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IMGVR_UViG_3300013383_000029-3300013383-Ga0116616_100007162
Arc-VirIMGVR_UViG_3300013383_000029-3300013383-Ga0116616_100007162
Identity
- Kingdom:
- archaea
Quality
81.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-55
Domain cluster:
rep: MG711462.1__AUV56477.1__X__00060__D5-70
CATH (73)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4dzdA02 | 3.30.70.1210 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 2 | 0.68 | 58.0 | 4.53e-01 | 100.0% | 70.7% |
| 4oc8A01 | 2.30.280.20 | Mainly Beta › Roll › PUA domain-like › | 0.67 | 58.0 | 3.91e-01 | 100.0% | 80.5% |
| 5ejlA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.66 | 55.0 | 4.37e-01 | 100.0% | 56.5% |
| 4f0qD01 | 2.30.280.20 | Mainly Beta › Roll › PUA domain-like › | 0.66 | 54.0 | 3.63e-01 | 100.0% | 52.9% |
| 2ptfA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.66 | 55.0 | 4.13e-01 | 100.0% | 62.6% |
| 1qz8A01 | 2.40.10.250 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Replicase NSP9 | 0.65 | 53.0 | 4.35e-01 | 92.6% | 51.4% |
| 2ijd101 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.65 | 52.0 | 3.63e-01 | 90.7% | 26.7% |
| 1d5aA01 | 3.30.342.10 | Alpha Beta › 2-Layer Sandwich › DNA Polymerase; Chain A, domain 1 › DNA Polymerase, chain B, domain 1 | 0.64 | 54.0 | 3.98e-01 | 96.3% | 55.6% |
| 3qjlA02 | 3.30.70.1900 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 54.0 | 4.28e-01 | 98.1% | 73.9% |
| 2bkyX00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.62 | 52.0 | 4.55e-01 | 98.1% | 68.6% |
| 4lr4A01 | 2.60.120.1420 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 53.0 | 3.74e-01 | 98.1% | 38.1% |
| 4j37A02 | 3.30.70.660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Pseudouridine synthase I, catalytic domain, C-terminal subdomain | 0.62 | 49.0 | 3.56e-01 | 96.3% | 48.9% |
| 4hudA01 | 3.30.2000.40 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser | 0.62 | 50.0 | 3.49e-01 | 98.1% | 37.1% |
| 4bsjA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 52.0 | 4.12e-01 | 100.0% | 65.0% |
| 4y6iA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 50.0 | 4.27e-01 | 100.0% | 99.0% |
| 4q52A00 | 2.60.40.3910 | Mainly Beta › Sandwich › Immunoglobulin-like › Inclusion body protein | 0.62 | 52.0 | 3.72e-01 | 100.0% | 49.1% |
| 1vm0A00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.61 | 50.0 | 4.39e-01 | 100.0% | 69.9% |
| 4e98C00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 49.0 | 4.19e-01 | 100.0% | 99.0% |
| 3ahpA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 49.0 | 4.15e-01 | 100.0% | 96.2% |
| 2gjvA00 | 3.30.2000.10 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Phage tail protein-like | 0.61 | 49.0 | 3.83e-01 | 96.3% | 94.9% |
| 2ek0A00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.61 | 48.0 | 4.19e-01 | 92.6% | 70.0% |
| 1v8cA02 | 3.30.1370.80 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Molybdopterin cofactor biosynthesis MoaD-related, C-terminal domain | 0.60 | 49.0 | 4.44e-01 | 98.1% | 81.2% |
| 1vs3A02 | 3.30.70.660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Pseudouridine synthase I, catalytic domain, C-terminal subdomain | 0.60 | 48.0 | 3.74e-01 | 98.1% | 61.8% |
| 1go3E02 | 3.30.1490.120 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RNA polymerase Rpb7-like, N-terminal domain | 0.60 | 51.0 | 4.55e-01 | 100.0% | 90.1% |
| 2ns9A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.60 | 51.0 | 3.81e-01 | 100.0% | 78.4% |
| 5c94A00 | 2.40.10.250 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Replicase NSP9 | 0.60 | 47.0 | 3.81e-01 | 92.6% | 45.7% |
| 3lvtA03 | 2.60.40.2210 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 48.0 | 3.78e-01 | 96.3% | 58.9% |
| 3fz2A00 | 3.30.70.1700 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phage minor tail protein U | 0.59 | 47.0 | 3.80e-01 | 98.1% | 57.0% |
| 3bwsA01 | 2.60.40.3070 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 44.0 | 3.88e-01 | 98.1% | 52.4% |
| 1el6A02 | 2.20.20.20 | Mainly Beta › Single Sheet › Anthopleurin-A › Baseplate structural protein gp11, C-terminal domain | 0.59 | 42.0 | 4.37e-01 | 96.3% | 93.6% |
| 3rt0C00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.59 | 48.0 | 3.56e-01 | 100.0% | 68.6% |
| 2wyhA05 | 2.60.40.2210 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 47.0 | 3.66e-01 | 92.6% | 70.1% |
| 6h05A00 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.59 | 47.0 | 3.24e-01 | 98.1% | 76.3% |
| 4noiA01 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.59 | 47.0 | 4.03e-01 | 100.0% | 63.1% |
| 3dktA01 | 3.30.2400.30 | Alpha Beta › 2-Layer Sandwich › Major capsid protein gp5 fold › | 0.58 | 48.0 | 3.53e-01 | 100.0% | 57.4% |
| 3g88A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 46.0 | 3.20e-01 | 100.0% | 24.7% |
| 3maeA00 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.58 | 46.0 | 3.20e-01 | 98.1% | 75.6% |
| 6ruiB07 | 2.40.50.150 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain | 0.58 | 46.0 | 3.71e-01 | 98.1% | 84.9% |
| 2cc6A00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.58 | 47.0 | 4.57e-01 | 98.1% | 95.3% |
| 1xzwA01 | 2.60.40.380 | Mainly Beta › Sandwich › Immunoglobulin-like › Purple acid phosphatase-like, N-terminal | 0.58 | 47.0 | 4.04e-01 | 100.0% | 64.3% |
| 2w9hA00 | 3.40.430.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A | 0.57 | 48.0 | 3.51e-01 | 96.3% | 33.1% |
| 3uc2A00 | 2.60.40.3340 | Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4426 | 0.57 | 46.0 | 3.62e-01 | 94.4% | 46.8% |
| 3l60A01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.57 | 45.0 | 3.17e-01 | 98.1% | 80.5% |
| 5axgA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.57 | 47.0 | 3.70e-01 | 98.1% | 42.9% |
| 3a27A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 45.0 | 3.16e-01 | 98.1% | 28.3% |
| 2vzyC00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.56 | 48.0 | 3.38e-01 | 100.0% | 34.9% |
| 2wzpP01 | 2.40.30.210 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.56 | 44.0 | 3.79e-01 | 100.0% | 70.6% |
| 2raqA01 | 3.30.70.1340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › MTH889-like domain | 0.56 | 45.0 | 4.06e-01 | 98.1% | 63.5% |
| 5f2kB02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 44.0 | 3.10e-01 | 96.3% | 29.9% |
| 1fp5A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 46.0 | 3.91e-01 | 100.0% | 67.0% |
| 2nrqA00 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.56 | 46.0 | 3.57e-01 | 100.0% | 48.2% |
| 2od6C00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 46.0 | 3.84e-01 | 100.0% | 66.4% |
| 1vr4E00 | 3.30.110.70 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Hypothetical protein apc22750. Chain B | 0.56 | 48.0 | 4.06e-01 | 100.0% | 83.9% |
| 1tr8A01 | 2.20.70.30 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › Nascent polypeptide-associated complex domain | 0.56 | 40.0 | 4.15e-01 | 77.8% | 86.5% |
| 1sqeA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 45.0 | 3.83e-01 | 96.3% | 65.3% |
| 2vxaA00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.55 | 45.0 | 4.33e-01 | 98.1% | 92.4% |
| 3bczA00 | 3.40.830.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protocatechuate 4,5-dioxygenase; Chain B › LigB-like | 0.55 | 45.0 | 2.95e-01 | 100.0% | 86.7% |
| 6vh5C03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.55 | 46.0 | 4.01e-01 | 100.0% | 66.3% |
| 3p02A02 | 2.40.128.440 | Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14274, DUF4361 | 0.55 | 45.0 | 3.33e-01 | 98.1% | 68.3% |
| 2p8jA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 43.0 | 3.05e-01 | 96.3% | 43.2% |
| 2qswA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.53 | 45.0 | 3.88e-01 | 98.1% | 64.4% |
| 3kvnA02 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.53 | 43.0 | 2.81e-01 | 100.0% | 28.6% |
| 3dluA00 | 3.30.56.30 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › Signal recognition particle, SRP19-like subunit | 0.53 | 44.0 | 3.75e-01 | 98.1% | 74.7% |
| 3fppA01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.53 | 41.0 | 3.55e-01 | 96.3% | 57.7% |
| 1tz0B00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 43.0 | 3.72e-01 | 100.0% | 69.1% |
| 2qrrA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.53 | 45.0 | 3.78e-01 | 98.1% | 59.8% |
| 4za1C00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 44.0 | 3.76e-01 | 98.1% | 64.1% |
| 7k0xA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 41.0 | 3.80e-01 | 100.0% | 69.2% |
| 4fomA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 43.0 | 3.64e-01 | 100.0% | 63.6% |
| 4dn9B00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 44.0 | 3.68e-01 | 98.1% | 66.0% |
| 2yqzA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 42.0 | 2.96e-01 | 96.3% | 29.5% |
| 6fokB01 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.51 | 39.0 | 2.28e-01 | 88.9% | 42.3% |
| 3ix9A00 | 3.40.430.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A | 0.51 | 42.0 | 3.09e-01 | 98.1% | 33.1% |
ECOD (77)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4118093 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.72 | 61.0 | 4.47e-01 | 100.0% | 60.6% |
| 4968263 | 1.1.5.91 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_C | 0.72 | 60.0 | 4.09e-01 | 100.0% | 68.2% |
| 4971679 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.69 | 60.0 | 3.99e-01 | 98.1% | 40.9% |
| 3687709 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.69 | 60.0 | 3.98e-01 | 100.0% | 32.4% |
| 3602499 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.69 | 58.0 | 4.50e-01 | 100.0% | 70.8% |
| 5067070 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.68 | 57.0 | 4.35e-01 | 100.0% | 70.7% |
| 4944896 | 304.51.1.1 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas_Cas6_C | 0.68 | 59.0 | 4.54e-01 | 100.0% | 74.2% |
| 5035326 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.68 | 54.0 | 4.64e-01 | 90.7% | 72.2% |
| 5027270 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.68 | 56.0 | 4.06e-01 | 100.0% | 60.0% |
| 2892215 | 5091.1.1.1 ↗ | beta sandwiches › VP4 membrane interaction domain › VP4 membrane interaction domain › VP4 membrane interaction domain › Rota_VP4_MID | 0.68 | 57.0 | 3.81e-01 | 100.0% | 38.3% |
| 3766159 | 309.1.2.1 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › ThrRS/AlaRS editing domain › tRNA_SAD | 0.67 | 55.0 | 3.81e-01 | 94.4% | 76.9% |
| 4988254 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.67 | 55.0 | 3.97e-01 | 100.0% | 55.6% |
| 4992907 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.66 | 54.0 | 4.06e-01 | 98.1% | 87.7% |
| 3604544 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.66 | 52.0 | 4.53e-01 | 88.9% | 74.1% |
| 4966854 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.65 | 53.0 | 3.24e-01 | 92.6% | 18.9% |
| 3623538 | 873.1.1.5 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › HNOB | 0.65 | 53.0 | 3.82e-01 | 98.1% | 35.0% |
| 1173463 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.65 | 53.0 | 4.72e-01 | 92.6% | 76.5% |
| 3667432 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.65 | 55.0 | 4.71e-01 | 100.0% | 63.2% |
| 2801086 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.65 | 54.0 | 3.31e-01 | 94.4% | 22.8% |
| 4958890 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.65 | 53.0 | 4.70e-01 | 92.6% | 76.2% |
| 3602774 | 304.51.1.8 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas6b_C | 0.65 | 53.0 | 4.32e-01 | 98.1% | 73.9% |
| 3253396 | 868.1.1.2 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA_triPase | 0.65 | 55.0 | 3.72e-01 | 96.3% | 50.2% |
| 3599842 | 304.12.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 | 0.65 | 53.0 | 4.31e-01 | 98.1% | 54.8% |
| 4931129 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.64 | 52.0 | 4.56e-01 | 92.6% | 76.5% |
| 4282509 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.64 | 54.0 | 3.11e-01 | 96.3% | 14.9% |
| 4932478 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.64 | 52.0 | 4.47e-01 | 92.6% | 75.6% |
| 4376759 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.64 | 51.0 | 3.46e-01 | 96.3% | 37.1% |
| 5077618 | 304.51.1.1 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas_Cas6_C | 0.64 | 54.0 | 4.21e-01 | 98.1% | 71.2% |
| 5031719 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.64 | 51.0 | 4.57e-01 | 90.7% | 72.5% |
| 4940409 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.64 | 51.0 | 4.59e-01 | 92.6% | 77.5% |
| 3174334 | 2003.1.5.73 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 | 0.64 | 53.0 | 3.53e-01 | 96.3% | 25.1% |
| 5067181 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.64 | 50.0 | 3.07e-01 | 94.4% | 19.8% |
| 4990752 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.63 | 51.0 | 4.64e-01 | 92.6% | 70.7% |
| 5053266 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.62 | 50.0 | 3.80e-01 | 100.0% | 94.4% |
| 4966859 | 304.51.1.8 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas6b_C | 0.62 | 44.0 | 4.03e-01 | 77.8% | 69.3% |
| 3601580 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.62 | 51.0 | 3.21e-01 | 100.0% | 26.6% |
| 5010581 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.61 | 51.0 | 4.14e-01 | 100.0% | 49.6% |
| 4299557 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 50.0 | 3.46e-01 | 94.4% | 42.6% |
| 327528 | 328.1.1.2 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like › SpoVS | 0.61 | 48.0 | 4.19e-01 | 92.6% | 70.0% |
| 4936600 | 304.51.1.1 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas_Cas6_C | 0.61 | 50.0 | 4.00e-01 | 98.1% | 74.2% |
| 5070955 | 304.51.1.1 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas_Cas6_C | 0.60 | 47.0 | 3.78e-01 | 100.0% | 72.1% |
| 3599730 | 304.31.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMG-CoA reductase › NAD-binding domain of HMG-CoA reductase | 0.60 | 48.0 | 3.95e-01 | 100.0% | 63.3% |
| 4982501 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.60 | 49.0 | 4.23e-01 | 98.1% | 64.2% |
| 4946264 | 323.1.1.1 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › 2-oxoacid_dh | 0.60 | 48.0 | 3.19e-01 | 96.3% | 79.6% |
| 3516207 | 327.6.1.6 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like › Secretin | 0.60 | 43.0 | 3.00e-01 | 83.3% | 27.9% |
| 3222007 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.60 | 49.0 | 2.83e-01 | 98.1% | 19.5% |
| 5024124 | 304.15.1.0 ↗ | a+b two layers › Alpha-beta plaits › Viral DNA-binding domain › Viral DNA-binding domain | 0.60 | 51.0 | 4.54e-01 | 100.0% | 68.8% |
| 3619212 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.59 | 49.0 | 3.18e-01 | 100.0% | 22.6% |
| 5076410 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.59 | 49.0 | 3.01e-01 | 96.3% | 23.0% |
| 3587593 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.59 | 49.0 | 4.40e-01 | 98.1% | 70.0% |
| 3500525 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.58 | 48.0 | 3.43e-01 | 92.6% | 93.5% |
| 5047813 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.58 | 47.0 | 3.50e-01 | 96.3% | 40.0% |
| 4656132 | 3124.1.1.1 ↗ | beta sandwiches › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › NAC | 0.58 | 43.0 | 4.01e-01 | 77.8% | 70.8% |
| 5063605 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.58 | 48.0 | 3.01e-01 | 98.1% | 19.1% |
| 3972051 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 46.0 | 3.69e-01 | 100.0% | 45.4% |
| 4004140 | 389.4.1.7 ↗ | few secondary structure elements › EGF-like › Fibulin-4 EGF-like 1 domain › Fibulin-4 EGF-like 1 domain › TIL_2 | 0.57 | 47.0 | 4.46e-01 | 100.0% | 77.1% |
| 4928098 | 3124.1.1.1 ↗ | beta sandwiches › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › NAC | 0.57 | 38.0 | 4.15e-01 | 70.4% | 86.7% |
| 4947872 | 3124.1.1.2 ↗ | beta sandwiches › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › UBA_HYPK | 0.57 | 41.0 | 3.90e-01 | 77.8% | 69.2% |
| 4167790 | 3124.1.1.1 ↗ | beta sandwiches › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › NAC | 0.57 | 41.0 | 4.00e-01 | 77.8% | 75.0% |
| 3995786 | 389.4.1.7 ↗ | few secondary structure elements › EGF-like › Fibulin-4 EGF-like 1 domain › Fibulin-4 EGF-like 1 domain › TIL_2 | 0.57 | 44.0 | 4.26e-01 | 100.0% | 76.9% |
| 4003790 | 330.1.1.2 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Ribosomal_S5 | 0.56 | 39.0 | 3.30e-01 | 75.9% | 49.5% |
| 4943905 | 323.1.1.1 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › 2-oxoacid_dh | 0.56 | 44.0 | 2.98e-01 | 96.3% | 77.4% |
| 5036907 | 3124.1.1.1 ↗ | beta sandwiches › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › NAC | 0.56 | 40.0 | 3.90e-01 | 75.9% | 71.7% |
| 5009731 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.56 | 43.0 | 3.01e-01 | 98.1% | 69.0% |
| 5080540 | 3124.1.1.1 ↗ | beta sandwiches › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › NAC | 0.55 | 42.0 | 4.39e-01 | 81.5% | 92.0% |
| 5048854 | 323.1.1.1 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › 2-oxoacid_dh | 0.55 | 43.0 | 2.89e-01 | 96.3% | 77.7% |
| 3602961 | 3124.1.1.1 ↗ | beta sandwiches › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › NAC | 0.55 | 39.0 | 4.21e-01 | 75.9% | 91.1% |
| 3270041 | 872.3.1.7 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_4 | 0.55 | 43.0 | 3.55e-01 | 90.7% | 98.1% |
| 5022644 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.54 | 43.0 | 3.73e-01 | 96.3% | 58.9% |
| 4982969 | 3124.1.1.0 ↗ | beta sandwiches › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain | 0.54 | 39.0 | 4.03e-01 | 77.8% | 90.0% |
| 4961266 | 3124.1.1.1 ↗ | beta sandwiches › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › NAC | 0.53 | 37.0 | 4.03e-01 | 74.1% | 95.6% |
| 4441129 | 1.1.7.91 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 | 0.53 | 42.0 | 3.45e-01 | 98.1% | 59.2% |
| 4951060 | 3124.1.1.1 ↗ | beta sandwiches › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › NAC | 0.52 | 39.0 | 3.71e-01 | 81.5% | 73.8% |
| 3256333 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 37.0 | 3.14e-01 | 100.0% | 41.9% |
| 5066523 | 3124.1.1.1 ↗ | beta sandwiches › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › NAC | 0.52 | 35.0 | 3.74e-01 | 70.4% | 91.1% |
| 3991838 | 389.1.1.47 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › TIL_2 | 0.51 | 41.0 | 4.03e-01 | 100.0% | 96.8% |
| 3936404 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.50 | 42.0 | 3.51e-01 | 96.3% | 60.0% |
D2
medium
residues 56-133
Domain cluster:
representative
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1lrzA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.88 | 61.0 | 6.79e-01 | 71.8% | 95.2% |
| 5b1oA00 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.86 | 61.0 | 6.59e-01 | 76.9% | 87.7% |
| 1x4tA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.84 | 57.0 | 6.59e-01 | 70.5% | 100.0% |
| 3na7A00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.84 | 63.0 | 4.33e-01 | 78.2% | 28.7% |
| 2lm9A00 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.84 | 63.0 | 5.81e-01 | 78.2% | 71.9% |
| 1cxzB00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.83 | 62.0 | 5.99e-01 | 78.2% | 80.2% |
| 3fxdB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.81 | 58.0 | 6.61e-01 | 96.2% | 100.0% |
| 2e9xA01 | 1.20.58.1030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.81 | 59.0 | 4.94e-01 | 76.9% | 48.4% |
| 2i0mA02 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.80 | 59.0 | 5.38e-01 | 76.9% | 62.4% |
| 2x0cA01 | 1.20.1420.10 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain | 0.80 | 71.0 | 5.34e-01 | 96.2% | 84.3% |
| 4abxA02 | 6.10.140.1090 | Special › Helix non-globular › Helix Hairpins › | 0.78 | 57.0 | 5.51e-01 | 76.9% | 71.3% |
| 3vkgA12 | 1.10.287.2610 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.77 | 59.0 | 4.23e-01 | 80.8% | 98.1% |
| 4biuE01 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.77 | 57.0 | 5.27e-01 | 78.2% | 66.3% |
| 1rq0A01 | 6.10.140.160 | Special › Helix non-globular › Helix Hairpins › | 0.76 | 61.0 | 6.05e-01 | 87.2% | 94.0% |
| 1xwjA01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.76 | 63.0 | 5.28e-01 | 89.7% | 55.4% |
| 2mpkA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.75 | 54.0 | 5.54e-01 | 76.9% | 78.4% |
| 1ucuA01 | 6.10.280.190 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.75 | 53.0 | 5.62e-01 | 74.4% | 100.0% |
| 1h6gA01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.75 | 61.0 | 5.27e-01 | 88.5% | 61.3% |
| 1ydxA02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.74 | 55.0 | 5.27e-01 | 78.2% | 76.7% |
| 7ymiZ01 | 1.10.287.740 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Photosystem II PsbZ, reaction centre | 0.74 | 52.0 | 5.80e-01 | 74.4% | 98.3% |
| 4iggA01 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.73 | 55.0 | 5.90e-01 | 83.3% | 94.0% |
| 1qgtB00 | 1.10.4090.10 | Mainly Alpha › Orthogonal Bundle › Hepatitis B viral capsid (hbcag) fold › Viral capsid, core domain supefamily, Hepatitis B virus | 0.72 | 60.0 | 4.86e-01 | 89.7% | 53.1% |
| 4id0A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.71 | 55.0 | 4.85e-01 | 84.6% | 57.1% |
| 2lw1A00 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.71 | 50.0 | 4.91e-01 | 74.4% | 91.8% |
| 4l8jA04 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.70 | 50.0 | 5.49e-01 | 82.1% | 100.0% |
| 4yjwA00 | 1.20.120.930 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein PF12889, N-terminal DUF3829 | 0.70 | 57.0 | 4.66e-01 | 92.3% | 54.9% |
| 1vs5O00 | 1.10.287.10 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding | 0.69 | 53.0 | 5.10e-01 | 98.7% | 72.7% |
| 1sj8A02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.68 | 55.0 | 4.81e-01 | 89.7% | 58.2% |
| 4iggB02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.68 | 58.0 | 4.99e-01 | 93.6% | 64.5% |
| 2yqyA00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.68 | 54.0 | 4.57e-01 | 84.6% | 80.2% |
| 3e0sA00 | 1.40.20.10 | Mainly Alpha › Alpha solenoid › CHAD domain › CHAD domain | 0.68 | 62.0 | 4.13e-01 | 100.0% | 79.4% |
| 5fmnA00 | 1.20.58.1000 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer | 0.68 | 55.0 | 5.38e-01 | 88.5% | 94.2% |
| 1lqsL01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.67 | 47.0 | 4.36e-01 | 97.4% | 58.0% |
| 2dnxA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 58.0 | 4.81e-01 | 97.4% | 56.2% |
| 1cm5A00 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.66 | 62.0 | 3.51e-01 | 100.0% | 31.6% |
| 3q18A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.65 | 50.0 | 4.43e-01 | 84.6% | 56.9% |
| 1j1jA02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.64 | 42.0 | 4.12e-01 | 94.9% | 61.2% |
| 3dcfA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.63 | 45.0 | 3.70e-01 | 80.8% | 41.5% |
| 3n2oA04 | 1.10.287.3440 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.59 | 35.0 | 4.04e-01 | 75.6% | 86.5% |
| 3uj9A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 48.0 | 3.34e-01 | 94.9% | 81.8% |
ECOD (66)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3623351 | 192.29.1.1 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB_dom | 0.82 | 60.0 | 5.89e-01 | 76.9% | 72.9% |
| 3598650 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.82 | 61.0 | 5.68e-01 | 78.2% | 68.4% |
| 3671258 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.82 | 63.0 | 5.19e-01 | 80.8% | 50.0% |
| 5056869 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.81 | 61.0 | 4.62e-01 | 79.5% | 69.1% |
| 3612941 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.80 | 62.0 | 4.99e-01 | 80.8% | 51.4% |
| 5025813 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.80 | 65.0 | 5.77e-01 | 87.2% | 85.5% |
| 4429833 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.80 | 65.0 | 5.75e-01 | 87.2% | 84.5% |
| 4110549 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.79 | 64.0 | 5.65e-01 | 85.9% | 84.5% |
| 4304756 | 605.2.1.3 ↗ | alpha duplicates or obligate multimers › ROP-like › Hypothetical protein D-63 › Hypothetical protein D-63 › Seryl_tRNA_N | 0.79 | 64.0 | 5.65e-01 | 85.9% | 85.5% |
| 4335871 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.79 | 63.0 | 5.58e-01 | 85.9% | 86.4% |
| 3331953 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.78 | 68.0 | 5.43e-01 | 100.0% | 49.3% |
| 3401214 | 3755.3.1.345 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Hobbit | 0.78 | 64.0 | 5.18e-01 | 88.5% | 71.7% |
| 4937169 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.78 | 62.0 | 5.54e-01 | 85.9% | 86.4% |
| 3682989 | 5086.1.1.96 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › DUF632 | 0.78 | 66.0 | 5.29e-01 | 91.0% | 84.1% |
| 3201381 | 192.8.1.139 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › Fung_rhodopsin | 0.78 | 58.0 | 5.97e-01 | 82.1% | 82.7% |
| 4169998 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.77 | 66.0 | 5.95e-01 | 92.3% | 89.5% |
| 4944269 | 3456.1.1.0 ↗ | extended segments › NADH-quinone oxidoreductase subunit A › NADH-quinone oxidoreductase subunit A › NADH-quinone oxidoreductase subunit A | 0.77 | 59.0 | 5.05e-01 | 84.6% | 52.5% |
| 4667192 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.77 | 66.0 | 6.16e-01 | 92.3% | 82.1% |
| 4665988 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.77 | 62.0 | 5.59e-01 | 85.9% | 87.6% |
| 3741234 | 605.2.1.3 ↗ | alpha duplicates or obligate multimers › ROP-like › Hypothetical protein D-63 › Hypothetical protein D-63 › Seryl_tRNA_N | 0.77 | 66.0 | 5.78e-01 | 93.6% | 87.8% |
| 4274516 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.77 | 65.0 | 5.83e-01 | 91.0% | 87.6% |
| 4497069 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.77 | 61.0 | 5.53e-01 | 85.9% | 84.8% |
| 3714244 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.76 | 55.0 | 6.21e-01 | 93.6% | 98.3% |
| 5082774 | 4323.1.1.0 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C | 0.76 | 62.0 | 4.88e-01 | 85.9% | 64.7% |
| 4530342 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.76 | 64.0 | 5.79e-01 | 91.0% | 88.6% |
| 4175087 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.76 | 61.0 | 5.46e-01 | 87.2% | 84.5% |
| 4389261 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.76 | 65.0 | 5.92e-01 | 92.3% | 94.0% |
| 4963258 | 3843.1.1.0 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K | 0.76 | 60.0 | 5.82e-01 | 96.2% | 77.6% |
| 3389783 | 5030.1.1.0 ↗ | extended segments › Photosystem II reaction center protein L, PsbL › Photosystem II reaction center protein L, PsbL › Photosystem II reaction center protein L, PsbL | 0.76 | 57.0 | 5.12e-01 | 79.5% | 67.6% |
| 3729994 | 3755.3.1.284 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Utp11 | 0.75 | 57.0 | 4.77e-01 | 80.8% | 50.0% |
| 3416429 | 2004.1.1.442 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21 | 0.75 | 57.0 | 3.54e-01 | 80.8% | 16.2% |
| 3513582 | 192.8.1.36 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › M_domain | 0.75 | 65.0 | 5.86e-01 | 98.7% | 81.8% |
| 3189035 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.75 | 54.0 | 5.51e-01 | 83.3% | 78.7% |
| 4295915 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.74 | 56.0 | 4.73e-01 | 80.8% | 93.1% |
| 3283574 | 150.8.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PPE › PPE › PPE | 0.74 | 56.0 | 4.09e-01 | 80.8% | 64.8% |
| 4536670 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.73 | 56.0 | 4.67e-01 | 80.8% | 48.5% |
| 5027469 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.73 | 64.0 | 3.90e-01 | 96.2% | 15.9% |
| 4681786 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.73 | 61.0 | 5.49e-01 | 91.0% | 88.6% |
| 3272219 | 601.1.2.6 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › Talin_IBS2B | 0.73 | 64.0 | 5.08e-01 | 98.7% | 89.4% |
| 3840138 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.73 | 61.0 | 5.66e-01 | 92.3% | 89.0% |
| 2388286 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.73 | 58.0 | 6.00e-01 | 85.9% | 95.8% |
| 3191420 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.72 | 55.0 | 5.88e-01 | 82.1% | 96.9% |
| 3775580 | 601.1.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › Vinculin | 0.72 | 59.0 | 6.03e-01 | 88.5% | 94.7% |
| 4612374 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.72 | 59.0 | 5.68e-01 | 89.7% | 98.9% |
| 3461765 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.72 | 58.0 | 5.17e-01 | 100.0% | 62.0% |
| 3618558 | 4177.1.1.2 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR | 0.72 | 58.0 | 4.26e-01 | 88.5% | 71.9% |
| 4013672 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.72 | 63.0 | 5.82e-01 | 97.4% | 91.0% |
| 3781132 | 3755.4.1.48 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › V_ATPase_I | 0.72 | 60.0 | 4.79e-01 | 91.0% | 74.0% |
| 4886424 | 304.116.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in release factor › Ferredoxin-like domain in release factor › PCRF | 0.71 | 61.0 | 5.62e-01 | 93.6% | 93.0% |
| 4846660 | 192.18.1.1 ↗ | alpha bundles › Long alpha-hairpin › MxiH-like › MxiH-like › T3SS_needle_F | 0.71 | 52.0 | 5.37e-01 | 78.2% | 83.8% |
| 3231463 | 632.8.1.2 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › Alpha-2-MRAP_C | 0.71 | 59.0 | 5.59e-01 | 93.6% | 94.7% |
| 5006970 | 4323.1.1.0 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C | 0.71 | 56.0 | 4.65e-01 | 87.2% | 69.3% |
| 3230496 | 605.4.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein | 0.70 | 56.0 | 5.49e-01 | 88.5% | 80.0% |
| 4393970 | 192.15.1.46 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Ribophorin_II_C | 0.70 | 53.0 | 4.75e-01 | 89.7% | 58.2% |
| 4557944 | 150.1.1.193 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Ribophorin_II_C | 0.69 | 53.0 | 5.02e-01 | 89.7% | 68.4% |
| 3326008 | 5086.1.1.96 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › DUF632 | 0.69 | 57.0 | 5.35e-01 | 94.9% | 85.0% |
| 4097040 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.68 | 56.0 | 5.17e-01 | 91.0% | 92.0% |
| 4176312 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.68 | 54.0 | 5.07e-01 | 89.7% | 91.0% |
| 4119449 | 109.4.1.1151 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HIR3_helical | 0.67 | 60.0 | 3.99e-01 | 97.4% | 46.3% |
| 3241745 | 192.29.1.172 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › PF29678 | 0.67 | 50.0 | 4.06e-01 | 80.8% | 42.6% |
| 3935107 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.66 | 55.0 | 5.01e-01 | 96.2% | 81.8% |
| 4369223 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.66 | 57.0 | 3.79e-01 | 96.2% | 73.5% |
| 5031927 | 5057.1.1.0 ↗ | alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore | 0.64 | 53.0 | 5.24e-01 | 94.9% | 91.8% |
| 4427461 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.64 | 53.0 | 4.95e-01 | 93.6% | 85.0% |
| 3884035 | 611.2.1.0 ↗ | alpha bundles › N-cbl like › N-terminal domain of cbl (N-cbl) › N-terminal domain of cbl (N-cbl) | 0.61 | 56.0 | 4.72e-01 | 98.7% | 90.4% |
| 4304409 | 109.4.1.1151 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HIR3_helical | 0.60 | 53.0 | 3.60e-01 | 100.0% | 46.2% |