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IMGVR_UViG_3300014052_000001-3300014052-Ga0120109_100161611
Arc-VirIMGVR_UViG_3300014052_000001-3300014052-Ga0120109_100161611
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-105
Domain cluster:
rep: IMGVR_UViG_3300010332_000127-3300010332-Ga0116200_100039035__D12-102
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF14279.13 best | HNH_5 | 29.4 | 8.60e-07 | 53.0% | 78.6% |
| PF01844.30 | HNH | 50.8 | 2.10e-13 | 44.0% | 97.9% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1e7lA01 | 3.40.1800.10 | Alpha Beta › 3-Layer(aba) Sandwich › His-Me finger endonuclease fold › His-Me finger endonucleases | 0.74 | 55.0 | 6.10e-01 | 78.0% | 96.2% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3590055 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.81 | 55.0 | 5.27e-01 | 70.0% | 89.6% |
| 5080086 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.77 | 56.0 | 6.27e-01 | 76.0% | 96.2% |
| 4177935 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.63 | 38.0 | 3.65e-01 | 80.0% | 53.0% |
| 2462317 | 4205.1.1.2 ↗ | a+b two layers › SMI1/KNR4-like › SMI1/KNR4-like › SMI1/KNR4-like › GAD-like,T6SS_Tdi1_C | 0.61 | 46.0 | 3.59e-01 | 81.0% | 82.4% |
| 4022014 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.56 | 38.0 | 3.63e-01 | 71.0% | 65.0% |
| 3229557 | 3937.1.1.2 ↗ | alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin | 0.54 | 39.0 | 2.59e-01 | 75.0% | 95.6% |