3233139 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.69 60.0 4.61e-01 100.0% 82.4%
3251833 2485.1.1.4 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › AhpC-TSA 0.69 60.0 4.27e-01 100.0% 80.0%
3284714 4325.1.1.1 mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 0.69 59.0 5.61e-01 100.0% 82.5%
4025888 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.68 54.0 4.59e-01 88.7% 100.0%
3164411 2485.1.1.4 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › AhpC-TSA 0.68 55.0 3.95e-01 88.7% 83.2%
5036411 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.68 54.0 4.14e-01 94.3% 36.9%
3912134 2485.1.1.69 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › DUF4174 0.66 57.0 4.34e-01 100.0% 99.2%
3496244 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.66 52.0 3.94e-01 94.3% 34.3%
3939892 2485.1.1.87 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › UBX7_N 0.66 55.0 4.30e-01 100.0% 88.8%
4989085 2485.1.1.37 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_2 0.66 52.0 4.14e-01 90.6% 86.1%
4317908 65.1.1.0 beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases 0.65 47.0 4.83e-01 84.9% 84.0%
3898182 2485.1.1.69 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › DUF4174 0.65 54.0 4.14e-01 100.0% 89.3%
3948780 2485.1.1.4 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › AhpC-TSA 0.65 52.0 3.80e-01 88.7% 83.2%
4973097 2485.1.1.44 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_7 0.65 53.0 4.31e-01 98.1% 84.3%
5034332 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.65 49.0 3.16e-01 81.1% 36.3%
4346501 2002.1.1.274 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1, Amidohydro_3 0.65 50.0 2.95e-01 84.9% 10.5%
3284045 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.65 51.0 4.43e-01 96.2% 54.7%
3566455 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.64 53.0 4.47e-01 98.1% 56.0%
3810543 220.1.1.20 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TFIIH 0.64 53.0 4.21e-01 94.3% 44.5%
3231506 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.64 54.0 4.02e-01 100.0% 46.9%
3567413 2485.1.1.69 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › DUF4174 0.64 54.0 4.06e-01 100.0% 92.4%
3487125 7502.1.1.0 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS 0.64 53.0 4.37e-01 98.1% 54.4%
3924612 220.1.1.8 beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.63 51.0 3.83e-01 94.3% 35.6%
3489849 5.1.4.74 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Vps16_N 0.63 48.0 2.77e-01 81.1% 23.2%
3965976 809.1.1.1 a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP › SmpA_OmlA 0.63 48.0 4.04e-01 83.0% 52.1%
3564088 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 49.0 4.02e-01 94.3% 45.5%
3875413 63.1.1.1 beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › CIMR 0.62 42.0 2.70e-01 71.7% 17.9%
4014812 4.8.1.2 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.61 43.0 4.17e-01 77.4% 66.7%
3828337 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.61 53.0 4.12e-01 100.0% 56.1%
3704921 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 46.0 3.44e-01 94.3% 30.3%
3277064 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.60 44.0 3.14e-01 79.2% 54.1%
3249381 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 49.0 3.50e-01 92.5% 29.7%
4959885 4100.1.1.0 a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.60 49.0 4.34e-01 98.1% 83.5%
3926611 5.1.4.220 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR35_2nd 0.59 48.0 3.04e-01 96.2% 35.6%
5055952 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.59 43.0 2.71e-01 81.1% 29.0%
3927128 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 47.0 3.76e-01 94.3% 43.3%
3697385 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.59 45.0 2.69e-01 84.9% 29.5%
4024732 295.1.1.40 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › Microp_apicomplexa_10 0.59 44.0 3.84e-01 77.4% 62.5%
3598206 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 48.0 3.84e-01 92.5% 46.4%
3403381 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.58 44.0 3.80e-01 92.5% 51.0%
3406971 5.1.4.13 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP 0.57 46.0 2.77e-01 100.0% 35.1%
2581402 5.1.5.12 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FG-GAP_3 0.57 39.0 2.56e-01 75.5% 41.3%
3779393 220.1.1.8 beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.57 43.0 3.47e-01 92.5% 39.2%
3517153 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.57 45.0 4.10e-01 98.1% 75.0%
3799509 225.1.1.7 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c_3 0.55 45.0 3.00e-01 90.6% 23.3%
3503204 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.54 40.0 3.60e-01 94.3% 63.2%
3398404 220.1.1.42 beta barrels › PH domain-like › PH domain-like › PH domain-like › INPP5B_PH 0.54 45.0 3.36e-01 94.3% 35.7%
4276893 246.1.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Carbon-nitrogen hydrolase › Carbon-nitrogen hydrolase › CN_hydrolase 0.53 45.0 2.88e-01 98.1% 29.8%
3627778 220.1.1.64 beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C1_MyoVII 0.52 40.0 3.46e-01 94.3% 52.0%
D4 medium residues 197-250
PDB