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IMGVR_UViG_3300014039_000036-3300014039-Ga0116646_100011759
Arc-VirIMGVR_UViG_3300014039_000036-3300014039-Ga0116646_100011759
Identity
- Kingdom:
- archaea
Quality
59.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-94
D2
high
residues 492-571
Domain cluster:
representative
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2mlgA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 52.0 | 5.37e-01 | 98.8% | 84.4% |
| 5f7qC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 53.0 | 5.64e-01 | 100.0% | 95.7% |
| 4kt5C00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 53.0 | 5.17e-01 | 100.0% | 77.3% |
| 2fbhA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 48.0 | 4.08e-01 | 100.0% | 45.3% |
| 5dymA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 53.0 | 5.00e-01 | 100.0% | 71.9% |
| 3e1sA01 | 1.10.10.2220 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.65 | 54.0 | 5.15e-01 | 100.0% | 76.8% |
| 6abqB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 52.0 | 4.81e-01 | 100.0% | 67.0% |
| 2dqlA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 55.0 | 4.86e-01 | 100.0% | 64.3% |
| 6kf9G01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 47.0 | 4.75e-01 | 100.0% | 78.0% |
| 7xc2A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 54.0 | 4.92e-01 | 100.0% | 71.7% |
| 5h20A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 50.0 | 4.64e-01 | 100.0% | 68.0% |
| 3rsnA00 | 3.90.980.20 | Alpha Beta › Alpha-Beta Complex › DNA primase DNAg catalytic core, N-terminal domain › | 0.62 | 55.0 | 4.34e-01 | 100.0% | 56.4% |
| 3cuqA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 51.0 | 5.11e-01 | 100.0% | 91.4% |
| 1fpqA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 51.0 | 4.39e-01 | 100.0% | 58.1% |
| 7jgsG02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 51.0 | 4.83e-01 | 100.0% | 77.6% |
| 4esjA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 45.0 | 4.41e-01 | 100.0% | 74.4% |
| 2ch0A01 | 1.10.10.1180 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MAN1, winged-helix domain | 0.57 | 49.0 | 4.68e-01 | 100.0% | 81.6% |
| 1z21A00 | 1.10.10.1000 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Type III secretion system virulence factor YopR, core domain | 0.56 | 42.0 | 4.06e-01 | 96.2% | 68.8% |
| 2hnkA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 45.0 | 3.29e-01 | 98.8% | 31.0% |
| 1bm9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 47.0 | 4.19e-01 | 100.0% | 64.2% |
| 1xb4B01 | 1.10.10.570 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › """Winged helix"" DNA-binding domain. Chain C. Domain 1" | 0.56 | 48.0 | 4.42e-01 | 100.0% | 75.0% |
| 2pi0A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 46.0 | 4.40e-01 | 96.2% | 97.9% |
| 2o61A03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 46.0 | 4.25e-01 | 96.2% | 99.1% |
| 4p55B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 45.0 | 4.36e-01 | 96.2% | 97.9% |
| 3keyA02 | 3.30.1370.230 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Stn1, C-terminal wHTH domain | 0.54 | 46.0 | 4.47e-01 | 100.0% | 87.5% |
| 2m71A00 | 3.30.110.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Translation initiation factor 3 (IF-3), C-terminal domain | 0.54 | 43.0 | 4.06e-01 | 100.0% | 72.4% |
| 3gkuA03 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.53 | 38.0 | 4.03e-01 | 100.0% | 87.3% |
| 3duwA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 46.0 | 3.36e-01 | 98.8% | 35.2% |
| 3d0cB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.53 | 42.0 | 2.96e-01 | 92.5% | 54.0% |
| 1suiA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 46.0 | 3.32e-01 | 97.5% | 34.4% |
| 3mtiB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 44.0 | 3.39e-01 | 100.0% | 41.1% |
| 1sw2A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.52 | 39.0 | 3.21e-01 | 83.7% | 42.8% |
| 4ne4A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.52 | 39.0 | 3.17e-01 | 83.7% | 42.5% |
| 5hvqC01 | 3.90.1150.220 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.51 | 42.0 | 4.26e-01 | 100.0% | 95.0% |
| 2kpmA01 | 3.30.420.610 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like | 0.51 | 42.0 | 4.33e-01 | 92.5% | 98.7% |
| 1mc0A01 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.51 | 43.0 | 3.54e-01 | 98.8% | 99.4% |
| 1tigA00 | 3.30.110.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Translation initiation factor 3 (IF-3), C-terminal domain | 0.51 | 40.0 | 3.95e-01 | 100.0% | 81.8% |
| 1hw7A01 | 3.55.30.10 | Alpha Beta › 3-Layer(bab) Sandwich › Hsp33 domain › Hsp33 domain | 0.50 | 35.0 | 2.86e-01 | 76.2% | 93.6% |
| 1ro5A01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.50 | 42.0 | 3.30e-01 | 97.5% | 93.6% |
ECOD (72)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3275982 | 101.1.2.312 ↗ | alpha arrays › HTH › HTH › winged helix domain › MSC | 0.75 | 63.0 | 4.66e-01 | 100.0% | 35.6% |
| 3228509 | 101.1.4.12 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › MSC | 0.71 | 61.0 | 5.14e-01 | 100.0% | 56.3% |
| 3792911 | 101.1.2.312 ↗ | alpha arrays › HTH › HTH › winged helix domain › MSC | 0.71 | 61.0 | 5.45e-01 | 100.0% | 67.0% |
| 5022036 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 53.0 | 4.39e-01 | 100.0% | 47.4% |
| 5077205 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 58.0 | 5.46e-01 | 96.2% | 76.8% |
| 4097415 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.69 | 54.0 | 5.70e-01 | 100.0% | 95.7% |
| 3726854 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 51.0 | 4.72e-01 | 100.0% | 63.0% |
| 3945466 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 54.0 | 5.01e-01 | 100.0% | 68.0% |
| 3735293 | 101.1.2.312 ↗ | alpha arrays › HTH › HTH › winged helix domain › MSC | 0.68 | 61.0 | 4.25e-01 | 100.0% | 31.5% |
| 3542800 | 101.1.2.312 ↗ | alpha arrays › HTH › HTH › winged helix domain › MSC | 0.68 | 61.0 | 4.26e-01 | 100.0% | 31.4% |
| 1107232 | 101.1.2.84 ↗ | alpha arrays › HTH › HTH › winged helix domain › CaiF_GrlA | 0.68 | 53.0 | 5.17e-01 | 100.0% | 77.3% |
| 3820802 | 101.1.2.529 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7599 | 0.67 | 58.0 | 5.20e-01 | 100.0% | 69.1% |
| 3843442 | 101.1.2.312 ↗ | alpha arrays › HTH › HTH › winged helix domain › MSC | 0.67 | 59.0 | 5.13e-01 | 100.0% | 64.0% |
| 4606139 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 54.0 | 5.41e-01 | 100.0% | 88.7% |
| 3373659 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.66 | 56.0 | 5.09e-01 | 100.0% | 70.5% |
| 4944171 | 101.1.2.57 ↗ | alpha arrays › HTH › HTH › winged helix domain › EAP30 | 0.66 | 55.0 | 4.54e-01 | 100.0% | 52.1% |
| 4998663 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 54.0 | 4.61e-01 | 96.2% | 55.4% |
| 3176995 | 101.1.2.127 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 | 0.65 | 52.0 | 5.15e-01 | 100.0% | 82.1% |
| 3281274 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.65 | 50.0 | 5.09e-01 | 100.0% | 85.0% |
| 3202241 | 101.1.2.77 ↗ | alpha arrays › HTH › HTH › winged helix domain › ESCRT-II | 0.64 | 51.0 | 4.81e-01 | 100.0% | 70.0% |
| 3700540 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 54.0 | 5.40e-01 | 100.0% | 92.5% |
| 5061948 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.64 | 52.0 | 4.29e-01 | 100.0% | 49.3% |
| None | — | 0.64 | 53.0 | 5.12e-01 | 100.0% | 82.2% | |
| 3744213 | 101.1.2.57 ↗ | alpha arrays › HTH › HTH › winged helix domain › EAP30 | 0.63 | 52.0 | 4.35e-01 | 100.0% | 51.4% |
| 3618436 | 101.1.2.77 ↗ | alpha arrays › HTH › HTH › winged helix domain › ESCRT-II | 0.63 | 52.0 | 5.38e-01 | 100.0% | 96.0% |
| 5073785 | 101.1.2.57 ↗ | alpha arrays › HTH › HTH › winged helix domain › EAP30 | 0.63 | 52.0 | 4.77e-01 | 100.0% | 69.5% |
| 3958859 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 49.0 | 4.96e-01 | 100.0% | 85.0% |
| 4625648 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.63 | 52.0 | 4.73e-01 | 100.0% | 67.0% |
| 3587826 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.63 | 53.0 | 4.75e-01 | 100.0% | 67.6% |
| 5065027 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.62 | 49.0 | 4.08e-01 | 100.0% | 47.6% |
| 3701996 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 50.0 | 5.15e-01 | 97.5% | 94.7% |
| 5049009 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 49.0 | 3.93e-01 | 100.0% | 41.8% |
| 422747 | 101.1.2.186 ↗ | alpha arrays › HTH › HTH › winged helix domain › ASH2L-like_WH | 0.62 | 55.0 | 5.01e-01 | 100.0% | 87.7% |
| 4588402 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 50.0 | 5.18e-01 | 100.0% | 96.0% |
| 3602364 | 101.1.15.0 ↗ | alpha arrays › HTH › HTH › HAT1, C-terminal domain | 0.62 | 50.0 | 4.88e-01 | 100.0% | 80.0% |
| 5005062 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.62 | 48.0 | 2.93e-01 | 100.0% | 13.1% |
| 3267490 | 101.1.2.24 ↗ | alpha arrays › HTH › HTH › winged helix domain › MAGE | 0.61 | 51.0 | 3.70e-01 | 100.0% | 32.3% |
| 4487383 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.61 | 53.0 | 4.83e-01 | 100.0% | 74.5% |
| 3280086 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.61 | 49.0 | 3.74e-01 | 100.0% | 38.9% |
| 3744355 | 101.1.2.148 ↗ | alpha arrays › HTH › HTH › winged helix domain › ORC5_C | 0.61 | 54.0 | 4.66e-01 | 100.0% | 76.0% |
| 4959599 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.61 | 51.0 | 4.58e-01 | 100.0% | 65.8% |
| 4961270 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.60 | 53.0 | 4.92e-01 | 100.0% | 76.2% |
| 5005164 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.60 | 52.0 | 4.72e-01 | 100.0% | 71.3% |
| 4971711 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 53.0 | 4.62e-01 | 100.0% | 64.0% |
| 3168799 | 101.1.2.148 ↗ | alpha arrays › HTH › HTH › winged helix domain › ORC5_C | 0.60 | 53.0 | 4.24e-01 | 100.0% | 77.0% |
| 3481547 | 101.1.2.68 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 | 0.60 | 53.0 | 4.35e-01 | 100.0% | 60.0% |
| 5049515 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.60 | 52.0 | 4.66e-01 | 100.0% | 68.7% |
| 5003874 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.60 | 52.0 | 4.62e-01 | 100.0% | 66.7% |
| 5035685 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.59 | 50.0 | 4.36e-01 | 100.0% | 60.5% |
| 4025929 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 51.0 | 4.62e-01 | 100.0% | 73.0% |
| 4930596 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.59 | 47.0 | 3.71e-01 | 100.0% | 40.6% |
| 3770447 | 101.1.2.606 ↗ | alpha arrays › HTH › HTH › winged helix domain › RPC5_C | 0.59 | 52.0 | 5.06e-01 | 100.0% | 87.8% |
| 3788427 | 101.1.2.207 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFC3_eWH | 0.59 | 49.0 | 4.62e-01 | 100.0% | 75.0% |
| 3281879 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.59 | 47.0 | 3.70e-01 | 100.0% | 40.0% |
| 3836863 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.59 | 51.0 | 4.14e-01 | 100.0% | 51.3% |
| 4022514 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 51.0 | 4.61e-01 | 100.0% | 71.8% |
| 3895552 | 101.1.2.4 ↗ | alpha arrays › HTH › HTH › winged helix domain › Forkhead | 0.58 | 51.0 | 4.37e-01 | 100.0% | 60.8% |
| 4961841 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.58 | 51.0 | 4.37e-01 | 100.0% | 63.1% |
| 5050129 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.58 | 51.0 | 4.63e-01 | 100.0% | 73.6% |
| 4117256 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.58 | 50.0 | 4.35e-01 | 100.0% | 61.5% |
| 3590646 | 101.1.2.16 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rep3_N | 0.57 | 49.0 | 4.33e-01 | 100.0% | 73.6% |
| 3588764 | 101.1.2.16 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rep3_N | 0.57 | 51.0 | 4.45e-01 | 100.0% | 73.3% |
| 4976186 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.57 | 51.0 | 4.09e-01 | 100.0% | 56.1% |
| 3781990 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 46.0 | 4.57e-01 | 100.0% | 87.1% |
| 4620040 | 101.1.2.187 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rep3_C | 0.55 | 47.0 | 4.35e-01 | 100.0% | 78.1% |
| 3204194 | 101.1.2.86 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_Nse1 | 0.54 | 47.0 | 4.54e-01 | 100.0% | 84.2% |
| 5021779 | 7523.1.1.17 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › OpuAC | 0.53 | 41.0 | 3.23e-01 | 83.7% | 41.7% |
| None | — | 0.52 | 41.0 | 3.15e-01 | 92.5% | 68.3% | |
| 4024283 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.52 | 38.0 | 3.91e-01 | 91.3% | 82.7% |
| 3025907 | 2003.1.5.14 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_3 | 0.51 | 45.0 | 3.23e-01 | 98.8% | 33.8% |
| 5026620 | 3651.1.1.1 ↗ | alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B | 0.51 | 40.0 | 3.57e-01 | 90.0% | 74.6% |
| 3931558 | 207.1.1.156 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › PF27094 | 0.51 | 40.0 | 2.52e-01 | 88.7% | 28.4% |
D3
medium
residues 153-241
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1mhxA00 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.58 | 31.0 | 3.58e-01 | 92.1% | 70.8% |
| 3enpA00 | 3.30.2380.10 | Alpha Beta › 2-Layer Sandwich › PF0523-like › CGI121/TPRKB | 0.56 | 39.0 | 3.19e-01 | 73.0% | 67.3% |
| 3nnfA00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.56 | 45.0 | 3.10e-01 | 87.6% | 76.4% |
| 4u2xF00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.55 | 40.0 | 3.33e-01 | 78.7% | 60.0% |
| 3dt5A00 | 1.10.3940.10 | Mainly Alpha › Orthogonal Bundle › AF_0924 fold › AF_0924 domain | 0.52 | 40.0 | 3.65e-01 | 82.0% | 93.3% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4934385 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.55 | 36.0 | 2.78e-01 | 76.4% | 31.6% |
| 3869545 | 220.1.1.125 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_PLEKHM2 | 0.52 | 38.0 | 3.27e-01 | 76.4% | 82.9% |
| 2069009 | 304.107.1.1 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › GCV_T | 0.52 | 40.0 | 3.49e-01 | 84.3% | 61.0% |
D4
medium
residues 309-488
Domain cluster:
rep: MN062720.1__QDP45567.1__SEA_FUZZBUSTER_83__00083__D568-722_747-764
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05272.18 best | VapE-like_dom | 141.4 | 4.10e-41 | 99.4% | 74.7% |