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IMGVR_UViG_3300013099_000017-3300013099-Ga0164315_10000001286

Arc-Vir

IMGVR_UViG_3300013099_000017-3300013099-Ga0164315_10000001286

Quality

94.5 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-78
PDB
CATH (51)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3u1wA01 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.74 48.0 3.61e-01 75.6% 28.4%
2r0cA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.73 51.0 3.49e-01 71.8% 67.1%
2xlpB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.73 51.0 3.25e-01 71.8% 65.5%
4cy8A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.73 51.0 3.48e-01 71.8% 91.3%
3tdgA01 3.10.450.520 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.72 47.0 5.13e-01 73.1% 78.8%
2ia7A00 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.71 56.0 4.92e-01 85.9% 58.6%
2qcuB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.71 49.0 3.48e-01 71.8% 86.0%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 45.0 4.88e-01 73.1% 80.0%
6s8zA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 47.0 5.23e-01 76.9% 90.3%
3a5zB01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.68 48.0 5.32e-01 76.9% 92.1%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.68 47.0 5.06e-01 75.6% 84.8%
3s5wA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.66 51.0 3.19e-01 82.1% 40.2%
4tm3A00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.66 51.0 3.17e-01 82.1% 40.3%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.66 46.0 5.05e-01 76.9% 90.5%
3en8A01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 51.0 4.62e-01 87.2% 92.0%
1nw1A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.65 45.0 4.26e-01 73.1% 85.4%
5cqfA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.64 50.0 3.09e-01 82.1% 40.6%
4r80A00 3.10.450.630 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 49.0 4.99e-01 83.3% 85.5%
7obmA01 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.63 52.0 3.45e-01 89.7% 66.4%
3fkaB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 50.0 4.44e-01 91.0% 93.3%
1ebdA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.62 48.0 4.12e-01 82.1% 94.2%
2jq5A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 49.0 4.16e-01 87.2% 75.0%
2ovrB02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 47.0 3.06e-01 82.1% 33.6%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.61 50.0 4.93e-01 98.7% 85.5%
3fljA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 48.0 4.02e-01 88.5% 73.0%
3htyA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.60 49.0 4.63e-01 89.7% 97.9%
2ra6C00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.59 46.0 3.80e-01 84.6% 55.9%
3k7cA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 44.0 4.05e-01 82.1% 97.2%
2xepB01 3.10.450.280 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 44.0 3.91e-01 80.8% 75.4%
3l4rA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 50.0 4.00e-01 93.6% 58.3%
1j0wB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 40.0 3.69e-01 71.8% 62.1%
1gofA02 2.130.10.80 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Galactose oxidase/kelch, beta-propeller 0.58 43.0 2.75e-01 79.5% 34.0%
3f8xB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 46.0 3.97e-01 89.7% 78.0%
2e1bA02 3.30.980.10 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 0.57 42.0 3.66e-01 82.1% 100.0%
3ebwA01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 45.0 3.79e-01 89.7% 54.2%
2mqdA00 3.30.1460.60 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.56 47.0 4.13e-01 93.6% 83.2%
1ylxA00 3.30.70.1480 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GK1464-like 0.56 42.0 3.93e-01 82.1% 72.7%
1wchA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.55 39.0 2.73e-01 76.9% 41.2%
4ge6A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.55 39.0 2.68e-01 75.6% 44.6%
1a5yA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.55 39.0 2.75e-01 76.9% 46.5%
4orlA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 43.0 3.89e-01 87.2% 91.8%
2ivwA01 2.30.30.830 Mainly Beta › Roll › SH3 type barrels. › 0.54 40.0 4.02e-01 83.3% 77.5%
6iw6A02 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.54 40.0 3.68e-01 82.1% 88.0%
5is8A02 2.70.160.11 Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 0.54 43.0 3.26e-01 88.5% 94.5%
3nybA02 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.53 45.0 4.03e-01 93.6% 87.3%
1s2kA00 2.60.120.700 Mainly Beta › Sandwich › Jelly Rolls › Peptidase G1 0.53 40.0 3.12e-01 85.9% 80.4%
2r41A00 3.10.450.150 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › enterococcus faecalis protein 0.52 37.0 3.48e-01 83.3% 57.3%
2vt8A00 3.40.1000.30 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › 0.52 40.0 3.36e-01 83.3% 75.5%
3fetA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.52 43.0 3.43e-01 92.3% 80.0%
1wq8A00 2.10.90.10 Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines 0.51 42.0 3.92e-01 93.6% 81.8%
2el8A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.50 32.0 3.11e-01 71.8% 56.0%
ECOD (60)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4082860 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.75 51.0 3.38e-01 70.5% 77.9%
4675886 2003.1.3.8 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Mqo 0.74 51.0 3.07e-01 71.8% 88.3%
4297683 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.73 51.0 3.12e-01 71.8% 70.8%
5078994 2003.1.2.300 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GGR_cat 0.73 51.0 3.18e-01 71.8% 79.7%
4936051 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 45.0 5.20e-01 75.6% 87.3%
3415181 2003.1.2.6 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like,NAD_binding_8 0.73 51.0 3.33e-01 71.8% 64.9%
None 0.73 50.0 3.38e-01 71.8% 70.4%
4943707 2003.1.3.78 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO_C 0.72 50.0 3.49e-01 71.8% 83.3%
5017041 2003.1.2.22 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GMC_oxred_C 0.71 50.0 3.38e-01 71.8% 96.2%
4419948 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.71 49.0 5.36e-01 76.9% 86.2%
3393343 2003.1.2.5 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like 0.71 51.0 3.33e-01 75.6% 64.8%
4213539 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.71 49.0 5.33e-01 76.9% 86.2%
4278307 71.1.1.2 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA 0.70 50.0 3.70e-01 74.4% 70.5%
4146937 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.69 48.0 5.20e-01 76.9% 86.2%
3590827 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.69 47.0 5.09e-01 75.6% 84.6%
4938919 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 44.0 4.71e-01 70.5% 76.9%
3915194 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.68 57.0 3.65e-01 91.0% 61.9%
5035742 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 46.0 5.07e-01 76.9% 91.7%
4393385 1032.1.1.1 alpha arrays › Toxin A (TcdA) helical domain › Toxin A (TcdA) helical domain › Toxin A (TcdA) helical domain › TcdA_TcdB_pore 0.66 47.0 3.60e-01 75.6% 33.3%
3222248 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.66 51.0 3.79e-01 82.1% 62.1%
None 0.66 51.0 3.26e-01 82.1% 33.2%
4030194 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.65 50.0 3.20e-01 82.1% 31.6%
5005811 3414.1.1.0 beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein 0.65 49.0 4.95e-01 91.0% 78.8%
4497830 2003.1.2.28 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Lys_Orn_oxgnase 0.65 50.0 3.72e-01 82.1% 87.2%
3994068 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.65 55.0 3.70e-01 93.6% 49.7%
4988847 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.65 45.0 4.63e-01 79.5% 77.3%
3598363 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.64 51.0 3.31e-01 84.6% 34.1%
4031833 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.63 43.0 4.74e-01 76.9% 91.7%
5061853 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.63 50.0 4.33e-01 85.9% 91.7%
4991489 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.63 45.0 4.71e-01 78.2% 85.7%
4961330 2003.1.2.28 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Lys_Orn_oxgnase 0.62 49.0 3.96e-01 84.6% 90.0%
4013580 5.1.2.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.62 49.0 4.41e-01 85.9% 100.0%
5040072 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.62 48.0 3.57e-01 82.1% 60.0%
5035761 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.62 48.0 3.45e-01 82.1% 52.6%
2754825 5.1.4.14 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N 0.62 49.0 3.10e-01 85.9% 20.6%
5081985 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 50.0 3.36e-01 88.5% 44.3%
3969301 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.62 48.0 4.04e-01 83.3% 90.8%
4944107 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.61 49.0 3.90e-01 85.9% 95.5%
4058509 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.60 46.0 3.87e-01 82.1% 89.2%
3559155 1020.1.1.63 extended segments › Ezh2 N-terminal domain › Ezh2 N-terminal domain › Ezh2 N-terminal domain › CATSPERG_beta-prop 0.60 52.0 3.32e-01 100.0% 46.8%
4935792 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.60 47.0 3.76e-01 85.9% 91.3%
4935198 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.60 47.0 3.76e-01 85.9% 90.6%
4024735 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.60 42.0 4.39e-01 78.2% 81.4%
2644388 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.59 46.0 3.96e-01 87.2% 83.1%
4929919 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.59 45.0 4.30e-01 85.9% 92.6%
4931123 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.57 39.0 4.04e-01 75.6% 74.7%
2426852 316.1.1.36 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central 0.57 48.0 3.83e-01 97.4% 70.6%
4263663 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.56 47.0 3.85e-01 98.7% 82.5%
4355722 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.55 45.0 4.22e-01 89.7% 84.2%
3663972 246.3.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos 0.55 49.0 3.49e-01 100.0% 94.6%
3588565 6048.1.1.1 a+b two layers › DUF960-like › DUF960-like › DUF960-like › DUF960 0.55 41.0 4.03e-01 89.7% 72.7%
3855773 316.1.1.36 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central 0.54 46.0 3.65e-01 100.0% 60.6%
5039634 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.54 41.0 4.34e-01 84.6% 98.5%
4008035 223.1.1.112 a+b three layers › Profilin-like › sensor domains › sensor domains › PF30417 0.54 43.0 3.04e-01 91.0% 98.9%
4059727 7502.1.1.0 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS 0.53 41.0 3.29e-01 84.6% 89.7%
3288669 331.3.1.27 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF2505 0.53 42.0 3.49e-01 93.6% 84.4%
3787213 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.52 38.0 3.39e-01 78.2% 93.9%
3167073 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.52 43.0 3.56e-01 98.7% 92.5%
3259877 316.1.1.36 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central 0.50 43.0 3.29e-01 98.7% 48.3%
3938027 316.1.1.36 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central 0.50 41.0 3.57e-01 97.4% 78.5%