←Back to structures
IMGVR_UViG_3300013099_000017-3300013099-Ga0164315_10000001193
Arc-VirIMGVR_UViG_3300013099_000017-3300013099-Ga0164315_10000001193
Identity
- Kingdom:
- archaea
Quality
85.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 76-179
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4d6wA03 | 2.30.29.130 | Mainly Beta › Roll › PH-domain like › | 0.56 | 32.0 | 3.37e-01 | 72.1% | 61.1% |
| 2z17A00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.54 | 37.0 | 3.85e-01 | 70.2% | 86.2% |
| 2re3A02 | 2.30.270.10 | Mainly Beta › Roll › duf1285 protein fold › duf1285 protein | 0.54 | 32.0 | 3.69e-01 | 71.2% | 85.7% |
| 1wxrA03 | 3.30.160.280 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 36.0 | 4.10e-01 | 82.7% | 100.0% |
| 5fcrA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.51 | 35.0 | 3.36e-01 | 70.2% | 90.2% |
| 5jqkA03 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.51 | 39.0 | 2.83e-01 | 80.8% | 96.2% |
| 2kouA00 | 3.30.160.380 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Dicer dimerisation domain | 0.50 | 36.0 | 3.64e-01 | 85.6% | 75.5% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4960051 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.57 | 37.0 | 3.12e-01 | 76.0% | 38.5% |
| 3810292 | 3792.1.1.2 ↗ | beta sandwiches › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › APC1_3rd | 0.52 | 28.0 | 3.24e-01 | 73.1% | 70.7% |
| 3246192 | 1.1.17.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › DUF316 | 0.52 | 36.0 | 2.66e-01 | 70.2% | 92.1% |
| 3448327 | 4.1.1.150 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3123 | 0.52 | 33.0 | 3.85e-01 | 76.9% | 94.3% |
| 3940556 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 28.0 | 2.77e-01 | 79.8% | 46.4% |
| 3510355 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.51 | 41.0 | 3.96e-01 | 87.5% | 90.8% |
| 5031423 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.50 | 36.0 | 3.36e-01 | 75.0% | 82.2% |
| 3713462 | 216.1.1.3 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UEV | 0.50 | 38.0 | 3.16e-01 | 80.8% | 67.6% |
D2
medium
residues 1-50
Domain cluster:
rep: OR576727.1__WNM70222.1__X__00129__D59-108