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IMGVR_UViG_3300014538_000009-3300014538-Ga0134452_10035341
Arc-VirIMGVR_UViG_3300014538_000009-3300014538-Ga0134452_10035341
Identity
- Kingdom:
- archaea
Quality
92.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-41
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1kcgC00 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.62 | 42.0 | 2.76e-01 | 70.0% | 18.8% |
| 3cloC01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.61 | 45.0 | 2.98e-01 | 85.0% | 26.9% |
| 3m3kA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.58 | 41.0 | 2.95e-01 | 80.0% | 45.2% |
| 1ej6A04 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 37.0 | 2.42e-01 | 80.0% | 54.3% |
| 5dzyB01 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.53 | 38.0 | 3.00e-01 | 82.5% | 81.0% |
| 2hoxA03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 36.0 | 2.65e-01 | 75.0% | 47.8% |
| 5i8dA01 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.52 | 37.0 | 2.86e-01 | 82.5% | 77.7% |
| 1qhlA00 | 3.40.1140.10 | Alpha Beta › 3-Layer(aba) Sandwich › N-terminal domain of mukB › | 0.51 | 41.0 | 2.71e-01 | 100.0% | 53.7% |
| 2yfsA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.51 | 38.0 | 2.27e-01 | 97.5% | 14.7% |
| 7pjjA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 35.0 | 2.68e-01 | 80.0% | 39.2% |
| 2xzm901 | 6.20.50.180 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.51 | 35.0 | 3.04e-01 | 85.0% | 43.1% |
| 4zi9A01 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.51 | 35.0 | 2.90e-01 | 82.5% | 81.4% |
| 2i50A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.50 | 36.0 | 2.76e-01 | 82.5% | 47.5% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3786601 | 375.1.1.200 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-LSD1 | 0.60 | 42.0 | 4.32e-01 | 82.5% | 88.6% |
| 5036396 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.57 | 40.0 | 4.08e-01 | 82.5% | 82.1% |
| 3739700 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.57 | 38.0 | 4.00e-01 | 77.5% | 96.7% |
| 3826688 | 375.1.1.139 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › EDR4-like_1st | 0.57 | 38.0 | 3.94e-01 | 75.0% | 96.6% |
| 4978303 | 375.10.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha | 0.56 | 39.0 | 3.63e-01 | 82.5% | 56.4% |
| 4960851 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.55 | 38.0 | 3.95e-01 | 82.5% | 88.6% |
| 3678606 | 375.1.1.212 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_FGT1_2 | 0.54 | 37.0 | 3.85e-01 | 80.0% | 85.7% |
| 3458593 | 375.1.1.212 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_FGT1_2 | 0.54 | 38.0 | 3.65e-01 | 82.5% | 62.0% |
| 5076006 | 109.4.1.195 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_11 | 0.53 | 36.0 | 2.35e-01 | 80.0% | 20.8% |
| 3179128 | 375.1.1.211 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ima1_N | 0.52 | 37.0 | 3.80e-01 | 80.0% | 80.0% |
| 4979347 | 375.1.3.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 | 0.52 | 36.0 | 3.16e-01 | 80.0% | 42.9% |
| 3656347 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 35.0 | 3.57e-01 | 82.5% | 88.6% |
| 3594820 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 37.0 | 2.38e-01 | 95.0% | 82.5% |
| 2443833 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.50 | 37.0 | 2.63e-01 | 100.0% | 23.0% |
| 5083127 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.50 | 34.0 | 3.48e-01 | 80.0% | 100.0% |