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IMGVR_UViG_3300014039_000069-3300014039-Ga0116646_100048225
Arc-VirIMGVR_UViG_3300014039_000069-3300014039-Ga0116646_100048225
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-152
Domain cluster:
rep: NC_042001.1__YP_009610157.1__FDI28_gp81__00029__D22-140
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4bbyA05 | 3.30.300.330 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.71 | 42.0 | 4.67e-01 | 91.3% | 74.1% |
| 4dg8A02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.66 | 33.0 | 3.88e-01 | 85.5% | 67.4% |
| 3qktD01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 43.0 | 3.22e-01 | 92.0% | 28.3% |
| 3kxwA02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.61 | 36.0 | 3.76e-01 | 90.6% | 62.9% |
| 2v4jB03 | 3.30.70.20 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 26.0 | 3.44e-01 | 77.5% | 80.0% |
| 2qlzA02 | 6.10.250.2960 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.57 | 26.0 | 3.13e-01 | 87.7% | 62.8% |
| 1regX00 | 3.30.70.650 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Translation repressor RegA | 0.56 | 33.0 | 3.53e-01 | 81.9% | 64.8% |
| 3ue3A01 | 3.90.1310.10 | Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) | 0.53 | 33.0 | 3.79e-01 | 94.9% | 86.6% |
| 2db2A01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 24.0 | 2.91e-01 | 79.0% | 64.9% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5047612 | 3501.1.1.1 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 | 0.76 | 37.0 | 4.96e-01 | 94.9% | 86.7% |
| 4954522 | 878.1.1.1 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 | 0.69 | 45.0 | 5.26e-01 | 98.6% | 95.7% |
| 5050894 | 1075.3.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC importer transmembrane domain fold › Type I ABC importer transmembrane domain fold › BPD_transp_1 | 0.67 | 42.0 | 3.45e-01 | 100.0% | 35.8% |
| 4991990 | 878.1.1.0 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 | 0.67 | 40.0 | 4.65e-01 | 93.5% | 83.0% |
| 4385049 | 304.39.1.1 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd | 0.65 | 35.0 | 4.00e-01 | 100.0% | 69.5% |
| 3209689 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.59 | 25.0 | 2.92e-01 | 71.7% | 51.6% |
| 3526003 | 304.9.1.87 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF30891 | 0.59 | 39.0 | 4.20e-01 | 90.6% | 79.1% |
| 3674227 | 11.1.5.7 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adap_comp_sub | 0.56 | 24.0 | 2.61e-01 | 72.5% | 45.2% |
| 3588223 | 304.156.1.0 ↗ | a+b two layers › Alpha-beta plaits › DNA translocase FtsK N-terminal domain › DNA translocase FtsK N-terminal domain | 0.54 | 31.0 | 3.67e-01 | 81.9% | 84.4% |
| 4962207 | 223.11.1.1 ↗ | a+b three layers › Profilin-like › N-terminal domain of Apc beta-subunit › N-terminal domain of Apc beta-subunit › Hydantoinase_B | 0.54 | 49.0 | 4.18e-01 | 99.3% | 95.0% |
| None | — | 0.54 | 43.0 | 3.25e-01 | 92.0% | 36.3% | |
| 4444422 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.53 | 25.0 | 2.68e-01 | 99.3% | 51.2% |
| 5072187 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.52 | 40.0 | 2.85e-01 | 93.5% | 25.6% |