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IMGVR_UViG_3300014052_000001-3300014052-Ga0120109_100161610

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300014052_000001-3300014052-Ga0120109_100161610 ↗
Kingdom:: archaea

Quality

74.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 16-121

PDB

Domain cluster: representative

CATH (10)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3fewX02	3.30.1310.40	Alpha Beta › 2-Layer Sandwich › Ybab; Chain: A; ›	0.72	27.0	2.85e-01	93.4%	36.8%
6j9eJ00	3.30.160.560	Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain ›	0.66	32.0	3.93e-01	94.3%	72.7%
1y96D00	2.30.30.100	Mainly Beta › Roll › SH3 type barrels. ›	0.65	37.0	4.21e-01	97.2%	73.5%
3d4eA01	3.30.1450.10	Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 ›	0.60	29.0	3.21e-01	88.7%	54.8%
3jb9H00	2.30.30.100	Mainly Beta › Roll › SH3 type barrels. ›	0.59	37.0	4.32e-01	98.1%	88.2%
4qqgG00	2.30.30.140	Mainly Beta › Roll › SH3 type barrels. ›	0.55	33.0	3.90e-01	97.2%	88.9%
4oagB02	3.30.460.90	Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 ›	0.54	38.0	3.16e-01	72.6%	69.9%
3nybA02	3.30.460.10	Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2	0.53	29.0	2.95e-01	78.3%	49.1%
3ffzA04	2.80.10.50	Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) ›	0.52	42.0	3.62e-01	88.7%	92.1%
1lxmA04	2.60.40.1380	Mainly Beta › Sandwich › Immunoglobulin-like › E set domains; domain 4	0.50	29.0	3.42e-01	84.9%	81.6%

ECOD (14)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3281300	4.1.1.426 ↗	beta barrels › SH3 › SH3 › SH3 › PF31188	0.75	44.0	5.46e-01	89.6%	95.4%
2834342	227.1.1.12 ↗	a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9	0.63	35.0	4.30e-01	84.9%	86.8%
5072544	375.1.1.0 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related	0.60	26.0	3.51e-01	85.8%	75.0%
3976197	241.13.1.1 ↗	a+b two layers › Type III secretory system chaperone-like › N-terminal domain of secreted effector protein sifA › N-terminal domain of secreted effector protein sifA › Sif	0.60	33.0	3.29e-01	74.5%	49.6%
1877618	330.15.1.1 ↗	a+b two layers › dsRBD-like › VtrA protein periplasmic domain › VtrA protein periplasmic domain › VtrA_C	0.58	36.0	3.90e-01	97.2%	73.3%
4991564	10.1.1.0 ↗	beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases	0.56	45.0	3.95e-01	97.2%	58.1%
4134591	240.1.1.0 ↗	a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Ribosomal protein TL5/L25 C-terminal domain-related › Ribosomal protein TL5/L25 C-terminal domain-related	0.54	35.0	4.10e-01	100.0%	98.6%
3660053	2004.1.1.19 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras	0.54	44.0	3.51e-01	89.6%	87.3%
3635423	844.1.1.0 ↗	beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain	0.53	42.0	3.45e-01	82.1%	95.7%
3665124	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.52	44.0	3.31e-01	93.4%	84.8%
3173582	207.1.1.0 ↗	beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats	0.52	30.0	2.03e-01	93.4%	17.2%
4963443	5.1.10.0 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed	0.52	36.0	3.82e-01	93.4%	81.1%
5009633	220.1.1.0 ↗	beta barrels › PH domain-like › PH domain-like › PH domain-like	0.51	38.0	4.09e-01	89.6%	93.3%
2504439	7063.1.1.0 ↗	a/b three-layered sandwiches › C-terminal domain of poxin › C-terminal domain of poxin › C-terminal domain of poxin	0.50	35.0	4.07e-01	100.0%	96.2%