←Back to structures
IMGVR_UViG_3300013382_000193-3300013382-Ga0116618_10016261
Arc-VirIMGVR_UViG_3300013382_000193-3300013382-Ga0116618_10016261
Identity
- Kingdom:
- archaea
Quality
73.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-109
Domain cluster:
rep: OQ884030.1__WNO29738.1__X__00006__D3-80
CATH (44)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wnhA02 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.74 | 57.0 | 5.25e-01 | 81.2% | 69.2% |
| 3e99A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.72 | 56.0 | 4.78e-01 | 81.2% | 89.2% |
| 5ig0A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.69 | 53.0 | 4.74e-01 | 80.2% | 93.9% |
| 5cxoB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.69 | 54.0 | 4.82e-01 | 83.3% | 89.6% |
| 2lyxA00 | 3.10.450.390 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Protein of unknown function DUF3889 | 0.69 | 50.0 | 5.23e-01 | 80.2% | 83.9% |
| 4x2oA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.69 | 53.0 | 4.31e-01 | 82.3% | 88.3% |
| 3b7cA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.68 | 50.0 | 4.66e-01 | 78.1% | 96.7% |
| 6x05A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.67 | 61.0 | 4.05e-01 | 100.0% | 36.3% |
| 1t17A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.66 | 47.0 | 4.03e-01 | 80.2% | 47.3% |
| 2owpA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.66 | 52.0 | 4.71e-01 | 83.3% | 90.7% |
| 3rgaA01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.66 | 51.0 | 4.56e-01 | 81.2% | 88.7% |
| 4o3vA00 | 3.10.450.230 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein | 0.66 | 52.0 | 4.62e-01 | 84.4% | 92.0% |
| 8aa0E01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.66 | 59.0 | 4.15e-01 | 100.0% | 47.4% |
| 1of5A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.66 | 59.0 | 4.99e-01 | 97.9% | 90.9% |
| 3grdA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.65 | 49.0 | 4.46e-01 | 81.2% | 90.2% |
| 4ec6A00 | 3.10.450.540 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.65 | 53.0 | 5.06e-01 | 87.5% | 96.3% |
| 3mg1B02 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 53.0 | 4.86e-01 | 89.6% | 94.4% |
| 7f13A01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 48.0 | 4.24e-01 | 80.2% | 80.6% |
| 3fsdA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 50.0 | 4.64e-01 | 84.4% | 97.5% |
| 1nt4A01 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.63 | 50.0 | 3.72e-01 | 84.4% | 99.2% |
| 3hk4A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 45.0 | 4.25e-01 | 76.0% | 91.5% |
| 3kspA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 48.0 | 4.40e-01 | 83.3% | 91.5% |
| 3dm8A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 48.0 | 4.27e-01 | 81.2% | 92.6% |
| 3obaA05 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.61 | 46.0 | 3.30e-01 | 81.2% | 41.6% |
| 1cruA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.61 | 54.0 | 3.51e-01 | 100.0% | 25.2% |
| 1qftB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.61 | 44.0 | 3.68e-01 | 77.1% | 49.7% |
| 3fgyA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 45.0 | 4.06e-01 | 80.2% | 85.2% |
| 2qrdA00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.60 | 45.0 | 4.33e-01 | 84.4% | 68.4% |
| 1v2bB00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.60 | 50.0 | 4.32e-01 | 97.9% | 58.3% |
| 2pcsA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.60 | 39.0 | 3.38e-01 | 80.2% | 41.4% |
| 1ut7B01 | 2.170.150.80 | Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › NAC domain | 0.59 | 42.0 | 3.85e-01 | 77.1% | 56.8% |
| 4pj2A00 | 2.40.128.460 | Mainly Beta › Beta Barrel › Lipocalin › Periplasmic lysozyme inhibitor of I-type lysozyme | 0.58 | 50.0 | 4.67e-01 | 96.9% | 90.1% |
| 4g79A00 | 2.170.210.20 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain | 0.57 | 49.0 | 4.43e-01 | 94.8% | 87.3% |
| 2obdA01 | 3.15.20.10 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 2 › Bactericidal permeability-increasing protein; domain 2 | 0.56 | 43.0 | 3.13e-01 | 82.3% | 41.0% |
| 4akrA02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.56 | 41.0 | 3.67e-01 | 81.2% | 51.7% |
| 2pwwA00 | 3.30.310.100 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › YugN-like | 0.55 | 39.0 | 3.72e-01 | 85.4% | 62.6% |
| 3rd6A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 41.0 | 3.61e-01 | 80.2% | 67.4% |
| 3aa0B02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.54 | 41.0 | 3.55e-01 | 81.2% | 50.3% |
| 3anzC00 | 2.70.240.10 | Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA | 0.54 | 44.0 | 3.16e-01 | 90.6% | 96.9% |
| 6obtA00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.52 | 42.0 | 3.09e-01 | 87.5% | 67.2% |
| 2uvaG09 | 2.40.128.700 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 41.0 | 3.88e-01 | 85.4% | 87.1% |
| 2je8A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 35.0 | 3.46e-01 | 85.4% | 63.6% |
| 1m6kA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.51 | 41.0 | 3.12e-01 | 90.6% | 82.4% |
| 4k02A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.50 | 41.0 | 3.84e-01 | 92.7% | 89.0% |
ECOD (54)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3708657 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.72 | 56.0 | 4.99e-01 | 83.3% | 97.0% |
| 3185390 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.70 | 55.0 | 5.17e-01 | 82.3% | 77.4% |
| 4020443 | 243.1.1.2 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 | 0.70 | 55.0 | 5.10e-01 | 84.4% | 94.3% |
| 3289158 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.70 | 53.0 | 5.07e-01 | 80.2% | 94.5% |
| 152844 | 243.3.1.8 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3889 | 0.69 | 50.0 | 5.23e-01 | 80.2% | 83.9% |
| 3246578 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.69 | 63.0 | 4.11e-01 | 100.0% | 26.5% |
| 4254174 | 4099.1.1.22 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › CENP-P | 0.68 | 45.0 | 3.91e-01 | 71.9% | 44.8% |
| 3307679 | 243.1.1.2 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 | 0.68 | 53.0 | 4.71e-01 | 84.4% | 85.0% |
| 3858387 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.67 | 55.0 | 3.26e-01 | 88.5% | 14.4% |
| 3453643 | 243.1.1.2 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 | 0.66 | 52.0 | 4.54e-01 | 84.4% | 80.7% |
| 3967804 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.66 | 50.0 | 4.92e-01 | 81.2% | 94.3% |
| 3593286 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.65 | 56.0 | 3.77e-01 | 92.7% | 49.3% |
| 3832530 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.65 | 60.0 | 4.00e-01 | 100.0% | 30.1% |
| 3628642 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.65 | 59.0 | 3.94e-01 | 100.0% | 35.1% |
| 4940463 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.65 | 59.0 | 5.24e-01 | 100.0% | 85.2% |
| 4074364 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.65 | 52.0 | 4.72e-01 | 86.5% | 83.8% |
| 4039776 | 243.3.1.48 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › GlfB_C | 0.65 | 49.0 | 4.19e-01 | 81.2% | 53.8% |
| 3961157 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.65 | 49.0 | 4.57e-01 | 80.2% | 80.0% |
| 3271615 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.65 | 58.0 | 3.75e-01 | 100.0% | 34.8% |
| 3694950 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.64 | 49.0 | 4.29e-01 | 81.2% | 84.8% |
| 3464478 | 5.3.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II | 0.64 | 51.0 | 4.33e-01 | 85.4% | 71.0% |
| 5053967 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.63 | 48.0 | 5.11e-01 | 80.2% | 97.6% |
| 5022489 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.63 | 56.0 | 3.63e-01 | 100.0% | 34.9% |
| 3697493 | 5.1.5.70 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › TFIIIC_delta | 0.63 | 56.0 | 3.72e-01 | 99.0% | 50.4% |
| 5047424 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.63 | 44.0 | 4.15e-01 | 80.2% | 59.2% |
| 5047426 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.62 | 44.0 | 4.16e-01 | 80.2% | 61.7% |
| 4997740 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.62 | 45.0 | 4.04e-01 | 80.2% | 53.6% |
| 3889613 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.61 | 55.0 | 3.59e-01 | 99.0% | 37.6% |
| 3701390 | 11.8.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like | 0.61 | 54.0 | 4.05e-01 | 99.0% | 66.9% |
| 4472109 | 243.1.1.103 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF30257 | 0.61 | 46.0 | 4.33e-01 | 81.2% | 88.3% |
| 3214004 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.61 | 50.0 | 4.98e-01 | 88.5% | 97.0% |
| 3613168 | 5.1.3.28 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 | 0.61 | 55.0 | 3.63e-01 | 100.0% | 45.1% |
| 3249097 | 5.1.4.16 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A | 0.61 | 55.0 | 3.69e-01 | 100.0% | 49.3% |
| 3666444 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.60 | 45.0 | 3.69e-01 | 81.2% | 42.2% |
| 1388524 | 243.17.1.1 ↗ | a+b two layers › Cystatin-like › C-terminal domain of PatG › C-terminal domain of PatG › PatG_C | 0.59 | 45.0 | 4.10e-01 | 81.2% | 65.4% |
| 3474976 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.59 | 43.0 | 3.94e-01 | 80.2% | 56.9% |
| 3738125 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.59 | 44.0 | 3.64e-01 | 80.2% | 45.0% |
| 3440523 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.59 | 45.0 | 3.43e-01 | 81.2% | 34.7% |
| 4928436 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.58 | 48.0 | 4.22e-01 | 96.9% | 60.7% |
| 3507449 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.58 | 44.0 | 3.49e-01 | 82.3% | 56.1% |
| 4999715 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.57 | 40.0 | 3.71e-01 | 81.2% | 56.0% |
| 2769983 | 3692.1.1.1 ↗ | a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall | 0.57 | 41.0 | 3.64e-01 | 75.0% | 59.3% |
| 3611540 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.57 | 50.0 | 3.30e-01 | 100.0% | 25.1% |
| 4933284 | 3692.1.1.1 ↗ | a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall | 0.56 | 39.0 | 3.45e-01 | 71.9% | 55.6% |
| 5003963 | 5.1.11.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › eIF2A | 0.56 | 50.0 | 3.28e-01 | 100.0% | 30.4% |
| 3781112 | 3561.1.1.1 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Med17 | 0.56 | 49.0 | 3.14e-01 | 99.0% | 23.5% |
| 4966638 | 881.1.1.44 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF6517 | 0.55 | 47.0 | 3.81e-01 | 96.9% | 50.3% |
| 3834272 | 5.1.5.96 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FBA_3 | 0.55 | 47.0 | 3.44e-01 | 100.0% | 41.4% |
| 3277920 | 222.1.1.17 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PKS_DH_N | 0.54 | 42.0 | 3.80e-01 | 82.3% | 99.2% |
| 3248437 | 267.1.1.3 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase | 0.54 | 46.0 | 3.62e-01 | 95.8% | 70.0% |
| 3286883 | 2003.1.5.67 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_12 | 0.54 | 40.0 | 3.01e-01 | 80.2% | 33.9% |
| 5083094 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.53 | 38.0 | 2.89e-01 | 76.0% | 36.8% |
| 3644309 | 71.1.1.12 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › DUF620 | 0.52 | 40.0 | 2.83e-01 | 82.3% | 81.4% |
| 5046132 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.51 | 39.0 | 2.94e-01 | 83.3% | 96.1% |