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IMGVR_UViG_3300014039_000036-3300014039-Ga0116646_100011731
Arc-VirIMGVR_UViG_3300014039_000036-3300014039-Ga0116646_100011731
Identity
- Kingdom:
- archaea
Quality
66.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 743-822
Domain cluster:
rep: NC_030951.1__YP_009277397.1__phiCTC2B_56__00056__D44-123
CATH (47)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2r6hA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.64 | 56.0 | 4.69e-01 | 100.0% | 99.3% |
| 3ne5C02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.64 | 55.0 | 5.09e-01 | 95.0% | 93.1% |
| 5zl6A01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.64 | 56.0 | 4.57e-01 | 98.8% | 86.8% |
| 2gpjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.64 | 55.0 | 5.19e-01 | 98.8% | 98.0% |
| 3km3B00 | 2.70.40.10 | Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) | 0.64 | 55.0 | 4.52e-01 | 100.0% | 88.5% |
| 3lnnA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.63 | 56.0 | 5.38e-01 | 100.0% | 98.9% |
| 6mv2A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.62 | 54.0 | 4.97e-01 | 98.8% | 100.0% |
| 4lusB01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.62 | 53.0 | 4.42e-01 | 98.8% | 81.2% |
| 2oo4A02 | 3.30.70.3310 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 45.0 | 4.05e-01 | 77.5% | 91.0% |
| 3gwqA01 | 2.40.37.20 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › D-serine dehydratase-like domain | 0.61 | 54.0 | 4.25e-01 | 100.0% | 66.1% |
| 4qpwA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.60 | 53.0 | 4.43e-01 | 100.0% | 95.8% |
| 1qfjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.60 | 51.0 | 4.97e-01 | 98.8% | 95.6% |
| 4dqlB01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.59 | 52.0 | 4.73e-01 | 100.0% | 95.4% |
| 5gxuB01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.59 | 52.0 | 4.54e-01 | 98.8% | 92.6% |
| 3mmlF01 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.58 | 49.0 | 5.01e-01 | 97.5% | 96.2% |
| 1xxaC00 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.58 | 48.0 | 5.02e-01 | 92.5% | 100.0% |
| 8deeJ01 | 2.60.40.350 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 48.0 | 4.78e-01 | 96.2% | 89.3% |
| 1bdfA01 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.58 | 48.0 | 4.42e-01 | 93.8% | 86.8% |
| 5jbdA03 | 3.20.20.470 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glucansucrase | 0.57 | 49.0 | 3.18e-01 | 98.8% | 21.6% |
| 3kewA01 | 2.40.30.130 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.57 | 47.0 | 4.67e-01 | 95.0% | 90.5% |
| 4rlzA02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.56 | 47.0 | 4.33e-01 | 98.8% | 99.1% |
| 4mloA01 | 2.60.120.810 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 39.0 | 3.15e-01 | 100.0% | 36.5% |
| 6j0qA02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.56 | 47.0 | 4.36e-01 | 100.0% | 98.2% |
| 2r15A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 46.0 | 4.22e-01 | 100.0% | 67.6% |
| 1shsA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 41.0 | 3.71e-01 | 80.0% | 85.2% |
| 1ow0A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 48.0 | 4.50e-01 | 100.0% | 86.0% |
| 4zciA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.55 | 45.0 | 4.29e-01 | 93.8% | 90.1% |
| 1ufwA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.55 | 42.0 | 4.05e-01 | 83.7% | 77.9% |
| 2wuhA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 46.0 | 3.81e-01 | 100.0% | 92.6% |
| 2e8yA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.55 | 37.0 | 3.63e-01 | 100.0% | 63.3% |
| 3bc9A04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.54 | 41.0 | 4.02e-01 | 98.8% | 75.0% |
| 1d1nA00 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 45.0 | 4.31e-01 | 100.0% | 92.9% |
| 1g7sA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.53 | 45.0 | 4.17e-01 | 98.8% | 87.0% |
| 4hltA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 37.0 | 3.01e-01 | 100.0% | 36.2% |
| 2ds4A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 44.0 | 4.08e-01 | 96.2% | 84.8% |
| 4b9iA00 | 2.60.40.3480 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 44.0 | 3.95e-01 | 100.0% | 88.8% |
| 3ndzE00 | 2.60.40.290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 45.0 | 4.16e-01 | 100.0% | 93.5% |
| 2y23A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 42.0 | 3.93e-01 | 97.5% | 70.2% |
| 4gaaA01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.52 | 42.0 | 3.33e-01 | 100.0% | 39.4% |
| 8b6zA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.51 | 41.0 | 4.16e-01 | 95.0% | 100.0% |
| 3njfA00 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.51 | 44.0 | 4.00e-01 | 100.0% | 81.2% |
| 2z1pA01 | 2.60.40.1280 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 42.0 | 3.60e-01 | 93.8% | 85.4% |
| 1imhC02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 44.0 | 4.09e-01 | 100.0% | 82.1% |
| 3jb8A00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 43.0 | 3.41e-01 | 100.0% | 87.6% |
| 2je8B05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 40.0 | 3.97e-01 | 100.0% | 83.1% |
| 4b43A03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.50 | 43.0 | 3.87e-01 | 98.8% | 72.2% |
| 3u83A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 42.0 | 4.01e-01 | 98.8% | 86.1% |
ECOD (47)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5081149 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.74 | 60.0 | 6.35e-01 | 98.8% | 100.0% |
| 4434412 | 1.1.7.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ala_racemase_C | 0.65 | 57.0 | 4.73e-01 | 98.8% | 85.4% |
| 2491354 | 4182.1.1.3 ↗ | beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like › Gp53-like_C | 0.65 | 52.0 | 4.97e-01 | 100.0% | 75.0% |
| 5042048 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.64 | 49.0 | 3.72e-01 | 100.0% | 32.8% |
| 4014768 | 1.1.7.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 | 0.64 | 56.0 | 5.12e-01 | 97.5% | 97.1% |
| 4033813 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.63 | 54.0 | 4.98e-01 | 96.2% | 77.1% |
| 4173804 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.61 | 51.0 | 5.01e-01 | 96.2% | 97.8% |
| 3976202 | 304.139.1.4 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › Cas_CT1975 | 0.60 | 42.0 | 2.84e-01 | 75.0% | 75.4% |
| 4004318 | 4182.1.1.3 ↗ | beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like › Gp53-like_C | 0.60 | 49.0 | 4.40e-01 | 98.8% | 62.5% |
| 3973898 | 1.1.7.89 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF26002 | 0.60 | 51.0 | 4.31e-01 | 100.0% | 77.9% |
| 3598458 | 11.1.1.944 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7498 | 0.59 | 49.0 | 4.64e-01 | 92.5% | 82.1% |
| 3942563 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.59 | 52.0 | 4.82e-01 | 98.8% | 99.0% |
| 3931537 | 11.1.1.233 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_mannosidase | 0.58 | 50.0 | 4.82e-01 | 96.2% | 92.2% |
| 3601218 | 11.1.1.944 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7498 | 0.58 | 49.0 | 4.47e-01 | 100.0% | 78.3% |
| 5053995 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.58 | 41.0 | 4.24e-01 | 100.0% | 81.3% |
| 3287262 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.57 | 48.0 | 4.48e-01 | 100.0% | 91.4% |
| 4969607 | 11.1.5.49 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › bMG10 | 0.57 | 45.0 | 4.02e-01 | 97.5% | 59.2% |
| 3172077 | 10.32.1.238 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF29980 | 0.56 | 48.0 | 4.07e-01 | 100.0% | 80.7% |
| 3274941 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 46.0 | 4.59e-01 | 96.2% | 88.2% |
| 5019463 | 12.3.1.74 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › GDE_N | 0.56 | 45.0 | 3.22e-01 | 91.3% | 72.8% |
| 5025974 | 12.3.1.74 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › GDE_N | 0.56 | 44.0 | 3.32e-01 | 90.0% | 80.0% |
| 3211247 | 11.1.1.233 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_mannosidase | 0.56 | 45.0 | 4.51e-01 | 100.0% | 88.2% |
| 3990202 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 44.0 | 4.07e-01 | 90.0% | 80.9% |
| 3701660 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 44.0 | 4.15e-01 | 93.8% | 72.0% |
| 5056552 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.55 | 40.0 | 3.37e-01 | 97.5% | 42.8% |
| 3594492 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.55 | 45.0 | 4.23e-01 | 95.0% | 82.9% |
| 5036401 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 46.0 | 4.46e-01 | 100.0% | 82.1% |
| 3264438 | 12.3.1.46 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › ComC_SSD | 0.55 | 48.0 | 3.43e-01 | 100.0% | 85.9% |
| 3483799 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.54 | 45.0 | 4.09e-01 | 96.2% | 76.5% |
| 3894014 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.54 | 46.0 | 3.78e-01 | 98.8% | 85.4% |
| 1421337 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.54 | 45.0 | 4.28e-01 | 95.0% | 90.6% |
| 1806777 | 12.1.1.53 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Alpha-amylase_C_2 | 0.54 | 39.0 | 3.91e-01 | 100.0% | 74.1% |
| 4001048 | 11.1.1.233 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_mannosidase | 0.54 | 45.0 | 4.41e-01 | 100.0% | 86.7% |
| 4373740 | 11.1.5.47 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › CssAB | 0.54 | 45.0 | 4.07e-01 | 98.8% | 98.3% |
| 3180216 | 11.1.1.233 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_mannosidase | 0.53 | 45.0 | 4.44e-01 | 100.0% | 90.9% |
| 3627277 | 11.1.1.233 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_mannosidase | 0.53 | 44.0 | 4.30e-01 | 100.0% | 85.6% |
| 5035411 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.53 | 45.0 | 4.09e-01 | 100.0% | 81.7% |
| 3254694 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 42.0 | 4.15e-01 | 93.8% | 84.7% |
| 2430480 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.52 | 45.0 | 3.88e-01 | 98.8% | 77.3% |
| 3849067 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 44.0 | 4.07e-01 | 98.8% | 85.5% |
| 4942398 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 44.0 | 3.99e-01 | 98.8% | 85.2% |
| 2144351 | 109.4.1.1136 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HAT_PRP39_N | 0.51 | 43.0 | 3.55e-01 | 100.0% | 49.7% |
| 4360808 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.51 | 43.0 | 4.00e-01 | 100.0% | 73.8% |
| 1560746 | 3233.1.1.0 ↗ | beta sandwiches › Ig-like domain in putative lipoprotein BF3042-related proteins › Ig-like domain in putative lipoprotein BF3042-related proteins › Ig-like domain in putative lipoprotein BF3042-related proteins | 0.51 | 42.0 | 3.49e-01 | 93.8% | 72.7% |
| 4025699 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.51 | 40.0 | 2.88e-01 | 86.3% | 29.0% |
| 3907806 | 11.1.1.108 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 | 0.51 | 43.0 | 3.89e-01 | 98.8% | 80.9% |
| 3704171 | 11.1.1.819 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PTHB1_GAE | 0.51 | 43.0 | 3.92e-01 | 98.8% | 81.7% |
D2
medium
residues 14-72
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4d10F01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.68 | 58.0 | 4.21e-01 | 100.0% | 65.4% |
| 2i00A03 | 3.30.1050.10 | Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain | 0.58 | 40.0 | 3.53e-01 | 74.6% | 47.4% |
| 1xi7A00 | 4.10.40.20 | Few Secondary Structures › Irregular › Omega-AgatoxinV › | 0.56 | 38.0 | 4.11e-01 | 71.2% | 93.6% |
| 2k4rA00 | 2.40.20.10 | Mainly Beta › Beta Barrel › Plasminogen Kringle 4 › Plasminogen Kringle 4 | 0.55 | 36.0 | 3.30e-01 | 76.3% | 50.6% |
| 1ujcA00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.54 | 44.0 | 3.43e-01 | 100.0% | 60.9% |
| 1r77A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.53 | 45.0 | 3.80e-01 | 94.9% | 81.8% |
| 1ym5A02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.52 | 43.0 | 3.32e-01 | 100.0% | 51.9% |
| 3vhxF00 | 2.60.40.4330 | Mainly Beta › Sandwich › Immunoglobulin-like › Kinesin-like protein Kif23, Arf6-interacting domain | 0.52 | 44.0 | 3.77e-01 | 100.0% | 71.6% |
| 3ednA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.52 | 44.0 | 3.50e-01 | 100.0% | 51.5% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4941086 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.68 | 49.0 | 4.08e-01 | 78.0% | 85.2% |
| 3594802 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.68 | 58.0 | 4.20e-01 | 100.0% | 69.4% |
| 3713172 | 2492.1.1.2 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB | 0.66 | 58.0 | 4.05e-01 | 100.0% | 65.1% |
| 4980674 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.62 | 43.0 | 3.63e-01 | 74.6% | 46.4% |
| 4949742 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.59 | 42.0 | 3.33e-01 | 76.3% | 41.5% |
| 3717775 | 209.1.1.0 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like | 0.58 | 46.0 | 3.53e-01 | 94.9% | 74.4% |
| 5041727 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.58 | 48.0 | 3.64e-01 | 100.0% | 80.6% |
| 3716323 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 39.0 | 3.05e-01 | 71.2% | 64.6% |
| 5038529 | 284.4.1.0 ↗ | a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain | 0.57 | 40.0 | 3.88e-01 | 76.3% | 67.7% |
| 3300984 | 2003.1.3.29 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO, Pyr_redox_2 | 0.56 | 45.0 | 2.79e-01 | 89.8% | 54.7% |
| 4855495 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.55 | 39.0 | 3.13e-01 | 76.3% | 60.5% |
| 4009140 | 207.2.1.90 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › AIDA, AC_1 | 0.55 | 41.0 | 2.36e-01 | 81.4% | 9.4% |
| 3980189 | 7525.1.1.1 ↗ | a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_1 | 0.54 | 44.0 | 3.44e-01 | 100.0% | 61.3% |
| 5032977 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 35.0 | 3.24e-01 | 74.6% | 48.8% |
| 4930437 | 220.1.1.219 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch | 0.54 | 37.0 | 3.12e-01 | 71.2% | 81.9% |
| 4377781 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.54 | 38.0 | 3.54e-01 | 78.0% | 67.5% |
| 3701345 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 34.0 | 3.19e-01 | 71.2% | 77.5% |
| 2833318 | 207.2.1.74 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › AC_1 | 0.51 | 40.0 | 3.34e-01 | 89.8% | 92.9% |
| 5053329 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.51 | 35.0 | 2.89e-01 | 74.6% | 53.3% |
| 3199753 | 2002.1.1.33 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_20 | 0.51 | 44.0 | 2.59e-01 | 100.0% | 20.4% |
| 3260957 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.51 | 43.0 | 3.41e-01 | 100.0% | 49.2% |
| 3968097 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.50 | 35.0 | 3.05e-01 | 78.0% | 65.5% |
| 3935989 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.50 | 40.0 | 2.56e-01 | 94.9% | 55.8% |
| 4991926 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.50 | 35.0 | 2.39e-01 | 76.3% | 81.9% |
| 3959531 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 35.0 | 3.37e-01 | 76.3% | 62.9% |