←Back to structures
IMGVR_UViG_3300014040_000006-3300014040-Ga0117811_100027521
Arc-VirIMGVR_UViG_3300014040_000006-3300014040-Ga0117811_100027521
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 58-134
Domain cluster:
rep: IMGVR_UViG_3300006674_000016-3300006674-Ga0101770_100108614__D54-119
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zp2A02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.78 | 71.0 | 6.25e-01 | 100.0% | 75.0% |
| 1zp2A01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.78 | 68.0 | 5.96e-01 | 100.0% | 64.3% |
| 2w9zA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.77 | 69.0 | 5.73e-01 | 100.0% | 63.2% |
| 1c9bA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.77 | 67.0 | 6.19e-01 | 98.7% | 76.3% |
| 4bbrM00 | 1.10.472.170 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › | 0.76 | 65.0 | 4.82e-01 | 96.1% | 37.3% |
| 1aisB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.76 | 65.0 | 6.08e-01 | 97.4% | 77.7% |
| 1aisB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.75 | 64.0 | 5.91e-01 | 97.4% | 73.7% |
| 5xs2B02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.74 | 66.0 | 5.53e-01 | 100.0% | 69.7% |
| 2ivxB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.74 | 67.0 | 5.44e-01 | 100.0% | 66.4% |
| 1c9bA02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.73 | 64.0 | 5.77e-01 | 100.0% | 70.8% |
| 7jv7B01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.73 | 66.0 | 5.34e-01 | 100.0% | 65.1% |
| 2i53A01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.73 | 66.0 | 5.36e-01 | 100.0% | 61.5% |
| 1f5qB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.73 | 65.0 | 5.35e-01 | 100.0% | 56.5% |
| 6z4xA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.71 | 63.0 | 4.99e-01 | 100.0% | 49.0% |
| 3h4cA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.70 | 59.0 | 5.53e-01 | 93.5% | 79.2% |
| 1jkwA02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.70 | 60.0 | 5.57e-01 | 98.7% | 77.2% |
| 4krdB00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.68 | 60.0 | 4.52e-01 | 100.0% | 45.3% |
| 1ic8A02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.64 | 43.0 | 4.44e-01 | 70.1% | 98.6% |
| 2a2fX01 | 1.10.357.30 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Exocyst complex subunit Sec15 C-terminal domain, N-terminal subdomain | 0.64 | 43.0 | 3.39e-01 | 70.1% | 62.9% |
| 2fq3A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 49.0 | 4.76e-01 | 87.0% | 90.6% |
| 3r2cA00 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.61 | 53.0 | 4.49e-01 | 100.0% | 66.7% |
| 2pjqA01 | 1.10.472.50 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like | 0.61 | 50.0 | 4.85e-01 | 92.2% | 80.9% |
| 2k9lA00 | 1.10.10.1330 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RNA polymerase sigma-54 factor, core-binding domain | 0.61 | 48.0 | 4.86e-01 | 94.8% | 89.5% |
| 1gxyA00 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.59 | 48.0 | 3.60e-01 | 94.8% | 65.9% |
| 1mc0A01 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.58 | 45.0 | 3.62e-01 | 85.7% | 86.1% |
| 3nrgA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.57 | 40.0 | 3.02e-01 | 75.3% | 30.9% |
| 1vw4801 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.56 | 37.0 | 3.80e-01 | 72.7% | 71.2% |
| 7ccmB01 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.56 | 38.0 | 3.14e-01 | 100.0% | 37.8% |
| 3mvcB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.56 | 45.0 | 3.70e-01 | 92.2% | 68.2% |
| 3hlzA02 | 1.20.120.1090 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.55 | 38.0 | 3.21e-01 | 70.1% | 54.3% |
| 1wolA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.54 | 44.0 | 3.79e-01 | 98.7% | 55.7% |
| 2vm6A00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.53 | 37.0 | 3.03e-01 | 72.7% | 53.5% |
| 3gonA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.53 | 38.0 | 3.18e-01 | 76.6% | 66.4% |
| 7ys6A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.51 | 45.0 | 3.13e-01 | 100.0% | 32.6% |
| 4z7xB00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.50 | 40.0 | 3.09e-01 | 93.5% | 60.6% |
| 1ylmA00 | 1.20.120.580 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › bsu32300-like | 0.50 | 41.0 | 3.44e-01 | 93.5% | 69.7% |
ECOD (62)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3824693 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.82 | 74.0 | 5.09e-01 | 98.7% | 31.0% |
| 3598087 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.81 | 75.0 | 6.37e-01 | 100.0% | 66.7% |
| 3909404 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.80 | 73.0 | 6.56e-01 | 100.0% | 77.1% |
| 3906253 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.79 | 71.0 | 6.10e-01 | 100.0% | 68.3% |
| 3566449 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.79 | 71.0 | 6.40e-01 | 100.0% | 81.0% |
| 4567417 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.78 | 71.0 | 6.20e-01 | 100.0% | 67.0% |
| 3828317 | 101.1.10.18 ↗ | alpha arrays › HTH › HTH › Cyclin-like › BRF2-like_C_cyclin_rpt | 0.78 | 69.0 | 5.54e-01 | 100.0% | 50.0% |
| 3339942 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.78 | 70.0 | 5.80e-01 | 100.0% | 59.3% |
| 3311534 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.78 | 70.0 | 5.78e-01 | 100.0% | 60.0% |
| 3679788 | 101.1.20.5 ↗ | alpha arrays › HTH › HTH › Sigma54 core-binding domain › TFIIB | 0.78 | 70.0 | 5.27e-01 | 100.0% | 42.2% |
| 3345767 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.78 | 70.0 | 5.93e-01 | 100.0% | 68.0% |
| 4927466 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.77 | 68.0 | 6.47e-01 | 100.0% | 83.3% |
| 3668562 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.77 | 69.0 | 5.36e-01 | 100.0% | 46.1% |
| 5001161 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.77 | 68.0 | 5.94e-01 | 97.4% | 67.8% |
| 3222400 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.77 | 67.0 | 6.43e-01 | 97.4% | 86.7% |
| 5042605 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.77 | 67.0 | 6.32e-01 | 98.7% | 79.6% |
| 4999627 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.77 | 66.0 | 5.45e-01 | 97.4% | 54.1% |
| 4025852 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.77 | 66.0 | 5.61e-01 | 94.8% | 64.8% |
| 4947168 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.77 | 65.0 | 6.22e-01 | 96.1% | 80.0% |
| 5067099 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.76 | 67.0 | 5.57e-01 | 97.4% | 60.0% |
| 3367300 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.76 | 68.0 | 5.35e-01 | 100.0% | 49.4% |
| 3445041 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.76 | 67.0 | 5.58e-01 | 100.0% | 59.3% |
| 4947863 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.76 | 65.0 | 6.20e-01 | 97.4% | 81.1% |
| 4550536 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.76 | 65.0 | 6.18e-01 | 97.4% | 81.1% |
| 3743165 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.76 | 66.0 | 5.65e-01 | 97.4% | 69.6% |
| 3434992 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.76 | 67.0 | 6.25e-01 | 98.7% | 80.0% |
| 3272263 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.75 | 66.0 | 5.77e-01 | 100.0% | 66.7% |
| 4927465 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.75 | 68.0 | 5.14e-01 | 100.0% | 45.0% |
| 4945282 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.75 | 66.0 | 5.76e-01 | 98.7% | 64.9% |
| 5025138 | 101.1.10.80 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Zn_Ribbon_TF | 0.75 | 65.0 | 4.75e-01 | 97.4% | 36.5% |
| 4999090 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.75 | 66.0 | 5.53e-01 | 97.4% | 60.8% |
| 4978149 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.75 | 64.0 | 5.99e-01 | 97.4% | 76.8% |
| 4944102 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.75 | 65.0 | 6.22e-01 | 98.7% | 82.2% |
| 4929479 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.75 | 63.0 | 6.01e-01 | 92.2% | 80.0% |
| 5042604 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.75 | 66.0 | 5.27e-01 | 98.7% | 49.0% |
| 3262956 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.75 | 66.0 | 5.51e-01 | 100.0% | 57.1% |
| 4982983 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.75 | 64.0 | 5.97e-01 | 97.4% | 76.8% |
| 4273747 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.75 | 66.0 | 5.25e-01 | 97.4% | 52.0% |
| 3724015 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.74 | 67.0 | 5.48e-01 | 100.0% | 55.0% |
| 5053358 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.74 | 65.0 | 5.52e-01 | 97.4% | 60.0% |
| 5053417 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.74 | 64.0 | 5.16e-01 | 98.7% | 49.3% |
| 4956629 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.74 | 65.0 | 5.75e-01 | 100.0% | 68.2% |
| 5051285 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.74 | 65.0 | 5.09e-01 | 100.0% | 46.1% |
| 3639001 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.74 | 66.0 | 5.41e-01 | 100.0% | 63.6% |
| 4927193 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.73 | 64.0 | 5.79e-01 | 97.4% | 71.4% |
| 4969272 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.73 | 64.0 | 5.53e-01 | 97.4% | 65.8% |
| 2840 | 101.1.10.16 ↗ | alpha arrays › HTH › HTH › Cyclin-like › V-cyclin_C | 0.73 | 65.0 | 5.84e-01 | 100.0% | 73.6% |
| 5042406 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.73 | 62.0 | 5.84e-01 | 94.8% | 76.8% |
| 3166681 | 101.1.10.22 ↗ | alpha arrays › HTH › HTH › Cyclin-like › ORC6 | 0.72 | 65.0 | 5.85e-01 | 100.0% | 73.3% |
| 3641832 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.72 | 63.0 | 5.97e-01 | 100.0% | 81.1% |
| 3407936 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.72 | 64.0 | 5.45e-01 | 100.0% | 74.4% |
| 5000679 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.70 | 63.0 | 5.58e-01 | 100.0% | 72.7% |
| 3968859 | 4198.1.1.3 ↗ | alpha arrays › TerB-like › TerB-like › TerB-like › DUF533 | 0.70 | 52.0 | 4.16e-01 | 79.2% | 100.0% |
| 4937418 | 4156.1.1.6 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Helicase_dom4_arc | 0.70 | 59.0 | 4.63e-01 | 93.5% | 62.4% |
| 3342271 | 5059.1.1.34 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA, Nuc_sug_transp | 0.69 | 48.0 | 3.16e-01 | 71.4% | 48.5% |
| 4278665 | 140.1.1.11 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_1 | 0.60 | 43.0 | 3.17e-01 | 75.3% | 91.4% |
| 3977072 | 604.39.1.27 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › MASE1 | 0.59 | 42.0 | 3.14e-01 | 75.3% | 45.4% |
| 3666876 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.56 | 42.0 | 3.59e-01 | 80.5% | 71.5% |
| 4927892 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.56 | 38.0 | 2.45e-01 | 70.1% | 94.9% |
| 5028635 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.54 | 37.0 | 3.03e-01 | 70.1% | 80.7% |
| 4941838 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.54 | 44.0 | 3.81e-01 | 93.5% | 71.5% |
| 3258297 | 141.1.1.0 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases | 0.53 | 43.0 | 3.32e-01 | 100.0% | 74.4% |