←Back to structures
IMGVR_UViG_3300013426_000003-3300013426-Ga0116649_100004346
Arc-VirIMGVR_UViG_3300013426_000003-3300013426-Ga0116649_100004346
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-90
D2
high
residues 97-186
Domain cluster:
rep: IMGVR_UViG_3300014039_000036-3300014039-Ga0116646_100011759__D153-241
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4it1B01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.51 | 39.0 | 3.32e-01 | 100.0% | 48.4% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4033826 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.82 | 69.0 | 6.83e-01 | 100.0% | 85.3% |
| 3278365 | 191.1.1.33 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_31 | 0.55 | 46.0 | 4.27e-01 | 93.3% | 71.3% |
D3
high
residues 435-527
Domain cluster:
rep: IMGVR_UViG_3300014039_000036-3300014039-Ga0116646_100011759__D492-571
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4kt5C00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 45.0 | 4.67e-01 | 92.5% | 81.8% |
| 2dqlA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 51.0 | 4.72e-01 | 92.5% | 72.2% |
| 4esbA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 49.0 | 4.80e-01 | 93.5% | 78.6% |
| 5deqB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 46.0 | 4.81e-01 | 90.3% | 91.6% |
| 3u1dB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 51.0 | 4.50e-01 | 95.7% | 87.4% |
| 6abqB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 49.0 | 4.70e-01 | 93.5% | 78.3% |
| 7xc2A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 50.0 | 4.86e-01 | 92.5% | 81.1% |
| 6kf9G01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 44.0 | 4.70e-01 | 94.6% | 90.2% |
| 2qbyA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 48.0 | 4.87e-01 | 92.5% | 91.1% |
| 2l2oA00 | 1.10.10.1540 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Costar domain | 0.57 | 45.0 | 4.74e-01 | 92.5% | 94.1% |
| 1bm9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 47.0 | 4.35e-01 | 92.5% | 70.8% |
| 2avdA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 41.0 | 3.10e-01 | 81.7% | 32.4% |
| 3ktwB00 | 3.30.56.30 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › Signal recognition particle, SRP19-like subunit | 0.55 | 38.0 | 3.82e-01 | 71.0% | 74.2% |
| 2zihC00 | 1.10.3630.10 | Mainly Alpha › Orthogonal Bundle › yeast vps74-n-term truncation variant fold › yeast vps74-n-term truncation variant domain like | 0.54 | 40.0 | 2.87e-01 | 77.4% | 93.5% |
| 1if1B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 44.0 | 4.32e-01 | 91.4% | 100.0% |
| 6le1A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.54 | 26.0 | 2.93e-01 | 84.9% | 55.9% |
| 1repC02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 46.0 | 4.67e-01 | 94.6% | 97.8% |
| 6lbsB01 | 3.30.1370.230 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Stn1, C-terminal wHTH domain | 0.53 | 42.0 | 4.45e-01 | 96.8% | 100.0% |
| 3hhwK01 | 1.10.3570.10 | Mainly Alpha › Orthogonal Bundle › Rhabdovirus nucleoprotein-like fold › Rhabdovirus nucleocapsid protein like domain | 0.52 | 39.0 | 3.16e-01 | 80.6% | 85.2% |
| 2krhA00 | 1.10.10.1540 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Costar domain | 0.51 | 38.0 | 3.96e-01 | 86.0% | 87.1% |
| 7dvbA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.51 | 38.0 | 2.60e-01 | 79.6% | 52.3% |
| 3o66B01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.51 | 38.0 | 3.24e-01 | 86.0% | 45.2% |
| 4ne4A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.51 | 39.0 | 3.26e-01 | 83.9% | 46.1% |
ECOD (80)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4017175 | 101.1.2.312 ↗ | alpha arrays › HTH › HTH › winged helix domain › MSC | 0.68 | 56.0 | 4.09e-01 | 89.2% | 35.5% |
| 3516107 | 101.1.2.312 ↗ | alpha arrays › HTH › HTH › winged helix domain › MSC | 0.67 | 53.0 | 4.93e-01 | 84.9% | 71.3% |
| 3887336 | 101.1.4.12 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › MSC | 0.66 | 55.0 | 4.14e-01 | 90.3% | 37.8% |
| 3735293 | 101.1.2.312 ↗ | alpha arrays › HTH › HTH › winged helix domain › MSC | 0.66 | 56.0 | 4.04e-01 | 92.5% | 34.2% |
| 3174361 | 101.1.2.312 ↗ | alpha arrays › HTH › HTH › winged helix domain › MSC | 0.65 | 51.0 | 3.83e-01 | 86.0% | 34.0% |
| 3843442 | 101.1.2.312 ↗ | alpha arrays › HTH › HTH › winged helix domain › MSC | 0.65 | 50.0 | 4.58e-01 | 83.9% | 64.8% |
| 5046134 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 51.0 | 4.37e-01 | 93.5% | 53.8% |
| 4947062 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 50.0 | 5.05e-01 | 93.5% | 82.1% |
| 5059914 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 50.0 | 4.89e-01 | 93.5% | 76.0% |
| 4537424 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 49.0 | 4.90e-01 | 89.2% | 80.0% |
| 4556736 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.64 | 45.0 | 5.00e-01 | 86.0% | 97.1% |
| 4997255 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 50.0 | 4.95e-01 | 93.5% | 79.0% |
| 3929969 | 101.1.2.4 ↗ | alpha arrays › HTH › HTH › winged helix domain › Forkhead | 0.63 | 51.0 | 4.16e-01 | 92.5% | 45.8% |
| 3282970 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 43.0 | 4.95e-01 | 77.4% | 100.0% |
| 3209919 | 101.1.2.4 ↗ | alpha arrays › HTH › HTH › winged helix domain › Forkhead | 0.63 | 53.0 | 5.22e-01 | 92.5% | 86.0% |
| 3432076 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.63 | 53.0 | 4.98e-01 | 91.4% | 76.4% |
| 3287678 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.63 | 46.0 | 4.92e-01 | 84.9% | 88.7% |
| 3434805 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.63 | 53.0 | 5.09e-01 | 91.4% | 84.8% |
| 2056822 | 101.1.2.213 ↗ | alpha arrays › HTH › HTH › winged helix domain › NrtR_WHD | 0.63 | 45.0 | 4.93e-01 | 84.9% | 93.4% |
| 3586609 | 101.1.2.278 ↗ | alpha arrays › HTH › HTH › winged helix domain › CNDH2_C | 0.63 | 51.0 | 4.70e-01 | 95.7% | 68.9% |
| 3422147 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.62 | 52.0 | 3.45e-01 | 91.4% | 22.9% |
| 3265825 | 101.1.2.65 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rad21_Rec8 | 0.62 | 53.0 | 5.39e-01 | 95.7% | 95.6% |
| 3926419 | 101.1.2.4 ↗ | alpha arrays › HTH › HTH › winged helix domain › Forkhead | 0.62 | 52.0 | 4.72e-01 | 92.5% | 68.0% |
| 1107232 | 101.1.2.84 ↗ | alpha arrays › HTH › HTH › winged helix domain › CaiF_GrlA | 0.62 | 45.0 | 4.67e-01 | 92.5% | 81.8% |
| 3797700 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 49.0 | 4.87e-01 | 92.5% | 81.0% |
| 3501318 | 101.1.2.394 ↗ | alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 | 0.62 | 56.0 | 3.69e-01 | 100.0% | 66.4% |
| 3484758 | 101.1.2.4 ↗ | alpha arrays › HTH › HTH › winged helix domain › Forkhead | 0.62 | 51.0 | 4.24e-01 | 92.5% | 51.9% |
| 3181634 | 101.1.2.148 ↗ | alpha arrays › HTH › HTH › winged helix domain › ORC5_C | 0.62 | 51.0 | 4.48e-01 | 91.4% | 78.3% |
| 5026539 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 47.0 | 4.79e-01 | 91.4% | 84.4% |
| 164542 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.61 | 51.0 | 4.72e-01 | 92.5% | 72.2% |
| 4120250 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 45.0 | 4.79e-01 | 84.9% | 90.0% |
| 5075771 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.61 | 51.0 | 4.85e-01 | 93.5% | 77.3% |
| 3602364 | 101.1.15.0 ↗ | alpha arrays › HTH › HTH › HAT1, C-terminal domain | 0.61 | 49.0 | 5.01e-01 | 92.5% | 90.0% |
| 4981949 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 46.0 | 4.90e-01 | 89.2% | 93.8% |
| 4443506 | 101.1.2.517 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82, HTH_9, POLR3C_WHD | 0.60 | 48.0 | 3.17e-01 | 100.0% | 20.0% |
| 3610083 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 48.0 | 4.77e-01 | 93.5% | 82.0% |
| 3895552 | 101.1.2.4 ↗ | alpha arrays › HTH › HTH › winged helix domain › Forkhead | 0.60 | 50.0 | 4.48e-01 | 90.3% | 66.2% |
| 5077356 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 51.0 | 4.66e-01 | 93.5% | 71.2% |
| 3628907 | 101.1.2.394 ↗ | alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 | 0.60 | 48.0 | 2.76e-01 | 96.8% | 8.1% |
| 5029778 | 101.1.2.43 ↗ | alpha arrays › HTH › HTH › winged helix domain › Pox_D5 | 0.60 | 46.0 | 4.74e-01 | 84.9% | 85.6% |
| 3941213 | 101.1.2.506 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_NWD1 | 0.60 | 50.0 | 4.91e-01 | 91.4% | 86.0% |
| 4978533 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.60 | 50.0 | 4.45e-01 | 93.5% | 63.7% |
| 3633871 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 51.0 | 3.92e-01 | 93.5% | 44.0% |
| 3963083 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 49.0 | 4.28e-01 | 89.2% | 60.7% |
| 4994432 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 46.0 | 4.47e-01 | 91.4% | 74.3% |
| 3519677 | 101.1.2.4 ↗ | alpha arrays › HTH › HTH › winged helix domain › Forkhead | 0.59 | 50.0 | 4.36e-01 | 92.5% | 70.0% |
| 3924465 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 49.0 | 4.53e-01 | 91.4% | 75.0% |
| 4012917 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 48.0 | 4.83e-01 | 93.5% | 88.4% |
| 3785251 | 101.1.2.124 ↗ | alpha arrays › HTH › HTH › winged helix domain › Kin17_mid | 0.58 | 51.0 | 4.52e-01 | 100.0% | 67.4% |
| 4960288 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.58 | 48.0 | 3.88e-01 | 93.5% | 47.4% |
| 3164764 | 2008.1.1.168 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF30184 | 0.58 | 46.0 | 4.78e-01 | 93.5% | 94.1% |
| 4954006 | 101.1.2.554 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF30184 | 0.58 | 46.0 | 4.64e-01 | 93.5% | 85.3% |
| 4970516 | 2003.6.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like | 0.58 | 51.0 | 4.49e-01 | 100.0% | 73.6% |
| 3947737 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 48.0 | 4.61e-01 | 92.5% | 88.2% |
| 4953109 | 101.1.2.554 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF30184 | 0.57 | 46.0 | 4.60e-01 | 91.4% | 85.3% |
| 3481547 | 101.1.2.68 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 | 0.57 | 50.0 | 4.36e-01 | 100.0% | 66.7% |
| 4966558 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 45.0 | 4.73e-01 | 93.5% | 94.1% |
| 2639344 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.57 | 48.0 | 4.52e-01 | 93.5% | 76.1% |
| 3285760 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.57 | 46.0 | 3.76e-01 | 92.5% | 45.6% |
| 4976186 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.57 | 49.0 | 4.12e-01 | 93.5% | 59.4% |
| 3269532 | 101.1.2.151 ↗ | alpha arrays › HTH › HTH › winged helix domain › COR | 0.57 | 46.0 | 4.83e-01 | 90.3% | 98.8% |
| 2609 | 101.1.2.38 ↗ | alpha arrays › HTH › HTH › winged helix domain › RTP | 0.57 | 47.0 | 4.35e-01 | 92.5% | 70.8% |
| 3935690 | 101.1.2.111 ↗ | alpha arrays › HTH › HTH › winged helix domain › RQC | 0.57 | 48.0 | 4.30e-01 | 93.5% | 81.5% |
| 3788427 | 101.1.2.207 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFC3_eWH | 0.57 | 46.0 | 4.54e-01 | 91.4% | 83.0% |
| 3614121 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 43.0 | 4.37e-01 | 84.9% | 82.1% |
| 4620040 | 101.1.2.187 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rep3_C | 0.57 | 50.0 | 4.83e-01 | 100.0% | 88.6% |
| 3509042 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 49.0 | 4.40e-01 | 96.8% | 79.2% |
| 4022514 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 45.0 | 4.33e-01 | 88.2% | 76.4% |
| 3933222 | 101.1.2.111 ↗ | alpha arrays › HTH › HTH › winged helix domain › RQC | 0.56 | 48.0 | 4.09e-01 | 95.7% | 68.4% |
| 4983906 | 101.1.2.554 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF30184 | 0.56 | 43.0 | 4.35e-01 | 94.6% | 83.2% |
| 5053363 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 47.0 | 4.16e-01 | 96.8% | 72.9% |
| 3730463 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 46.0 | 4.17e-01 | 95.7% | 79.2% |
| 3740624 | 101.1.2.111 ↗ | alpha arrays › HTH › HTH › winged helix domain › RQC | 0.54 | 46.0 | 4.23e-01 | 95.7% | 83.2% |
| 3493458 | 101.1.2.236 ↗ | alpha arrays › HTH › HTH › winged helix domain › POLR3C_WHD | 0.54 | 48.0 | 4.10e-01 | 100.0% | 88.7% |
| 4981191 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.54 | 30.0 | 3.36e-01 | 71.0% | 70.0% |
| None | — | 0.53 | 43.0 | 3.22e-01 | 88.2% | 36.5% | |
| 4936984 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 46.0 | 4.32e-01 | 100.0% | 79.7% |
| 4974744 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.53 | 47.0 | 3.82e-01 | 100.0% | 86.9% |
| 4974063 | 304.4.1.20 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg2 | 0.51 | 31.0 | 3.14e-01 | 71.0% | 58.9% |
| 3980386 | 7523.1.1.17 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › OpuAC | 0.50 | 38.0 | 3.20e-01 | 87.1% | 44.8% |
D4
medium
residues 201-254_379-434
Domain cluster:
rep: OR188719.1__WNO25026.1__NKJIMNAM_00045__00045__D431-480_602-648
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2p9bA04 | 1.20.58.520 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Amidohydrolase | 0.55 | 36.0 | 3.94e-01 | 71.8% | 80.4% |
| 3q2qA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.55 | 41.0 | 2.94e-01 | 98.2% | 27.4% |
| 5xn6D00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.53 | 47.0 | 3.52e-01 | 98.2% | 39.8% |
| 4kk2B00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.52 | 45.0 | 3.27e-01 | 97.3% | 44.6% |
| 1v4eA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.50 | 45.0 | 3.36e-01 | 100.0% | 89.6% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 138184 | 141.1.1.0 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases | 0.54 | 49.0 | 3.70e-01 | 100.0% | 82.2% |
| 3953625 | 191.1.1.48 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_46 | 0.53 | 36.0 | 3.46e-01 | 92.7% | 60.0% |
| 4939861 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.51 | 45.0 | 3.37e-01 | 98.2% | 51.1% |
| 4047576 | 3355.1.1.21 ↗ | alpha complex topology › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › Na_sulph_symp, CitMHS | 0.51 | 44.0 | 3.00e-01 | 98.2% | 84.6% |
D5
medium
residues 255-378
Domain cluster:
rep: highly_derived_D5-like_helicase-primase__YP_003406787__Marseillevirus_marseillevirus__694581__D555-677
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05272.18 best | VapE-like_dom | 114.5 | 6.80e-33 | 100.0% | 53.9% |
| PF19263.6 | DUF5906 | 34.5 | 3.90e-08 | 87.9% | 100.0% |