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IMGVR_UViG_3300014153_000164-3300014153-Ga0181527_10145711
Arc-VirIMGVR_UViG_3300014153_000164-3300014153-Ga0181527_10145711
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 93-218
Domain cluster:
rep: IMGVR_UViG_3300025312_000096-3300025312-Ga0209321_1000705221__D239-363
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09967.16 best | DUF2201 | 78.2 | 8.50e-22 | 100.0% | 97.6% |
D2
medium
residues 3-40
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2om6A02 | 1.10.150.400 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.78 | 57.0 | 4.46e-01 | 78.9% | 38.0% |
| 2yf4F00 | 1.10.3420.10 | Mainly Alpha › Orthogonal Bundle › putative ntp pyrophosphohydrolase like fold › putative ntp pyrophosphohydrolase like domain | 0.77 | 60.0 | 4.03e-01 | 86.8% | 38.5% |
| 5lb3B02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.73 | 57.0 | 3.45e-01 | 86.8% | 14.0% |
| 1lvfB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 57.0 | 4.32e-01 | 100.0% | 37.5% |
| 2wyhB04 | 1.20.1270.50 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Glycoside hydrolase family 38, central domain | 0.69 | 51.0 | 3.76e-01 | 86.8% | 30.7% |
| 2e62A01 | 6.10.140.420 | Special › Helix non-globular › Helix Hairpins › | 0.68 | 57.0 | 5.09e-01 | 92.1% | 73.1% |
| 2kwhA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.68 | 56.0 | 5.01e-01 | 97.4% | 66.1% |
| 4okvE00 | 6.10.140.1890 | Special › Helix non-globular › Helix Hairpins › | 0.67 | 56.0 | 4.70e-01 | 97.4% | 55.4% |
| 2ds2D01 | 1.10.110.10 | Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins | 0.67 | 48.0 | 4.19e-01 | 76.3% | 56.1% |
| 4hteA03 | 1.10.167.30 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › | 0.66 | 58.0 | 4.55e-01 | 100.0% | 57.5% |
| 3l1nA01 | 6.10.140.790 | Special › Helix non-globular › Helix Hairpins › | 0.66 | 56.0 | 5.18e-01 | 100.0% | 82.4% |
| 3icxA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.64 | 52.0 | 4.29e-01 | 97.4% | 52.0% |
| 2yevA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.63 | 55.0 | 4.41e-01 | 100.0% | 51.4% |
| 3hsqA02 | 1.20.1180.10 | Mainly Alpha › Up-down Bundle › Udp N-acetylglucosamine O-acyltransferase; Domain 2 › Udp N-acetylglucosamine O-acyltransferase, C-terminal domain | 0.56 | 47.0 | 4.00e-01 | 100.0% | 63.2% |
| 6e6oA00 | 1.20.50.10 | Mainly Alpha › Up-down Bundle › Pheromone ER-1 › Pheromone ER-1 | 0.53 | 38.0 | 3.75e-01 | 81.6% | 72.5% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3235794 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.75 | 60.0 | 4.06e-01 | 89.5% | 53.6% |
| 3967173 | 7542.1.2.1 ↗ | a/b three-layered sandwiches › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain II › Aconitase | 0.74 | 61.0 | 4.14e-01 | 97.4% | 24.7% |
| 3509190 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.73 | 62.0 | 4.85e-01 | 100.0% | 44.7% |
| 3174946 | 109.4.1.465 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SPO22 | 0.72 | 64.0 | 4.13e-01 | 100.0% | 25.9% |
| 3841191 | 604.3.1.22 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › PF31030 | 0.70 | 59.0 | 4.56e-01 | 100.0% | 43.3% |
| 3384920 | 4146.1.1.0 ↗ | alpha bundles › YqgQ-like › YqgQ-like › YqgQ-like | 0.70 | 58.0 | 5.75e-01 | 97.4% | 95.0% |
| 4819006 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.70 | 60.0 | 3.59e-01 | 97.4% | 24.2% |
| 3938459 | 5076.2.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › EI24 | 0.69 | 61.0 | 3.65e-01 | 100.0% | 37.3% |
| 3780286 | 244.1.1.6 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › Amino_oxidase | 0.68 | 58.0 | 3.21e-01 | 97.4% | 6.5% |
| 3277002 | 3252.1.1.0 ↗ | alpha arrays › SHQ1 C-terminal domain-like › SHQ1 C-terminal domain › SHQ1 C-terminal domain | 0.68 | 58.0 | 3.53e-01 | 97.4% | 15.5% |
| 3258934 | 301.6.1.0 ↗ | a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like | 0.67 | 56.0 | 3.50e-01 | 100.0% | 20.2% |
| 4396754 | 4336.1.1.1 ↗ | alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › Com_YlbF | 0.66 | 58.0 | 4.06e-01 | 97.4% | 32.2% |
| 3400028 | 3843.1.1.30 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › DUF4781 | 0.66 | 51.0 | 4.21e-01 | 100.0% | 62.4% |
| 3346189 | 109.4.1.759 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Dymeclin | 0.66 | 57.0 | 3.40e-01 | 100.0% | 24.9% |
| 3245010 | 181.1.1.11 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › DUF4473 | 0.65 | 57.0 | 4.52e-01 | 97.4% | 50.7% |
| 3693906 | 192.22.1.5 ↗ | alpha bundles › Long alpha-hairpin › Ral binding domain of RLIP76 › Ral binding domain of RLIP76 › Tho2 | 0.65 | 56.0 | 4.19e-01 | 97.4% | 43.2% |