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IMGVR_UViG_3300013382_000193-3300013382-Ga0116618_10016256
Arc-VirIMGVR_UViG_3300013382_000193-3300013382-Ga0116618_10016256
Identity
- Kingdom:
- archaea
Quality
81.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-151
Domain cluster:
rep: LacPavin_0818_WC40_scaffold_193576_prodigal-single.1__X__X__00294__D106-220
CATH (82)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4cn8A02 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.73 | 60.0 | 5.39e-01 | 85.5% | 85.3% |
| 1shuX00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.69 | 57.0 | 5.27e-01 | 86.2% | 87.8% |
| 4jgiB02 | 3.40.50.280 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain | 0.69 | 50.0 | 5.34e-01 | 86.2% | 85.7% |
| 2qxyA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.69 | 49.0 | 5.39e-01 | 84.8% | 89.9% |
| 4f1jA00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.68 | 56.0 | 4.99e-01 | 86.2% | 88.0% |
| 3lhxA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.65 | 60.0 | 4.69e-01 | 100.0% | 91.0% |
| 3u80A00 | 3.40.50.9100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dehydroquinase, class II | 0.64 | 48.0 | 5.11e-01 | 86.2% | 90.6% |
| 2f02B00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.63 | 57.0 | 4.43e-01 | 98.6% | 81.8% |
| 3uboB00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.63 | 57.0 | 4.39e-01 | 100.0% | 79.5% |
| 1ab5A00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.62 | 47.0 | 5.02e-01 | 86.2% | 91.2% |
| 1djqA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.62 | 56.0 | 4.09e-01 | 97.2% | 86.5% |
| 2afbB00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.62 | 56.0 | 4.36e-01 | 100.0% | 86.2% |
| 3umoA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.62 | 56.0 | 4.38e-01 | 98.6% | 83.2% |
| 2a1iA01 | 3.40.50.10130 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.61 | 45.0 | 4.87e-01 | 84.8% | 93.2% |
| 3fxaA00 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.61 | 49.0 | 4.51e-01 | 89.0% | 64.9% |
| 4zdjA02 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.60 | 49.0 | 4.11e-01 | 86.2% | 90.9% |
| 3ljsA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.60 | 53.0 | 4.10e-01 | 95.2% | 84.0% |
| 3nl6C02 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.60 | 54.0 | 4.28e-01 | 98.6% | 77.9% |
| 2v4uA00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.59 | 50.0 | 4.11e-01 | 91.7% | 92.9% |
| 2q09A02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.59 | 47.0 | 3.74e-01 | 84.8% | 98.7% |
| 4epkB00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.59 | 46.0 | 3.56e-01 | 83.4% | 98.5% |
| 2gb3A02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.58 | 49.0 | 4.19e-01 | 89.7% | 60.3% |
| 3otxB01 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.58 | 52.0 | 4.22e-01 | 98.6% | 92.8% |
| 3s28A03 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.58 | 47.0 | 3.71e-01 | 86.2% | 78.9% |
| 3qkwB01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.58 | 47.0 | 4.43e-01 | 85.5% | 87.9% |
| 3kl0A02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.58 | 42.0 | 3.39e-01 | 74.5% | 86.2% |
| 3looB01 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.58 | 52.0 | 4.22e-01 | 98.6% | 93.2% |
| 3votA01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 38.0 | 4.42e-01 | 83.4% | 94.1% |
| 6cblD01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.58 | 50.0 | 4.42e-01 | 95.2% | 72.8% |
| 3fovA00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.58 | 38.0 | 4.41e-01 | 82.8% | 94.1% |
| 2f62A00 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 47.0 | 4.61e-01 | 86.9% | 84.8% |
| 3dugA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.58 | 49.0 | 3.89e-01 | 91.7% | 88.3% |
| 3pm6A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.58 | 48.0 | 3.84e-01 | 89.0% | 89.2% |
| 1vp4A02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.58 | 49.0 | 4.27e-01 | 93.8% | 77.3% |
| 3e0lA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.57 | 47.0 | 3.72e-01 | 89.0% | 98.4% |
| 1tqxA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.57 | 48.0 | 4.21e-01 | 91.7% | 90.0% |
| 5uckB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.57 | 49.0 | 3.91e-01 | 93.1% | 78.3% |
| 2w7tA00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.57 | 49.0 | 4.03e-01 | 93.8% | 92.0% |
| 6cafA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.57 | 48.0 | 3.89e-01 | 93.1% | 92.7% |
| 3fdbA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.56 | 49.0 | 4.22e-01 | 91.7% | 66.4% |
| 7lldA01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.56 | 48.0 | 4.14e-01 | 94.5% | 68.1% |
| 1jilA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.56 | 40.0 | 3.50e-01 | 73.8% | 93.2% |
| 2qhaA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.55 | 48.0 | 3.66e-01 | 93.8% | 81.5% |
| 6jebA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.55 | 48.0 | 3.57e-01 | 93.1% | 90.0% |
| 1vizA00 | 3.20.20.390 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › FMN-linked oxidoreductases | 0.55 | 41.0 | 3.55e-01 | 76.6% | 89.3% |
| 4xs5B00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.55 | 41.0 | 4.53e-01 | 85.5% | 99.1% |
| 6w6aA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 48.0 | 4.06e-01 | 95.9% | 91.6% |
| 2pajA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.55 | 46.0 | 3.79e-01 | 91.7% | 87.3% |
| 2qezE03 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 43.0 | 3.49e-01 | 84.1% | 83.3% |
| 2g1uA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 40.0 | 4.19e-01 | 76.6% | 84.7% |
| 2ocdA02 | 3.40.50.40 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 41.0 | 4.37e-01 | 77.9% | 96.0% |
| 1hkuA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 41.0 | 3.71e-01 | 77.9% | 69.6% |
| 3bleA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 48.0 | 3.82e-01 | 97.9% | 87.9% |
| 1ur4A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.55 | 48.0 | 3.58e-01 | 97.2% | 90.9% |
| 3wdqA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.54 | 48.0 | 3.70e-01 | 96.6% | 80.6% |
| 1qwgA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.54 | 44.0 | 3.69e-01 | 86.2% | 69.3% |
| 4cqbA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.54 | 46.0 | 3.65e-01 | 91.7% | 86.7% |
| 1b1yA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.54 | 46.0 | 3.19e-01 | 92.4% | 97.8% |
| 1k77A00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.54 | 47.0 | 3.92e-01 | 96.6% | 93.4% |
| 3zm8A02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.54 | 47.0 | 3.69e-01 | 96.6% | 80.8% |
| 1q6oB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.54 | 45.0 | 4.01e-01 | 92.4% | 88.8% |
| 2aaaA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.54 | 47.0 | 3.52e-01 | 96.6% | 89.3% |
| 6d2xA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.53 | 47.0 | 3.65e-01 | 97.2% | 88.5% |
| 3g8rA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.53 | 44.0 | 3.70e-01 | 91.0% | 93.4% |
| 6yhhA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.53 | 46.0 | 3.52e-01 | 95.2% | 98.3% |
| 1reqB01 | 3.20.20.240 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Methylmalonyl-CoA mutase | 0.53 | 46.0 | 3.35e-01 | 97.2% | 84.7% |
| 2wqpA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.52 | 46.0 | 3.80e-01 | 97.2% | 83.0% |
| 1dxyA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 39.0 | 3.56e-01 | 77.9% | 100.0% |
| 2hk0A00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.52 | 44.0 | 3.60e-01 | 93.1% | 94.8% |
| 1uf3A00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.52 | 42.0 | 3.64e-01 | 86.2% | 83.7% |
| 4n6fA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.52 | 44.0 | 3.80e-01 | 93.8% | 85.5% |
| 6ktqA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.52 | 46.0 | 3.77e-01 | 99.3% | 92.9% |
| 5xgbA03 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.51 | 46.0 | 3.85e-01 | 97.9% | 92.0% |
| 4tv5A00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.51 | 43.0 | 3.72e-01 | 94.5% | 88.2% |
| 2x9qB00 | 3.40.50.11710 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cyclodipeptide synthase | 0.51 | 43.0 | 3.75e-01 | 91.7% | 93.7% |
| 2basB01 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.51 | 43.0 | 3.72e-01 | 91.7% | 92.9% |
| 1dxeA00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.51 | 43.0 | 3.65e-01 | 94.5% | 88.9% |
| 3cc8A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 39.0 | 3.51e-01 | 82.1% | 98.1% |
| 1pzxB01 | 3.40.50.10440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dihydroxyacetone kinase; domain 1 | 0.51 | 37.0 | 4.07e-01 | 76.6% | 95.1% |
| 3qz6A00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.50 | 43.0 | 3.61e-01 | 94.5% | 87.3% |
| 4hu4A00 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.50 | 44.0 | 3.75e-01 | 97.9% | 85.0% |
| 2ps2A02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.50 | 43.0 | 3.70e-01 | 95.2% | 81.9% |
ECOD (76)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4941226 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.82 | 56.0 | 5.94e-01 | 84.1% | 78.3% |
| 5025937 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.77 | 49.0 | 5.37e-01 | 79.3% | 77.5% |
| 4997775 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.76 | 54.0 | 6.10e-01 | 84.8% | 95.5% |
| 4935861 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.72 | 48.0 | 5.28e-01 | 86.2% | 82.5% |
| None | — | 0.72 | 59.0 | 3.76e-01 | 86.2% | 26.5% | |
| 3779733 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.71 | 59.0 | 3.69e-01 | 86.2% | 24.5% |
| 5080532 | 2008.4.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › TBP-interacting protein N-terminal domain-like › TBP-interacting protein N-terminal domain-like | 0.71 | 47.0 | 5.38e-01 | 85.5% | 89.8% |
| 4488209 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.71 | 47.0 | 5.19e-01 | 86.2% | 83.2% |
| 4946865 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.70 | 51.0 | 5.81e-01 | 78.6% | 99.1% |
| 3639039 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.70 | 62.0 | 5.27e-01 | 94.5% | 90.9% |
| 3838052 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.70 | 51.0 | 5.40e-01 | 86.2% | 86.4% |
| 5067597 | 2008.4.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › TBP-interacting protein N-terminal domain-like › TBP-interacting protein N-terminal domain-like | 0.70 | 47.0 | 5.35e-01 | 85.5% | 90.9% |
| 3577853 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.69 | 59.0 | 4.95e-01 | 89.7% | 74.9% |
| 2889549 | 2007.1.3.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding | 0.69 | 49.0 | 5.38e-01 | 86.9% | 87.6% |
| 4936416 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.69 | 57.0 | 4.72e-01 | 86.2% | 71.2% |
| 3220883 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.69 | 54.0 | 5.10e-01 | 82.8% | 87.4% |
| 5080733 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.69 | 58.0 | 6.14e-01 | 98.6% | 100.0% |
| 4992881 | 2007.9.1.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR_2 | 0.68 | 51.0 | 5.72e-01 | 83.4% | 98.3% |
| 4965137 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.68 | 55.0 | 5.69e-01 | 99.3% | 90.4% |
| 5079558 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.68 | 54.0 | 4.99e-01 | 84.1% | 90.8% |
| 4929961 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.68 | 45.0 | 4.88e-01 | 85.5% | 80.8% |
| 4928387 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.67 | 47.0 | 4.50e-01 | 71.0% | 76.1% |
| 5004671 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.67 | 54.0 | 4.25e-01 | 85.5% | 57.0% |
| 3898836 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.67 | 55.0 | 4.81e-01 | 86.2% | 78.6% |
| 4999083 | 2007.1.3.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding | 0.67 | 49.0 | 4.96e-01 | 84.8% | 76.4% |
| 4989224 | 2006.1.6.15 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF58 | 0.67 | 53.0 | 4.35e-01 | 84.1% | 60.8% |
| 5051475 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.66 | 53.0 | 4.63e-01 | 84.8% | 71.1% |
| 4944900 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.66 | 46.0 | 3.99e-01 | 70.3% | 70.2% |
| 4931386 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.66 | 45.0 | 5.11e-01 | 82.8% | 94.3% |
| 4927526 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.66 | 53.0 | 4.49e-01 | 84.8% | 67.5% |
| 4200991 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.66 | 47.0 | 5.14e-01 | 84.8% | 91.3% |
| 4128742 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.65 | 48.0 | 4.18e-01 | 75.2% | 66.2% |
| 3604315 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.65 | 51.0 | 4.57e-01 | 82.1% | 70.0% |
| 3442824 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.65 | 52.0 | 4.15e-01 | 85.5% | 64.5% |
| None | — | 0.64 | 47.0 | 4.00e-01 | 75.9% | 59.6% | |
| 5057271 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.64 | 53.0 | 5.18e-01 | 86.2% | 80.6% |
| 4992645 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.64 | 55.0 | 5.11e-01 | 90.3% | 86.3% |
| 4972017 | 2007.3.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains | 0.64 | 52.0 | 5.10e-01 | 86.9% | 91.9% |
| 4980311 | 2007.3.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains | 0.64 | 52.0 | 5.08e-01 | 86.9% | 90.0% |
| 145122 | 2007.1.12.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase › DHquinase_II | 0.64 | 48.0 | 5.11e-01 | 86.2% | 90.6% |
| 5075568 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.64 | 58.0 | 4.43e-01 | 100.0% | 77.9% |
| 5048493 | 2007.3.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains | 0.63 | 51.0 | 4.99e-01 | 86.2% | 91.3% |
| 4522770 | 2007.19.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Glycerate kinase I (Pfam 02595) domain I › Glycerate kinase I (Pfam 02595) domain I › Gly_kinase | 0.63 | 51.0 | 5.05e-01 | 86.2% | 88.4% |
| 4985423 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.63 | 45.0 | 4.78e-01 | 86.2% | 83.1% |
| 4982706 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.61 | 50.0 | 4.61e-01 | 86.9% | 90.3% |
| 4425727 | 2004.1.1.105 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinase-PPPase | 0.61 | 35.0 | 3.85e-01 | 73.1% | 69.6% |
| 3221972 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.60 | 45.0 | 4.10e-01 | 77.9% | 95.4% |
| 4942704 | 2008.1.1.16 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat | 0.59 | 42.0 | 4.75e-01 | 78.6% | 99.1% |
| 2161920 | 7577.1.1.2 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_3 | 0.58 | 50.0 | 4.10e-01 | 95.2% | 57.5% |
| 3334050 | 2002.1.1.50 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › F_bP_aldolase | 0.57 | 48.0 | 3.85e-01 | 89.0% | 90.7% |
| 3314088 | 2002.1.1.100 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › ComA | 0.57 | 48.0 | 3.91e-01 | 91.0% | 85.8% |
| 3696439 | 2002.1.1.100 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › ComA | 0.57 | 48.0 | 3.90e-01 | 91.0% | 82.5% |
| 3987846 | 2002.1.1.50 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › F_bP_aldolase | 0.57 | 49.0 | 3.89e-01 | 93.1% | 75.1% |
| 3950176 | 2002.5.1.1 ↗ | a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL | 0.56 | 43.0 | 3.55e-01 | 81.4% | 87.4% |
| 5023888 | 2002.1.1.100 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › ComA | 0.56 | 48.0 | 3.98e-01 | 91.7% | 86.8% |
| 2570415 | 2002.1.1.89 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_26 | 0.56 | 48.0 | 3.79e-01 | 94.5% | 83.5% |
| 4946548 | 2006.1.4.3 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › NYN | 0.55 | 39.0 | 3.91e-01 | 72.4% | 76.7% |
| 4201813 | 2002.1.1.116 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PdxJ | 0.55 | 48.0 | 4.05e-01 | 95.9% | 91.2% |
| 5000049 | 2004.1.1.196 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 | 0.55 | 39.0 | 3.56e-01 | 73.8% | 67.8% |
| 4557448 | 2002.1.1.10 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IGPS | 0.54 | 47.0 | 3.90e-01 | 94.5% | 94.2% |
| 4401259 | 2006.1.6.21 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_CoxE | 0.54 | 48.0 | 4.00e-01 | 94.5% | 61.3% |
| 9010 | 2002.5.1.1 ↗ | a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL | 0.54 | 45.0 | 3.79e-01 | 91.0% | 89.5% |
| 5078208 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.53 | 39.0 | 3.44e-01 | 74.5% | 91.4% |
| 3964166 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.53 | 42.0 | 3.98e-01 | 86.2% | 91.1% |
| 3178670 | 2002.1.1.111 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI | 0.53 | 43.0 | 3.52e-01 | 89.0% | 84.2% |
| 3782029 | 2003.1.4.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › SIR2 | 0.52 | 44.0 | 3.60e-01 | 91.0% | 82.9% |
| 4976916 | 2006.1.4.3 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › NYN | 0.52 | 39.0 | 4.26e-01 | 77.2% | 99.2% |
| 3691488 | 2002.1.1.111 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI | 0.52 | 45.0 | 3.66e-01 | 95.9% | 87.6% |
| 5014193 | 2006.1.4.3 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › NYN | 0.52 | 39.0 | 3.74e-01 | 77.2% | 71.5% |
| 3178279 | 2003.1.4.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › SIR2 | 0.52 | 43.0 | 3.39e-01 | 91.0% | 87.9% |
| 4932894 | 2003.1.7.10 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NagB/RpiA/CoA transferase-like › Rib_5-P_isom_A | 0.52 | 39.0 | 3.99e-01 | 80.0% | 100.0% |
| 4030884 | 2002.1.1.111 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI | 0.52 | 43.0 | 3.67e-01 | 92.4% | 87.2% |
| 3654895 | 2002.1.1.111 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI | 0.51 | 44.0 | 3.56e-01 | 94.5% | 82.8% |
| 4992604 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.51 | 46.0 | 4.48e-01 | 97.2% | 89.4% |
| 5000511 | 2006.1.4.3 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › NYN | 0.51 | 40.0 | 3.89e-01 | 99.3% | 74.4% |
| 142707 | 2002.1.1.111 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI | 0.50 | 43.0 | 3.61e-01 | 94.5% | 87.3% |
D2
medium
residues 155-246
Domain cluster:
rep: SRR1747018_scaffold_15_prodigal-single.1__X__X__00405__D414-500
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF14311.13 best | DUF4379 | 29.6 | 9.10e-07 | 59.8% | 83.9% |
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1igqB00 | 2.30.30.150 | Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain | 0.62 | 31.0 | 3.88e-01 | 73.9% | 78.9% |
| 1z1bA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.56 | 30.0 | 3.57e-01 | 73.9% | 80.7% |
| 2diqA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 33.0 | 3.26e-01 | 81.5% | 57.0% |
| 2d9tA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 29.0 | 3.89e-01 | 78.3% | 100.0% |
| 3goxA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 29.0 | 3.71e-01 | 79.3% | 96.1% |
| 4b9wA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 30.0 | 3.67e-01 | 78.3% | 92.9% |
| 2do3A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 29.0 | 3.71e-01 | 80.4% | 100.0% |
| 4wi1A02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.51 | 37.0 | 3.39e-01 | 76.1% | 65.0% |
| 1adjB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.51 | 36.0 | 3.66e-01 | 75.0% | 79.8% |
| 1g5hB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.51 | 38.0 | 3.61e-01 | 78.3% | 77.6% |
| 3netB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.50 | 37.0 | 3.65e-01 | 77.2% | 79.6% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3598807 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.80 | 57.0 | 6.47e-01 | 73.9% | 97.1% |
| 3605531 | 375.1.1.77 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF4379 | 0.73 | 57.0 | 5.94e-01 | 81.5% | 89.3% |
| 4982334 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 32.0 | 3.93e-01 | 81.5% | 89.1% |
| 5033075 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 32.0 | 4.03e-01 | 82.6% | 92.7% |
| 5058671 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 31.0 | 3.89e-01 | 82.6% | 90.9% |
| 4952887 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 30.0 | 3.82e-01 | 81.5% | 90.9% |
| 4000280 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 32.0 | 3.96e-01 | 81.5% | 96.4% |
| 4950396 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 30.0 | 3.64e-01 | 81.5% | 87.3% |
| 5025079 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 32.0 | 3.83e-01 | 81.5% | 94.5% |
| 3586487 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 32.0 | 3.38e-01 | 83.7% | 64.7% |
| 5040416 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 30.0 | 3.76e-01 | 80.4% | 98.0% |
| 3535278 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 33.0 | 3.93e-01 | 79.3% | 95.0% |
| 4975150 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 32.0 | 3.83e-01 | 83.7% | 91.7% |
| 4990212 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 30.0 | 3.70e-01 | 80.4% | 90.9% |
| 5079023 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 27.0 | 3.55e-01 | 76.1% | 97.8% |
| 3398093 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.52 | 32.0 | 3.84e-01 | 84.8% | 95.0% |
| 3889378 | 386.1.1.9 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-U1 | 0.52 | 28.0 | 3.37e-01 | 95.7% | 90.0% |
| 4946165 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 31.0 | 3.82e-01 | 83.7% | 96.4% |
| 4297095 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.52 | 38.0 | 3.65e-01 | 76.1% | 75.2% |
| 4992872 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 30.0 | 3.78e-01 | 82.6% | 96.4% |
| 3842631 | 4.1.1.243 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_Myosin-XVIIIa | 0.52 | 32.0 | 3.62e-01 | 77.2% | 81.4% |
| 3336463 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.52 | 40.0 | 4.24e-01 | 85.9% | 100.0% |
| 5060760 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.52 | 30.0 | 3.50e-01 | 81.5% | 81.5% |
| 5033313 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.51 | 37.0 | 3.62e-01 | 75.0% | 76.8% |
| 4640921 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.50 | 36.0 | 3.68e-01 | 76.1% | 79.6% |
| 3688923 | 2.1.1.89 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dis3l2_C_term | 0.50 | 27.0 | 2.90e-01 | 85.9% | 58.7% |