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IMGVR_UViG_3300013099_000017-3300013099-Ga0164315_10000001246
Arc-VirIMGVR_UViG_3300013099_000017-3300013099-Ga0164315_10000001246
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 12-60_105-116
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3zh9B02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.65 | 46.0 | 4.48e-01 | 100.0% | 65.7% |
| 6m36O01 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.62 | 52.0 | 4.60e-01 | 98.4% | 99.0% |
| 2q0yA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.59 | 48.0 | 3.90e-01 | 100.0% | 91.3% |
| 1bxiA00 | 1.10.1200.20 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Colicin E immunity protein | 0.59 | 43.0 | 3.96e-01 | 78.7% | 96.4% |
| 4nlbA02 | 1.10.150.80 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain | 0.57 | 46.0 | 4.06e-01 | 90.2% | 63.8% |
| 2ztgA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.57 | 48.0 | 3.26e-01 | 100.0% | 67.6% |
| 2o5rA04 | 1.10.8.70 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 | 0.56 | 40.0 | 4.39e-01 | 90.2% | 97.9% |
| 3tt9A00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.56 | 38.0 | 2.64e-01 | 73.8% | 23.2% |
| 1kt1A03 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.56 | 38.0 | 2.85e-01 | 72.1% | 49.4% |
| 3rq9A00 | 1.10.287.2500 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 37.0 | 3.48e-01 | 72.1% | 76.9% |
| 2yqzA02 | 1.10.8.900 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.54 | 38.0 | 3.78e-01 | 78.7% | 92.6% |
| 1vq8V00 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 37.0 | 3.70e-01 | 72.1% | 96.9% |
| 3favD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.53 | 37.0 | 3.50e-01 | 77.0% | 59.0% |
| 3ik4B01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.52 | 40.0 | 3.31e-01 | 86.9% | 88.1% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3188092 | 101.7.1.0 ↗ | alpha arrays › HTH › DEK-C › DEK-C | 0.71 | 49.0 | 4.84e-01 | 72.1% | 76.9% |
| 3808410 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.64 | 49.0 | 4.86e-01 | 86.9% | 87.7% |
| 4927193 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.60 | 47.0 | 4.06e-01 | 91.8% | 67.6% |
| 2488197 | 2005.1.1.40 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g | 0.58 | 43.0 | 3.16e-01 | 78.7% | 62.4% |
| 3925454 | 650.1.1.1 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ | 0.58 | 43.0 | 3.88e-01 | 80.3% | 75.3% |
| 3799892 | 650.1.1.1 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ | 0.57 | 43.0 | 3.92e-01 | 82.0% | 76.5% |
| 4015058 | 650.1.1.0 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain | 0.55 | 42.0 | 3.91e-01 | 83.6% | 77.5% |
| 3422458 | 138.1.1.0 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain | 0.55 | 47.0 | 4.51e-01 | 96.7% | 92.9% |
| 3421913 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.55 | 42.0 | 3.73e-01 | 90.2% | 69.0% |
| 3485901 | 102.1.1.85 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › SAM_KIDINS220 | 0.53 | 45.0 | 3.75e-01 | 98.4% | 73.9% |
| 3943356 | 101.1.4.19 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_35 | 0.53 | 41.0 | 3.89e-01 | 88.5% | 74.7% |
| 3615 | 3004.1.1.1 ↗ | alpha bundles › Hypothetical protein YfhH, N-terminal domain › Hypothetical protein YfhH, N-terminal domain › Hypothetical protein YfhH, N-terminal domain › DUF1811 | 0.52 | 36.0 | 3.57e-01 | 100.0% | 67.7% |
| 3260626 | 10.12.1.52 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_8 | 0.52 | 45.0 | 2.86e-01 | 100.0% | 38.7% |
| 4034500 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.51 | 35.0 | 2.33e-01 | 73.8% | 14.8% |
| 3308663 | 601.3.1.11 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain › PHD_Oberon | 0.50 | 41.0 | 3.26e-01 | 100.0% | 41.4% |
D2
medium
residues 61-104_117-187
Domain cluster:
rep: MN047793.1__QDJ96317.1__Xoosp13_130__00130__D128-220
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3m05B01 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 34.0 | 3.80e-01 | 93.9% | 67.4% |
| 7qprA02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.54 | 33.0 | 3.14e-01 | 87.8% | 51.1% |
| 3cedA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.53 | 32.0 | 3.39e-01 | 93.0% | 68.4% |
| 8d8lE01 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.50 | 30.0 | 3.38e-01 | 88.7% | 77.9% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5076247 | 876.1.1.9 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DndB | 0.75 | 57.0 | 5.04e-01 | 80.0% | 95.2% |
| 4974679 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.71 | 55.0 | 5.75e-01 | 80.0% | 96.2% |
| 5069965 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.71 | 54.0 | 5.30e-01 | 80.9% | 89.6% |
| 5071270 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.70 | 49.0 | 5.68e-01 | 73.0% | 100.0% |
| 4393138 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.69 | 56.0 | 5.60e-01 | 87.0% | 96.7% |
| 3283211 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.68 | 50.0 | 4.70e-01 | 76.5% | 98.6% |
| 4964030 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.67 | 52.0 | 5.17e-01 | 82.6% | 87.5% |
| 4683061 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.67 | 48.0 | 5.28e-01 | 75.7% | 97.9% |
| 4370861 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.66 | 54.0 | 5.54e-01 | 87.0% | 99.1% |
| 5035573 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.66 | 48.0 | 4.85e-01 | 75.7% | 100.0% |
| 5073612 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.64 | 51.0 | 5.35e-01 | 84.3% | 95.2% |
| 5052297 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.61 | 43.0 | 4.94e-01 | 73.9% | 100.0% |
| 4300559 | 2493.1.1.2 ↗ | a/b three-layered sandwiches › MurF and HprK N-domain-like › MurF and HprK N-domain-like › MurF and HprK N-domain-like › Hpr_kinase_N | 0.51 | 44.0 | 4.04e-01 | 91.3% | 96.6% |