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IMGVR_UViG_3300013099_000017-3300013099-Ga0164315_1000000148

Arc-Vir

IMGVR_UViG_3300013099_000017-3300013099-Ga0164315_1000000148

Quality

84.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-70
PDB
Domain cluster: representative
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1fxkB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.81 67.0 5.63e-01 100.0% 55.0%
2zdiB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.69 65.0 5.47e-01 100.0% 68.9%
3aeiA00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.69 64.0 5.65e-01 100.0% 77.7%
4mtnA01 3.30.1480.10 Alpha Beta › 2-Layer Sandwich › N Utilization Substance Protein A; Chain:P; domain 4 › NusA, N-terminal domain 0.68 40.0 3.57e-01 86.8% 42.1%
2felA00 1.20.200.10 Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) 0.66 62.0 3.83e-01 100.0% 29.4%
3ffyA00 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.66 47.0 3.94e-01 75.0% 44.6%
1yf2A02 1.10.287.1120 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein 0.63 56.0 4.82e-01 100.0% 74.8%
2xzmG00 1.10.455.10 Mainly Alpha › Orthogonal Bundle › Ribosomal Protein S7 › Ribosomal protein S7/S5 0.62 44.0 3.26e-01 76.5% 71.9%
3pf7B00 1.10.620.20 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A 0.62 54.0 3.20e-01 95.6% 13.6%
1xexB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 47.0 3.50e-01 79.4% 42.2%
1d0xA04 1.20.120.720 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain 0.61 53.0 4.28e-01 100.0% 66.4%
4mt4A00 1.20.1600.10 Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) 0.60 52.0 3.14e-01 100.0% 14.4%
6l3tA01 1.20.1440.80 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Gap junction channel protein cysteine-rich domain 0.59 53.0 3.77e-01 100.0% 80.4%
1vq0A02 3.90.1280.10 Alpha Beta › Alpha-Beta Complex › CBS domain Like › HSP33 redox switch-like 0.58 36.0 3.83e-01 77.9% 73.7%
2retA00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.56 45.0 4.17e-01 85.3% 85.7%
6ui4A01 1.20.120.720 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain 0.56 46.0 4.28e-01 92.6% 98.9%
3aa0B02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.55 40.0 3.07e-01 76.5% 89.0%
4gniA04 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.55 40.0 3.69e-01 95.6% 60.5%
2p92A00 3.30.70.1490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp 0.55 48.0 4.32e-01 98.5% 72.6%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.54 46.0 3.67e-01 100.0% 53.2%
6f1uK02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.54 41.0 3.19e-01 80.9% 87.6%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 48.0 4.15e-01 98.5% 92.4%
6rzqA04 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.54 38.0 3.61e-01 95.6% 60.0%
1xjhA00 3.90.1280.10 Alpha Beta › Alpha-Beta Complex › CBS domain Like › HSP33 redox switch-like 0.54 34.0 3.58e-01 83.8% 71.0%
3mk7C01 6.10.280.130 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.54 47.0 4.25e-01 100.0% 77.7%
2i9yA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 45.0 3.55e-01 98.5% 63.7%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 47.0 4.06e-01 100.0% 94.2%
1z06A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 38.0 2.93e-01 79.4% 81.8%
6l2cB00 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.51 35.0 2.24e-01 72.1% 54.9%
4ctaA02 3.30.70.2860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 37.0 3.57e-01 94.1% 68.0%
7b1xA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 41.0 2.70e-01 88.2% 35.9%
5dymA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 42.0 3.74e-01 91.2% 100.0%
3gr5A02 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.51 41.0 4.11e-01 98.5% 85.3%
3p9aF00 1.10.132.80 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › 0.50 45.0 3.60e-01 100.0% 56.7%
5umbA02 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.50 35.0 3.41e-01 75.0% 65.3%
ECOD (82)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3921728 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.93 60.0 4.85e-01 100.0% 39.1%
3265214 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.90 75.0 6.10e-01 100.0% 51.3%
3236563 3567.1.1.0 a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer 0.89 61.0 4.84e-01 100.0% 38.4%
3202986 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.89 73.0 5.80e-01 100.0% 47.2%
3493963 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.87 70.0 6.06e-01 100.0% 58.0%
4112182 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.87 72.0 5.88e-01 100.0% 50.8%
3234976 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.87 71.0 5.92e-01 100.0% 53.6%
3787269 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.87 71.0 5.91e-01 100.0% 53.6%
3594965 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.86 70.0 5.40e-01 100.0% 42.1%
3394225 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.86 70.0 5.79e-01 100.0% 51.3%
3808578 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.86 70.0 6.80e-01 100.0% 79.7%
4995244 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.86 70.0 5.85e-01 100.0% 53.6%
3485296 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.86 70.0 5.94e-01 100.0% 56.2%
3593339 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.86 70.0 5.82e-01 100.0% 52.2%
4017372 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.85 70.0 5.80e-01 100.0% 52.2%
3298201 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.85 69.0 6.82e-01 98.5% 82.9%
3550136 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.85 70.0 5.77e-01 100.0% 52.2%
3712081 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.84 69.0 5.80e-01 100.0% 54.5%
4666900 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.84 69.0 5.55e-01 100.0% 48.0%
3614763 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.84 66.0 5.32e-01 100.0% 46.7%
4181293 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.83 68.0 5.75e-01 100.0% 54.5%
3786162 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.83 70.0 6.20e-01 100.0% 65.3%
3637098 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.83 68.0 5.37e-01 100.0% 45.1%
4940192 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.82 65.0 5.39e-01 100.0% 50.0%
3392569 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.82 67.0 5.31e-01 100.0% 46.4%
4178886 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.82 69.0 5.99e-01 100.0% 61.0%
4981980 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.82 68.0 5.62e-01 100.0% 52.2%
4977598 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.82 67.0 5.64e-01 100.0% 54.5%
3783976 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.81 68.0 6.14e-01 100.0% 67.8%
3790375 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.81 71.0 5.68e-01 100.0% 51.2%
4381440 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.81 66.0 5.44e-01 100.0% 51.3%
3228583 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.81 65.0 5.47e-01 100.0% 52.2%
3413217 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.80 66.0 5.40e-01 100.0% 51.3%
3628456 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.80 67.0 5.33e-01 100.0% 47.7%
3482328 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.80 65.0 5.52e-01 100.0% 56.2%
4025072 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.78 65.0 5.45e-01 100.0% 53.9%
4025452 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.78 63.0 5.26e-01 100.0% 51.3%
3771989 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.78 66.0 5.13e-01 100.0% 45.2%
3506058 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.75 69.0 6.02e-01 100.0% 68.0%
3933404 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.75 63.0 4.77e-01 100.0% 40.7%
3690513 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.72 68.0 5.26e-01 100.0% 65.4%
3828336 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.72 68.0 5.54e-01 100.0% 88.6%
5035493 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.71 68.0 5.69e-01 100.0% 96.2%
5066982 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.71 56.0 4.46e-01 86.8% 42.1%
4271212 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.71 67.0 5.34e-01 100.0% 70.7%
3586018 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.71 66.0 5.08e-01 100.0% 52.1%
3993677 823.1.1.0 a+b two layers › Head-to-tail joining protein W, gpW › Head-to-tail joining protein W, gpW › Head-to-tail joining protein W, gpW 0.70 59.0 5.85e-01 95.6% 90.0%
60305 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.70 66.0 5.55e-01 100.0% 68.9%
3750883 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.70 66.0 4.71e-01 100.0% 40.6%
4453177 4207.1.2.1 alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region › Med7 0.70 66.0 5.23e-01 100.0% 55.2%
5036014 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.70 66.0 5.76e-01 100.0% 74.7%
3935332 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.70 65.0 5.12e-01 100.0% 67.7%
3579472 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.69 65.0 5.11e-01 100.0% 56.2%
1000517 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.69 65.0 5.57e-01 100.0% 72.3%
3406351 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.69 64.0 5.35e-01 100.0% 79.1%
139279 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.69 64.0 5.65e-01 100.0% 77.7%
5025448 1075.1.1.3 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane_2 0.68 61.0 4.02e-01 100.0% 39.6%
4083451 192.2.1.20 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › ASNSD1-SEP 0.68 63.0 5.97e-01 100.0% 93.8%
3630462 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.67 58.0 4.65e-01 100.0% 50.7%
4955301 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.66 54.0 3.61e-01 92.6% 22.8%
3325708 109.4.1.1254 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.65 37.0 2.41e-01 85.3% 12.6%
3882804 263.1.1.4 a+b three layers › SRF-like › SRF-like › SRF-like › PRAS_NT 0.65 35.0 3.65e-01 88.2% 56.2%
5062471 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.65 58.0 4.95e-01 100.0% 99.1%
3675304 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.64 55.0 4.62e-01 100.0% 55.8%
3254236 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.64 55.0 4.85e-01 100.0% 65.7%
3940115 604.29.1.1 alpha bundles › Spectrin repeat-like › Trehalose-6-phosphate phosphatase N-terminal helical bundle › Trehalose-6-phosphate phosphatase N-terminal helical bundle › T6PP_N 0.63 57.0 4.75e-01 100.0% 60.0%
4056782 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.62 49.0 2.91e-01 94.1% 11.5%
4355183 323.1.1.0 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.62 44.0 3.41e-01 86.8% 32.9%
4973579 5050.1.1.9 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.62 54.0 3.88e-01 100.0% 96.0%
4457710 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.60 52.0 4.39e-01 100.0% 58.3%
1247620 101.1.1.72 alpha arrays › HTH › HTH › Three-helical HTH › GP3_package 0.59 39.0 3.15e-01 100.0% 33.8%
3942067 4120.1.1.44 few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP › TraD_N 0.57 50.0 4.31e-01 100.0% 77.3%
4961487 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 39.0 3.26e-01 73.5% 93.0%
4973169 7518.1.1.0 a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like 0.55 40.0 3.54e-01 77.9% 84.0%
3472968 5050.1.1.9 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.55 47.0 2.85e-01 97.1% 27.9%
4009799 274.1.1.4 a+b two layers › Pili subunits › Pili subunits › Pili subunits › T2SSI 0.53 42.0 3.63e-01 85.3% 66.7%
3914050 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.53 43.0 3.94e-01 100.0% 68.2%
4183868 878.1.1.1 a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 0.52 46.0 4.41e-01 98.5% 92.4%
3493241 323.1.1.0 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.52 37.0 2.92e-01 80.9% 42.3%
4950221 101.1.2.143 alpha arrays › HTH › HTH › winged helix domain › HTH_34 0.51 43.0 3.67e-01 92.6% 79.6%
3168940 109.4.1.64 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › GET4 0.51 43.0 2.80e-01 95.6% 26.8%
3367818 109.4.1.1272 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif 0.50 41.0 2.44e-01 91.2% 13.6%