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IMGVR_UViG_3300013099_000017-3300013099-Ga0164315_10000001294
Arc-VirIMGVR_UViG_3300013099_000017-3300013099-Ga0164315_10000001294
Identity
- Kingdom:
- archaea
Quality
76.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-60
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4n4gA01 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.65 | 54.0 | 4.54e-01 | 100.0% | 64.9% |
| 1vljA02 | 1.20.1090.10 | Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain | 0.61 | 50.0 | 3.58e-01 | 100.0% | 36.5% |
| 4k51B00 | 1.25.40.860 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.61 | 42.0 | 3.10e-01 | 72.4% | 57.2% |
| 2v7fA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 45.0 | 3.41e-01 | 81.0% | 63.3% |
| 2fe3B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 40.0 | 3.60e-01 | 72.4% | 81.2% |
| 3i3tA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.57 | 46.0 | 3.06e-01 | 100.0% | 40.3% |
| 4u04A02 | 1.10.3290.10 | Mainly Alpha › Orthogonal Bundle › Fic-like fold › Fido-like domain | 0.56 | 49.0 | 3.26e-01 | 98.3% | 42.8% |
| 3djlA03 | 2.40.110.20 | Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › | 0.55 | 45.0 | 3.48e-01 | 98.3% | 98.7% |
| 2g8lA02 | 1.10.285.20 | Mainly Alpha › Orthogonal Bundle › Glutamate Dehydrogenase; Chain A, domain 3 › Uncharacterised protein PF01937, DUF89, domain 2 | 0.55 | 46.0 | 4.48e-01 | 94.8% | 86.2% |
| 4uhiA01 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.53 | 43.0 | 2.68e-01 | 100.0% | 33.2% |
| 2gslF00 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.52 | 41.0 | 3.33e-01 | 94.8% | 47.2% |
| 4nq1A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.51 | 41.0 | 2.72e-01 | 96.6% | 30.0% |
| 2k36A00 | 1.10.437.20 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › dsDNA poxvirus | 0.50 | 38.0 | 3.01e-01 | 89.7% | 81.9% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3346900 | 632.2.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains | 0.72 | 61.0 | 5.31e-01 | 100.0% | 98.9% |
| 3990091 | 601.18.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Oxygen-evolving enhancer protein 3 › Oxygen-evolving enhancer protein 3 | 0.71 | 61.0 | 5.58e-01 | 100.0% | 75.0% |
| 3182290 | 174.1.1.4 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › DUF4267 | 0.66 | 55.0 | 4.41e-01 | 100.0% | 76.2% |
| 3595668 | 2003.1.2.7 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2 | 0.58 | 49.0 | 3.32e-01 | 96.6% | 81.8% |
| 5017980 | 5056.1.1.1 ↗ | extended segments › Gated mechanosensitive channel › Gated mechanosensitive channel › Gated mechanosensitive channel › MscL | 0.56 | 41.0 | 3.88e-01 | 77.6% | 71.4% |
| 4355686 | 103.1.1.3 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › CRAL_TRIO_N | 0.51 | 44.0 | 3.90e-01 | 100.0% | 86.7% |