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IMGVR_UViG_3300013103_000024-3300013103-Ga0164318_1000020552
Arc-VirIMGVR_UViG_3300013103_000024-3300013103-Ga0164318_1000020552
Identity
- Kingdom:
- archaea
Quality
78.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-48
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01507.26 best | PAPS_reduct | 23.8 | 5.50e-05 | 95.7% | 13.1% |
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7lhsB01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.87 | 78.0 | 5.04e-01 | 100.0% | 24.1% |
| 1surA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.85 | 75.0 | 4.74e-01 | 100.0% | 21.4% |
| 1zunA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.85 | 74.0 | 4.88e-01 | 100.0% | 37.0% |
| 4bwvA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.84 | 72.0 | 4.53e-01 | 100.0% | 19.8% |
| 2oq2D00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.82 | 72.0 | 4.50e-01 | 100.0% | 19.5% |
| 3vrhA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.71 | 60.0 | 3.70e-01 | 100.0% | 20.5% |
| 4hv0C00 | 1.10.1220.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like | 0.68 | 32.0 | 2.58e-01 | 95.7% | 22.5% |
| 2r01A02 | 2.20.180.10 | Mainly Beta › Single Sheet › putative fmn-dependent nitroreductase like fold › putative fmn-dependent nitroreductase like domains | 0.62 | 42.0 | 4.42e-01 | 89.4% | 78.6% |
| 4ifdK02 | 6.10.250.2660 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.55 | 31.0 | 3.53e-01 | 91.5% | 76.5% |
| 1vx7000 | 2.30.170.20 | Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L24 | 0.53 | 33.0 | 3.02e-01 | 74.5% | 48.4% |
| 1vq8U00 | 2.30.170.20 | Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L24 | 0.52 | 33.0 | 3.16e-01 | 74.5% | 56.6% |
| 7sglD01 | 3.40.50.12650 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 39.0 | 3.02e-01 | 93.6% | 78.8% |
| 6j7xA01 | 1.25.40.120 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Protein prenylyltransferase | 0.51 | 39.0 | 2.46e-01 | 100.0% | 15.3% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5038820 | 2005.1.1.14 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct | 0.88 | 79.0 | 5.04e-01 | 100.0% | 22.4% |
| 5033786 | 2005.1.1.14 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct | 0.86 | 77.0 | 4.71e-01 | 100.0% | 17.7% |
| 4099367 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.78 | 67.0 | 4.35e-01 | 100.0% | 27.9% |
| 4927969 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.75 | 63.0 | 3.98e-01 | 100.0% | 23.0% |
| 3789891 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.73 | 61.0 | 4.32e-01 | 100.0% | 38.1% |
| 5024161 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.71 | 58.0 | 3.74e-01 | 100.0% | 23.3% |
| 4403046 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.71 | 58.0 | 3.87e-01 | 100.0% | 28.1% |
| 3385512 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.70 | 58.0 | 3.73e-01 | 97.9% | 23.7% |
| 4263022 | 306.4.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › YggU-like › YggU-like › DUF167 | 0.58 | 37.0 | 3.02e-01 | 91.5% | 34.4% |
| 3885052 | 145.1.1.4 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › ASXH | 0.56 | 43.0 | 3.59e-01 | 91.5% | 94.7% |
| 4778908 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.53 | 31.0 | 2.60e-01 | 93.6% | 33.3% |
D2
high
residues 54-107
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kloA00 | 1.10.10.1420 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA replication factor Cdt1, C-terminal WH domain | 0.52 | 37.0 | 2.89e-01 | 81.5% | 55.1% |