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IMGVR_UViG_3300013099_000017-3300013099-Ga0164315_10000001218

Arc-Vir

IMGVR_UViG_3300013099_000017-3300013099-Ga0164315_10000001218

Quality

87.4 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-29_90-162
PDB
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2fblB00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.87 77.0 6.64e-01 92.2% 100.0%
5a67A00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.79 71.0 5.49e-01 96.1% 100.0%
2gfgA00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.75 65.0 5.22e-01 93.1% 97.9%
3n0qA01 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.64 45.0 3.29e-01 73.5% 63.5%
7szeB02 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.63 43.0 3.59e-01 70.6% 76.1%
2hzmG01 3.30.310.180 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.63 52.0 5.01e-01 90.2% 100.0%
3sb1A01 3.30.1370.140 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › HupH hydrogenase expression protein, C-terminal domain 0.61 43.0 4.40e-01 83.3% 75.8%
3ijtB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 51.0 4.57e-01 96.1% 93.7%
4fr9A00 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 44.0 3.98e-01 80.4% 90.1%
1lkeA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 41.0 3.62e-01 79.4% 86.6%
3ebkB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 40.0 3.44e-01 76.5% 87.8%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.55 38.0 3.27e-01 70.6% 75.3%
2wuqB00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.54 45.0 3.29e-01 92.2% 94.3%
2hzrA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 40.0 3.44e-01 78.4% 82.6%
2j7qA00 3.90.70.120 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.53 40.0 3.11e-01 80.4% 62.3%
3c4aA02 3.30.9.20 Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › 0.52 39.0 3.49e-01 79.4% 59.5%
3q6aB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 44.0 4.08e-01 93.1% 89.6%
1tu1A00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.52 45.0 4.01e-01 94.1% 77.1%
4paaA03 3.30.1360.120 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 0.52 43.0 3.59e-01 92.2% 55.0%
1xfsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 46.0 3.98e-01 96.1% 94.8%
6baoA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.52 37.0 3.35e-01 74.5% 84.6%
2kd2A01 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.51 39.0 4.25e-01 90.2% 97.6%
8es5A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 44.0 3.97e-01 94.1% 92.0%
1v2bB00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.51 43.0 3.75e-01 90.2% 100.0%
1mhmA00 3.60.90.10 Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase 0.51 44.0 3.40e-01 100.0% 85.8%
3cjmA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.50 42.0 3.16e-01 91.2% 91.8%
1u9tA01 3.40.1570.10 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains 0.50 34.0 2.99e-01 70.6% 89.2%
ECOD (52)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3964752 868.1.1.1 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH 0.89 86.0 7.17e-01 100.0% 100.0%
1273080 868.1.1.1 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH 0.87 78.0 6.69e-01 94.1% 98.7%
1674584 868.1.1.1 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH 0.79 71.0 5.50e-01 96.1% 100.0%
3602029 868.1.1.0 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related 0.78 73.0 5.74e-01 100.0% 100.0%
4033840 868.1.1.1 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH 0.78 67.0 5.40e-01 93.1% 98.4%
3987480 868.1.1.1 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH 0.77 66.0 5.36e-01 92.2% 99.5%
3588533 868.1.1.1 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH 0.76 66.0 5.28e-01 93.1% 98.9%
160441 868.1.1.1 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH 0.75 65.0 5.22e-01 93.1% 97.9%
5042040 868.1.1.1 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH 0.70 60.0 5.07e-01 94.1% 100.0%
3763936 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.67 51.0 4.35e-01 79.4% 84.4%
5019463 12.3.1.74 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › GDE_N 0.66 51.0 3.76e-01 82.4% 80.8%
3603228 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.66 45.0 4.65e-01 71.6% 75.8%
4996248 331.19.1.0 a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains 0.65 47.0 4.99e-01 76.5% 97.8%
3846916 331.9.1.8 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › AP3B1_C_2 0.64 46.0 4.42e-01 74.5% 80.0%
3278559 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.63 53.0 4.50e-01 93.1% 71.2%
4014955 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.62 47.0 4.33e-01 79.4% 83.1%
4943195 304.107.1.1 a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › GCV_T 0.62 52.0 3.80e-01 93.1% 53.9%
4209630 331.3.1.20 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › KshA_C 0.62 44.0 3.45e-01 72.5% 76.7%
3720887 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.61 47.0 4.26e-01 80.4% 84.4%
3283094 331.3.1.9 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.61 46.0 3.80e-01 81.4% 86.7%
3493300 331.9.1.9 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › PF26171 0.60 43.0 3.95e-01 74.5% 80.7%
4487146 244.1.1.33 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › PF30157 0.59 44.0 4.15e-01 79.4% 78.4%
4768813 331.10.1.1 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase › SAM_decarbox 0.58 43.0 3.46e-01 79.4% 79.7%
4495621 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.58 43.0 3.97e-01 79.4% 80.0%
4953412 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.57 50.0 4.68e-01 95.1% 79.2%
3691232 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.57 43.0 3.82e-01 80.4% 70.0%
5001332 2004.1.1.42 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.57 44.0 2.80e-01 82.4% 32.6%
5004871 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.57 47.0 4.94e-01 96.1% 100.0%
5045322 331.6.1.0 a+b two layers › TBP-like › MoaD-related protein, C-terminal domain › MoaD-related protein, C-terminal domain 0.56 48.0 4.47e-01 98.0% 75.2%
3736869 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.56 42.0 3.76e-01 80.4% 70.7%
3219546 220.1.1.4 beta barrels › PH domain-like › PH domain-like › PH domain-like › Ran_BP1 0.56 40.0 3.52e-01 74.5% 64.7%
3823427 331.4.1.2 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › NAF 0.56 47.0 4.41e-01 97.1% 75.2%
4956405 2004.1.1.42 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.55 40.0 2.68e-01 75.5% 31.9%
3260117 331.10.1.1 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase › SAM_decarbox 0.55 45.0 3.22e-01 92.2% 85.4%
5036897 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.55 47.0 4.15e-01 92.2% 100.0%
4928697 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.54 47.0 4.34e-01 95.1% 96.9%
None 0.54 48.0 3.21e-01 100.0% 81.4%
5005723 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.53 43.0 3.16e-01 88.2% 81.1%
142908 331.3.1.9 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.53 45.0 4.15e-01 94.1% 89.6%
3279524 331.3.1.9 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.52 45.0 3.97e-01 97.1% 89.7%
3714612 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.52 44.0 3.80e-01 93.1% 71.5%
3438388 331.4.1.2 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › NAF 0.52 44.0 4.02e-01 96.1% 70.4%
3353407 331.10.1.1 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase › SAM_decarbox 0.52 45.0 3.24e-01 100.0% 95.2%
3360656 331.4.1.2 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › NAF 0.51 45.0 4.25e-01 99.0% 79.7%
4954483 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.51 43.0 4.02e-01 90.2% 76.0%
4028560 223.2.1.9 a+b three layers › Profilin-like › profilin-like › profilin-like › Sedlin_N 0.51 44.0 3.94e-01 95.1% 93.0%
4122018 4099.1.1.10 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med1 0.51 39.0 3.93e-01 88.2% 83.0%
4030568 331.10.1.1 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase › SAM_decarbox 0.51 45.0 3.15e-01 99.0% 96.1%
3305495 331.10.1.1 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase › SAM_decarbox 0.51 45.0 3.14e-01 100.0% 96.2%
2130817 881.1.1.2 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1 0.50 41.0 3.42e-01 90.2% 72.6%
3619927 9.2.1.6 beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › DUF7042 0.50 41.0 3.96e-01 87.3% 79.1%
4132512 331.10.1.1 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase › SAM_decarbox 0.50 44.0 3.08e-01 100.0% 89.7%
D2 medium residues 30-89
PDB
Domain cluster: representative
CATH (63)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2w4yA00 2.40.160.220 Mainly Beta › Beta Barrel › Porin › 0.78 55.0 4.32e-01 75.0% 47.5%
7szeB02 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.76 53.0 3.71e-01 73.3% 25.5%
3aa0B02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.75 53.0 3.89e-01 75.0% 36.8%
1xkpB00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.73 58.0 4.53e-01 85.0% 67.8%
1wzaA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.72 51.0 4.60e-01 73.3% 98.7%
3t4nA01 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.71 52.0 4.38e-01 76.7% 50.0%
4e2oA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.71 51.0 4.44e-01 75.0% 92.0%
1vr8A00 3.40.1000.20 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › TM1622-like 0.71 50.0 3.82e-01 73.3% 66.7%
5zceA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.71 50.0 4.56e-01 73.3% 100.0%
1m53A03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.70 49.0 4.51e-01 73.3% 100.0%
5mu3B00 3.40.50.12050 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.70 44.0 3.20e-01 73.3% 23.3%
5cfvA01 3.30.700.10 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Glycoprotein, Type 4 Pilin 0.70 51.0 4.22e-01 78.3% 54.2%
3aj7A03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.70 49.0 4.51e-01 73.3% 98.7%
4aeeA05 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.70 49.0 4.71e-01 73.3% 94.0%
1uokA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.70 49.0 4.48e-01 73.3% 100.0%
5e1qA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.69 48.0 4.10e-01 73.3% 97.9%
3mswA00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.69 51.0 3.88e-01 78.3% 43.9%
3cm1A00 2.30.31.20 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB 0.69 47.0 3.62e-01 76.7% 31.6%
2wc7A02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.68 48.0 4.33e-01 71.7% 91.1%
2ze0A03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.68 49.0 4.50e-01 76.7% 100.0%
1wzlA04 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.68 49.0 4.36e-01 75.0% 98.8%
1cgtA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.68 48.0 4.15e-01 75.0% 91.5%
4aieA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.68 47.0 4.48e-01 73.3% 100.0%
4r8oA00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.67 47.0 4.02e-01 73.3% 58.2%
5brqA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.67 48.0 4.36e-01 75.0% 100.0%
5do8B03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.67 49.0 4.50e-01 76.7% 100.0%
1p32B00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.67 48.0 3.51e-01 78.3% 26.9%
3edfA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.67 48.0 4.33e-01 75.0% 100.0%
4l9cA00 3.40.1000.30 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › 0.67 52.0 3.85e-01 83.3% 37.3%
2iecD00 3.30.1300.20 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 7,8-dihydroneopterin aldolase (MptD) 0.67 47.0 3.81e-01 75.0% 56.4%
3i1aA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.67 49.0 4.10e-01 78.3% 77.7%
4lwoB02 2.70.160.11 Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 0.67 46.0 3.22e-01 71.7% 67.4%
1jyoA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.67 52.0 4.06e-01 85.0% 66.2%
4xb3A03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.67 47.0 4.44e-01 73.3% 100.0%
5w8mA00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.67 48.0 3.35e-01 76.7% 97.4%
1vavA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.65 58.0 3.90e-01 100.0% 48.2%
3d2lA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.65 46.0 4.62e-01 76.7% 85.7%
2giaB00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.64 56.0 4.30e-01 100.0% 89.7%
1n7vA02 2.60.330.10 Mainly Beta › Sandwich › receptor-binding protein prd1-p2, domain 2 › receptor-binding protein prd1-p2, domain 2 0.63 54.0 4.26e-01 95.0% 52.8%
4bf3A00 2.30.31.50 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Borrelia outer surface protein E/F 0.63 54.0 4.27e-01 100.0% 96.2%
3bxoA02 2.20.130.10 Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › CAC2371-like domains 0.62 45.0 4.62e-01 78.3% 89.8%
6r2nA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.62 50.0 3.80e-01 88.3% 97.1%
4rctA01 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.61 50.0 3.66e-01 96.7% 71.4%
1h91A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.61 47.0 3.38e-01 85.0% 71.7%
3jv1A00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.60 48.0 3.53e-01 93.3% 33.0%
2oyzA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.60 41.0 3.63e-01 73.3% 98.9%
2hzrA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 51.0 3.82e-01 100.0% 64.6%
2bzvA00 2.60.90.10 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain 0.60 45.0 3.38e-01 81.7% 99.3%
4hrzB00 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 43.0 3.46e-01 78.3% 51.2%
3rbyA02 2.40.128.310 Mainly Beta › Beta Barrel › Lipocalin › Protein HRI1, C-terminal domain 0.59 49.0 4.36e-01 100.0% 90.5%
4pmwA04 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 40.0 3.55e-01 70.0% 65.9%
5jozA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.58 50.0 3.24e-01 100.0% 58.4%
7a0hA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.57 45.0 3.37e-01 91.7% 46.0%
3ecrB03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.57 44.0 3.88e-01 91.7% 75.5%
2it9A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.56 47.0 3.72e-01 91.7% 100.0%
3pg7A02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 47.0 3.91e-01 100.0% 74.5%
2kd2A01 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.54 47.0 4.27e-01 100.0% 95.2%
1jkfA03 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.53 36.0 3.63e-01 71.7% 86.7%
4l1nA00 2.40.128.660 Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF15525, DUF4652 0.53 42.0 3.17e-01 91.7% 54.7%
3iq2A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.53 38.0 3.21e-01 83.3% 78.0%
2xqyA01 3.30.500.50 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.52 46.0 3.26e-01 98.3% 83.1%
1vqzA02 3.30.390.50 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain 0.51 41.0 3.59e-01 86.7% 95.5%
6ap4B02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.51 43.0 3.36e-01 100.0% 90.1%
ECOD (81)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3964752 868.1.1.1 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH 0.92 85.0 6.02e-01 100.0% 37.3%
3578584 5.1.8.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › putative conserved lipoprotein NT01CX_1156 0.77 55.0 4.47e-01 75.0% 44.5%
5042040 868.1.1.1 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH 0.77 69.0 4.95e-01 100.0% 41.2%
3752441 216.1.1.4 a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.76 54.0 4.28e-01 75.0% 40.8%
3829563 897.1.1.0 a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 0.76 55.0 3.95e-01 76.7% 29.7%
4955671 7089.1.1.0 a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD 0.75 59.0 5.39e-01 85.0% 76.2%
3697524 9.2.1.7 beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › PF30970 0.75 51.0 4.47e-01 75.0% 47.8%
4666231 9.1.1.14 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › CpeS 0.74 53.0 3.77e-01 76.7% 25.7%
3719596 77.1.1.3 beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › MORN_DRC7 0.73 63.0 4.55e-01 96.7% 67.6%
3443786 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.71 48.0 4.49e-01 73.3% 56.0%
3612141 719.1.1.5 beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › PF27933 0.71 59.0 4.56e-01 95.0% 56.5%
5035423 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.70 52.0 4.62e-01 80.0% 55.3%
4992459 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.70 48.0 4.57e-01 71.7% 64.3%
3745492 2484.1.1.176 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hexokinase_1+Hexokinase_2 0.70 55.0 3.05e-01 88.3% 14.3%
4013569 246.2.1.0 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases 0.69 48.0 3.38e-01 73.3% 99.0%
3400196 5.1.4.298 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd 0.69 57.0 3.43e-01 91.7% 14.0%
3928388 633.33.1.1 alpha bundles › Bromodomain-like › Rogdi › Rogdi › Rogdi_lz 0.69 50.0 3.39e-01 76.7% 29.8%
4092711 633.23.1.12 alpha bundles › Bromodomain-like › Claudin › Claudin › Fig1 0.69 60.0 4.06e-01 100.0% 75.7%
4394684 2484.1.1.176 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hexokinase_1+Hexokinase_2 0.69 55.0 3.29e-01 88.3% 29.8%
4057923 192.14.1.2 alpha bundles › Long alpha-hairpin › Siah interacting protein N terminal domain-like › Siah interacting protein N terminal domain-like › DUF3461 0.69 51.0 4.15e-01 80.0% 61.1%
3983642 220.1.1.73 beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF3461 0.69 51.0 4.46e-01 80.0% 76.7%
3827202 5.1.11.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › eIF2A 0.68 56.0 3.82e-01 91.7% 45.0%
3877730 2484.1.1.5 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hexokinase_1 0.68 54.0 3.68e-01 88.3% 57.0%
3286007 3844.2.1.1 a+b two layers › hydrogenase expression protein-like › MybT EspG5 chaperone › MybT EspG5 chaperone › ESX-1_EspG 0.68 60.0 3.94e-01 100.0% 49.4%
4981234 896.1.1.0 a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related 0.68 54.0 5.31e-01 90.0% 95.4%
3936392 101.1.12.3 alpha arrays › HTH › HTH › HTH motif inserted in other structures › SAS-6_N 0.68 58.0 4.27e-01 95.0% 58.1%
3179848 241.15.1.2 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › PI31_Prot_N 0.68 52.0 3.97e-01 83.3% 41.0%
4528700 7503.1.1.0 a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain 0.67 50.0 3.90e-01 80.0% 76.2%
4991151 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.67 60.0 4.24e-01 96.7% 84.2%
3963078 283.1.1.0 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase 0.66 46.0 4.15e-01 71.7% 60.0%
3959466 243.3.1.29 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF4333 0.66 45.0 4.21e-01 71.7% 68.0%
3739528 5.1.3.19 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Hira 0.66 54.0 3.74e-01 91.7% 42.4%
3494544 5.1.4.102 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_3 0.66 54.0 3.44e-01 93.3% 17.8%
3283829 3844.2.1.1 a+b two layers › hydrogenase expression protein-like › MybT EspG5 chaperone › MybT EspG5 chaperone › ESX-1_EspG 0.66 58.0 3.87e-01 100.0% 48.3%
5021185 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.66 59.0 4.19e-01 100.0% 56.6%
2388236 246.2.1.9 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos_2 0.65 46.0 3.26e-01 75.0% 95.4%
3575301 11.1.1.591 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › NUP210_Ig7 0.65 44.0 3.76e-01 70.0% 67.0%
3506427 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.65 57.0 4.55e-01 100.0% 73.6%
1390013 3844.2.1.1 a+b two layers › hydrogenase expression protein-like › MybT EspG5 chaperone › MybT EspG5 chaperone › ESX-1_EspG 0.65 46.0 2.93e-01 73.3% 19.0%
2870992 222.1.1.17 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PKS_DH_N 0.65 47.0 3.75e-01 76.7% 82.5%
3454249 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.64 50.0 4.19e-01 85.0% 69.5%
3277940 3844.2.1.1 a+b two layers › hydrogenase expression protein-like › MybT EspG5 chaperone › MybT EspG5 chaperone › ESX-1_EspG 0.64 56.0 3.74e-01 100.0% 48.3%
4142474 5.1.4.357 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WDCP 0.64 56.0 3.43e-01 100.0% 66.5%
3464481 5.1.3.142 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like 0.64 53.0 3.26e-01 93.3% 18.1%
4606103 2484.1.1.174 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.64 51.0 4.04e-01 86.7% 56.7%
3535499 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 50.0 4.18e-01 90.0% 65.5%
3290349 3844.2.1.1 a+b two layers › hydrogenase expression protein-like › MybT EspG5 chaperone › MybT EspG5 chaperone › ESX-1_EspG 0.63 55.0 3.66e-01 100.0% 48.2%
1150086 2484.1.1.5 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hexokinase_1 0.63 51.0 3.85e-01 88.3% 53.8%
3456597 897.1.1.1 a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 0.63 52.0 3.75e-01 90.0% 59.5%
3166635 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.63 49.0 3.91e-01 86.7% 96.8%
4076432 2484.1.1.174 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.62 48.0 3.87e-01 85.0% 58.4%
3460976 5.1.3.142 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like 0.62 53.0 3.31e-01 95.0% 20.9%
3254541 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.62 49.0 4.10e-01 88.3% 52.7%
3509197 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.61 48.0 4.35e-01 86.7% 62.4%
3421076 5.1.3.142 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like 0.61 51.0 3.33e-01 96.7% 33.4%
4377116 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.61 43.0 2.92e-01 76.7% 63.4%
4136273 7503.1.1.3 a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › TolB_N 0.61 46.0 3.41e-01 85.0% 61.2%
4045725 2484.1.1.174 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.60 47.0 3.80e-01 88.3% 81.6%
4253671 2484.1.1.174 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.60 46.0 3.46e-01 85.0% 73.5%
5026277 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.59 41.0 4.18e-01 73.3% 100.0%
3246415 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.59 52.0 4.13e-01 100.0% 76.8%
4438950 2484.1.1.174 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.59 45.0 3.28e-01 85.0% 67.0%
4382988 2484.1.1.174 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.58 46.0 3.69e-01 86.7% 83.3%
3873544 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.58 50.0 3.94e-01 100.0% 91.0%
None 0.58 46.0 3.70e-01 86.7% 46.1%
3221278 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.57 44.0 2.87e-01 88.3% 30.5%
4039156 2484.1.1.174 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.57 44.0 3.65e-01 85.0% 58.2%
3200646 220.1.1.201 beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF7493 0.57 51.0 4.23e-01 100.0% 89.5%
4308194 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.57 44.0 3.98e-01 86.7% 75.3%
4623130 7503.1.1.18 a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › PF30449 0.57 43.0 3.42e-01 85.0% 65.9%
5012328 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.57 46.0 3.31e-01 93.3% 89.2%
3405656 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.56 47.0 3.57e-01 100.0% 63.0%
4496364 7503.1.1.3 a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › TolB_N 0.56 45.0 3.51e-01 91.7% 71.4%
3330108 9.1.1.10 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › VDE 0.56 45.0 3.37e-01 98.3% 62.7%
4218926 2484.1.1.174 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.56 45.0 3.62e-01 88.3% 86.7%
3275715 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.55 43.0 3.68e-01 86.7% 53.0%
3470145 2.1.1.23 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › POT1 0.55 37.0 3.60e-01 71.7% 64.3%
4564098 2484.1.1.174 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.53 39.0 3.25e-01 81.7% 63.3%
1068681 5.1.8.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › putative conserved lipoprotein NT01CX_1156 › DUF4652 0.53 42.0 3.17e-01 91.7% 54.7%
3242056 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 41.0 3.22e-01 95.0% 74.2%
3233173 10.1.1.83 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Menorin_C 0.52 42.0 3.03e-01 100.0% 51.6%