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IMGVR_UViG_3300014656_001623-3300014656-Ga0180007_1001030612
Arc-VirIMGVR_UViG_3300014656_001623-3300014656-Ga0180007_1001030612
Identity
- Kingdom:
- archaea
Quality
52.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 157-214
Domain cluster:
representative
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3le4A00 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.67 | 39.0 | 4.02e-01 | 94.8% | 60.0% |
| 3bwsA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.67 | 53.0 | 3.34e-01 | 89.7% | 23.8% |
| 1b7tA02 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.63 | 46.0 | 4.89e-01 | 100.0% | 86.5% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 46.0 | 4.24e-01 | 100.0% | 61.6% |
| 2qmiA02 | 2.40.128.210 | Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain | 0.62 | 54.0 | 4.53e-01 | 100.0% | 79.0% |
| 6bogA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 46.0 | 4.79e-01 | 100.0% | 90.4% |
| 5i4eA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.61 | 42.0 | 4.69e-01 | 94.8% | 91.3% |
| 4cc9A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.61 | 54.0 | 3.38e-01 | 100.0% | 81.1% |
| 3h8zA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 44.0 | 4.32e-01 | 100.0% | 70.3% |
| 4c5eC02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 47.0 | 4.03e-01 | 100.0% | 52.1% |
| 2konA00 | 3.30.160.350 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.60 | 48.0 | 4.45e-01 | 94.8% | 79.3% |
| 3goxA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 46.0 | 4.90e-01 | 100.0% | 96.1% |
| 5xpyA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.60 | 51.0 | 4.24e-01 | 100.0% | 61.1% |
| 4m4zA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.59 | 45.0 | 4.95e-01 | 96.6% | 100.0% |
| 3feoB02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 46.0 | 4.07e-01 | 100.0% | 60.2% |
| 2arzA02 | 3.20.180.10 | Alpha Beta › Alpha-Beta Barrel › Split barrel-like › PNP-oxidase-like | 0.57 | 45.0 | 4.05e-01 | 93.1% | 80.7% |
| 4ccdA03 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.56 | 47.0 | 3.38e-01 | 100.0% | 43.5% |
| 2gc9B00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.56 | 47.0 | 3.56e-01 | 100.0% | 75.8% |
| 4ggtB00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.55 | 47.0 | 3.95e-01 | 100.0% | 94.3% |
| 1ei5A02 | 2.40.128.50 | Mainly Beta › Beta Barrel › Lipocalin › | 0.55 | 46.0 | 4.20e-01 | 100.0% | 85.4% |
| 1vw5A00 | 3.30.70.1420 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Structure from the mobile metagenome of cole harbour salt marsh: integron cassette protein hfx_cass1 | 0.54 | 39.0 | 2.96e-01 | 79.3% | 31.1% |
| 2cudA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.53 | 46.0 | 4.15e-01 | 100.0% | 70.9% |
| 2eqmA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 38.0 | 3.95e-01 | 100.0% | 90.6% |
| 4ifaA01 | 3.40.33.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP | 0.51 | 42.0 | 2.80e-01 | 98.3% | 54.1% |
| 3kl7A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.50 | 38.0 | 2.69e-01 | 86.2% | 84.5% |
| 3k30A03 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.50 | 35.0 | 2.81e-01 | 75.9% | 66.2% |
| 1wdiA02 | 2.40.10.240 | Mainly Beta › Beta Barrel › Thrombin, subunit H › QueA-like | 0.50 | 42.0 | 4.00e-01 | 100.0% | 98.6% |
| 3p8bB02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 40.0 | 4.00e-01 | 100.0% | 87.1% |
| 1mk1A00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.50 | 35.0 | 2.57e-01 | 75.9% | 71.7% |
ECOD (57)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3432796 | 5.1.10.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed | 0.74 | 61.0 | 5.49e-01 | 91.4% | 81.2% |
| None | — | 0.73 | 62.0 | 3.81e-01 | 94.8% | 19.1% | |
| 3655121 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.71 | 59.0 | 3.46e-01 | 91.4% | 33.6% |
| 3692168 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.71 | 59.0 | 3.43e-01 | 93.1% | 13.8% |
| 3886322 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.70 | 59.0 | 3.56e-01 | 94.8% | 19.7% |
| 4994957 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 51.0 | 5.23e-01 | 100.0% | 81.8% |
| 4963650 | 4.1.1.488 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7346 | 0.69 | 46.0 | 4.79e-01 | 100.0% | 74.5% |
| 4950396 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 46.0 | 4.72e-01 | 100.0% | 74.5% |
| 4997767 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 44.0 | 4.88e-01 | 94.8% | 86.7% |
| 3823898 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.67 | 46.0 | 4.77e-01 | 93.1% | 76.4% |
| 3617111 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.67 | 49.0 | 4.19e-01 | 100.0% | 50.0% |
| 4946165 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 48.0 | 4.94e-01 | 100.0% | 80.0% |
| 3169607 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.66 | 48.0 | 4.41e-01 | 100.0% | 60.0% |
| 5058671 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 46.0 | 4.77e-01 | 100.0% | 78.2% |
| 4357819 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.66 | 48.0 | 4.51e-01 | 100.0% | 64.3% |
| 4980648 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 49.0 | 4.57e-01 | 100.0% | 65.7% |
| 3715776 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 43.0 | 4.12e-01 | 100.0% | 60.0% |
| 4975150 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 48.0 | 4.82e-01 | 100.0% | 76.7% |
| 5013892 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 49.0 | 5.01e-01 | 100.0% | 83.6% |
| 3907619 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.65 | 48.0 | 4.16e-01 | 100.0% | 52.9% |
| 3302818 | 4.1.1.236 ↗ | beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 | 0.65 | 47.0 | 4.79e-01 | 100.0% | 80.0% |
| 4967397 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.65 | 48.0 | 4.65e-01 | 100.0% | 70.8% |
| 5033075 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 45.0 | 4.67e-01 | 100.0% | 78.2% |
| None | — | 0.65 | 47.0 | 2.60e-01 | 100.0% | 5.2% | |
| 3586487 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 47.0 | 4.12e-01 | 100.0% | 52.9% |
| 5047657 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.65 | 50.0 | 5.11e-01 | 94.8% | 90.9% |
| 4952887 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 45.0 | 4.65e-01 | 100.0% | 78.2% |
| 3932433 | 5.1.4.267 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, PF28639 | 0.64 | 54.0 | 3.28e-01 | 96.6% | 30.7% |
| None | — | 0.64 | 47.0 | 2.58e-01 | 100.0% | 5.7% | |
| 5060760 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.64 | 46.0 | 4.50e-01 | 100.0% | 69.2% |
| 3474715 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 47.0 | 4.50e-01 | 100.0% | 69.2% |
| 5040416 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 44.0 | 4.71e-01 | 100.0% | 86.0% |
| 3510526 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 48.0 | 5.00e-01 | 100.0% | 87.3% |
| 3616243 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 46.0 | 4.71e-01 | 100.0% | 81.8% |
| 4947995 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 45.0 | 4.63e-01 | 100.0% | 80.0% |
| 5079023 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 43.0 | 4.74e-01 | 96.6% | 93.3% |
| 5025079 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 46.0 | 4.74e-01 | 100.0% | 81.8% |
| 4485741 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.62 | 54.0 | 3.06e-01 | 100.0% | 13.4% |
| 3914746 | 4.1.1.128 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_4 | 0.61 | 45.0 | 4.29e-01 | 100.0% | 65.7% |
| 4662947 | 4.1.1.297 ↗ | beta barrels › SH3 › SH3 › SH3 › YajC | 0.61 | 41.0 | 4.02e-01 | 100.0% | 63.1% |
| 3570399 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 50.0 | 4.88e-01 | 100.0% | 80.0% |
| 3999240 | 5.1.5.45 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PROPPIN | 0.61 | 52.0 | 3.58e-01 | 98.3% | 55.8% |
| 4995678 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 46.0 | 4.77e-01 | 100.0% | 87.3% |
| 3517728 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.61 | 45.0 | 4.23e-01 | 100.0% | 65.7% |
| 3576438 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 45.0 | 3.89e-01 | 100.0% | 52.2% |
| 4011604 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.59 | 47.0 | 4.36e-01 | 100.0% | 68.0% |
| 1140051 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.59 | 46.0 | 5.02e-01 | 98.3% | 100.0% |
| 4026957 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 43.0 | 4.32e-01 | 100.0% | 76.7% |
| 4058174 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.56 | 42.0 | 4.12e-01 | 100.0% | 72.3% |
| 3279448 | 9.1.1.17 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › MoaF | 0.56 | 47.0 | 3.75e-01 | 100.0% | 72.2% |
| 862 | 9.4.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains › DAP_B | 0.55 | 46.0 | 4.20e-01 | 100.0% | 85.4% |
| 4380184 | 9.11.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like › MliC | 0.55 | 46.0 | 4.11e-01 | 100.0% | 95.5% |
| 4816818 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.53 | 37.0 | 3.89e-01 | 100.0% | 93.6% |
| 3765126 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.53 | 45.0 | 4.65e-01 | 100.0% | 100.0% |
| 3891010 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 42.0 | 4.16e-01 | 93.1% | 83.3% |
| 3948516 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.52 | 41.0 | 4.01e-01 | 91.4% | 98.5% |
| 3909317 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.52 | 41.0 | 4.45e-01 | 93.1% | 100.0% |
D2
medium
residues 81-139