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IMGVR_UViG_3300013099_000017-3300013099-Ga0164315_1000000128

Arc-Vir

IMGVR_UViG_3300013099_000017-3300013099-Ga0164315_1000000128

Quality

95.9 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-96
PDB
D2 high residues 117-215
PDB
Domain cluster: representative
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1b77A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.92 88.0 6.46e-01 100.0% 46.5%
2ix2B00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.81 75.0 5.48e-01 100.0% 45.7%
1sxjH02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.81 75.0 6.83e-01 100.0% 91.4%
3p91A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.80 75.0 5.47e-01 100.0% 44.5%
1u7bA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.80 74.0 5.38e-01 100.0% 46.2%
1sxjH01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.80 73.0 6.72e-01 99.0% 92.7%
6j8yA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.79 73.0 5.31e-01 100.0% 45.5%
8dqwG01 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.79 73.0 5.96e-01 100.0% 74.9%
1t6lA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.79 73.0 5.35e-01 100.0% 45.4%
5wceA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.79 72.0 6.78e-01 100.0% 91.6%
4trtA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.78 72.0 6.74e-01 100.0% 92.5%
1vpkA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.78 71.0 6.71e-01 100.0% 91.6%
2ix2A01 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.78 71.0 5.35e-01 98.0% 48.4%
1ge8A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.78 72.0 5.33e-01 100.0% 47.1%
2z0lA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.77 71.0 4.97e-01 100.0% 44.6%
3a1jB00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.77 71.0 5.11e-01 100.0% 41.6%
5agvA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.77 71.0 6.44e-01 100.0% 90.1%
2avtA02 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.77 70.0 5.55e-01 100.0% 56.3%
1vpkA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.77 70.0 6.44e-01 100.0% 85.9%
1ud9A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.77 70.0 5.21e-01 100.0% 46.3%
5aguA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.77 70.0 6.45e-01 100.0% 91.3%
4trtA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.77 70.0 6.54e-01 100.0% 87.7%
4rkiA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.76 69.0 6.29e-01 100.0% 89.2%
5wceA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.76 70.0 6.38e-01 100.0% 89.9%
1dmlA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.76 71.0 5.05e-01 100.0% 43.1%
3t0pA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.76 69.0 5.51e-01 100.0% 55.4%
3pweA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.76 69.0 6.45e-01 100.0% 88.6%
5w7zA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.75 69.0 6.60e-01 100.0% 94.7%
2avtB01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.75 68.0 5.65e-01 100.0% 64.0%
6ptrB01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.75 67.0 6.46e-01 99.0% 94.7%
5agvA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.73 67.0 6.18e-01 100.0% 86.3%
2r41A00 3.10.450.150 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › enterococcus faecalis protein 0.59 46.0 4.63e-01 100.0% 82.5%
1p9rA01 3.30.450.90 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.55 45.0 4.38e-01 97.0% 78.4%
1u9tA02 3.40.1570.10 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains 0.51 38.0 3.20e-01 100.0% 46.2%
4grhA00 3.60.120.10 Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase 0.51 41.0 2.70e-01 87.9% 57.1%
ECOD (91)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2392884 227.1.1.14 a+b two layers › DNA clamp › DNA clamp › DNA clamp › gp45-slide_C 0.92 89.0 8.19e-01 100.0% 88.3%
3782606 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.82 77.0 6.66e-01 100.0% 85.5%
5010672 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.82 77.0 7.16e-01 100.0% 94.2%
4055466 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.82 77.0 7.08e-01 100.0% 91.9%
3503502 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.82 76.0 6.90e-01 100.0% 93.1%
3738030 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.82 76.0 6.78e-01 100.0% 88.9%
3932751 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.82 76.0 6.90e-01 100.0% 90.8%
3503503 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.82 76.0 6.61e-01 100.0% 93.1%
4456195 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.82 76.0 7.10e-01 100.0% 93.3%
3596476 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.81 76.0 6.62e-01 100.0% 93.7%
4941929 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.81 76.0 6.91e-01 100.0% 88.3%
3251045 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.81 76.0 6.43e-01 100.0% 75.3%
4372908 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.81 75.0 6.89e-01 100.0% 86.4%
5052551 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.81 75.0 6.89e-01 100.0% 89.6%
4212381 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.81 75.0 6.69e-01 100.0% 85.9%
4991675 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.81 75.0 6.90e-01 100.0% 91.2%
3397928 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.81 74.0 6.84e-01 100.0% 95.2%
138072 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.81 75.0 6.75e-01 100.0% 89.3%
143428 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.80 75.0 6.96e-01 100.0% 90.8%
3292092 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.80 74.0 6.65e-01 100.0% 90.3%
3804177 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.80 74.0 6.45e-01 100.0% 94.5%
4038410 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.80 74.0 6.52e-01 100.0% 92.9%
4998585 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.80 74.0 6.92e-01 100.0% 91.7%
4929645 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.80 74.0 6.81e-01 100.0% 91.2%
3997015 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.80 74.0 6.71e-01 100.0% 90.0%
4976500 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.80 74.0 6.75e-01 100.0% 88.3%
4943405 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.80 74.0 6.82e-01 100.0% 92.0%
5029787 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.80 74.0 6.91e-01 100.0% 91.7%
2442100 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.80 74.0 6.57e-01 100.0% 85.3%
4030418 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.80 74.0 6.52e-01 100.0% 90.7%
3230925 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.80 74.0 6.70e-01 100.0% 90.0%
3939755 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.80 74.0 6.39e-01 100.0% 83.8%
3722114 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.80 73.0 6.23e-01 100.0% 91.0%
3478161 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.80 74.0 6.58e-01 100.0% 92.6%
4542774 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.80 73.0 6.86e-01 100.0% 92.5%
2834343 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.79 73.0 5.89e-01 100.0% 72.0%
4934002 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.79 73.0 6.65e-01 100.0% 86.9%
1290662 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.79 73.0 6.42e-01 100.0% 82.5%
4057537 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.79 73.0 6.75e-01 100.0% 88.8%
5052550 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.79 73.0 6.73e-01 100.0% 92.8%
3719143 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.79 73.0 6.53e-01 100.0% 89.6%
4870150 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.79 73.0 6.56e-01 100.0% 86.6%
4956740 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.79 73.0 6.74e-01 100.0% 92.0%
3598259 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.79 73.0 6.52e-01 100.0% 91.9%
4937819 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.79 73.0 6.72e-01 100.0% 90.4%
5043507 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.79 73.0 6.82e-01 100.0% 95.8%
4987602 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.79 73.0 6.72e-01 100.0% 90.4%
3624708 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.79 73.0 6.53e-01 100.0% 86.7%
3702817 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.79 73.0 6.53e-01 100.0% 91.0%
4941928 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.79 73.0 6.79e-01 100.0% 92.5%
5078494 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.79 72.0 6.67e-01 100.0% 89.6%
4934001 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.79 72.0 6.66e-01 100.0% 92.8%
5056757 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.79 72.0 6.66e-01 100.0% 88.8%
143269 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.79 73.0 6.68e-01 100.0% 89.6%
4302174 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.79 72.0 6.64e-01 100.0% 88.8%
4178829 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.79 72.0 6.67e-01 100.0% 88.0%
5043506 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.78 72.0 6.64e-01 100.0% 88.8%
3602548 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.78 72.0 6.64e-01 100.0% 89.6%
3789624 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.78 72.0 6.35e-01 100.0% 89.3%
3785352 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.78 72.0 6.00e-01 100.0% 87.9%
3719938 227.1.1.17 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DUF7881_N 0.78 72.0 6.34e-01 100.0% 89.3%
2492036 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.78 72.0 6.52e-01 100.0% 86.0%
4943404 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.78 72.0 6.50e-01 100.0% 89.2%
4608521 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.78 71.0 5.61e-01 100.0% 74.5%
5044014 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.78 72.0 6.82e-01 100.0% 96.5%
4172290 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.78 71.0 6.49e-01 100.0% 89.2%
3351110 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.78 71.0 6.68e-01 100.0% 97.5%
4939065 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.78 72.0 6.70e-01 100.0% 90.0%
4059128 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.78 72.0 6.71e-01 100.0% 90.0%
2878147 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.78 71.0 6.35e-01 100.0% 83.2%
4437554 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.78 71.0 6.57e-01 100.0% 88.8%
4360456 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.78 71.0 6.47e-01 100.0% 86.2%
4460660 227.1.1.7 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 0.78 72.0 6.40e-01 100.0% 87.4%
3387590 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.78 71.0 6.75e-01 100.0% 89.6%
3743107 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.77 71.0 6.27e-01 100.0% 90.0%
162047 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.77 71.0 6.49e-01 100.0% 88.2%
3480669 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.77 70.0 6.21e-01 100.0% 90.2%
3625038 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.77 70.0 6.24e-01 100.0% 89.3%
143267 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.77 70.0 6.46e-01 100.0% 90.6%
3244230 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.77 70.0 6.07e-01 100.0% 88.7%
4936049 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.76 70.0 6.58e-01 100.0% 90.0%
3507498 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.76 69.0 6.03e-01 100.0% 88.0%
5059299 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.76 70.0 6.56e-01 100.0% 90.0%
3597091 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.76 70.0 6.47e-01 100.0% 91.1%
3193266 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.76 69.0 6.06e-01 100.0% 89.7%
1871497 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.76 68.0 6.45e-01 100.0% 89.1%
2392242 227.1.1.3 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.75 69.0 6.59e-01 100.0% 88.5%
5039026 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.75 68.0 6.41e-01 100.0% 87.5%
4047098 227.1.1.3 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.74 68.0 6.34e-01 100.0% 92.5%
3989004 2004.1.1.42 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.55 47.0 3.26e-01 96.0% 29.4%
3410153 5.1.3.2 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Ldl_recept_b 0.51 39.0 2.93e-01 83.8% 64.1%