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IMGVR_UViG_3300014052_000001-3300014052-Ga0120109_100161611

Arc-Vir

IMGVR_UViG_3300014052_000001-3300014052-Ga0120109_100161611

Quality

75.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-105
PDB
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF14279.13 best HNH_5 29.4 8.60e-07 53.0% 78.6%
PF01844.30 HNH 50.8 2.10e-13 44.0% 97.9%
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1e7lA01 3.40.1800.10 Alpha Beta › 3-Layer(aba) Sandwich › His-Me finger endonuclease fold › His-Me finger endonucleases 0.74 55.0 6.10e-01 78.0% 96.2%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3590055 378.1.1.2 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH 0.81 55.0 5.27e-01 70.0% 89.6%
5080086 378.1.1.0 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.77 56.0 6.27e-01 76.0% 96.2%
4177935 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.63 38.0 3.65e-01 80.0% 53.0%
2462317 4205.1.1.2 a+b two layers › SMI1/KNR4-like › SMI1/KNR4-like › SMI1/KNR4-like › GAD-like,T6SS_Tdi1_C 0.61 46.0 3.59e-01 81.0% 82.4%
4022014 376.1.1.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.56 38.0 3.63e-01 71.0% 65.0%
3229557 3937.1.1.2 alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin 0.54 39.0 2.59e-01 75.0% 95.6%