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IMGVR_UViG_3300014656_004688-3300014656-Ga0180007_100125904
Arc-VirIMGVR_UViG_3300014656_004688-3300014656-Ga0180007_100125904
Identity
- Kingdom:
- archaea
Quality
64.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 89-176
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1pm3A00 | 2.30.30.240 | Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain | 0.66 | 46.0 | 5.09e-01 | 89.8% | 94.2% |
| 2yztA00 | 3.30.160.250 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.65 | 35.0 | 3.96e-01 | 77.3% | 68.2% |
| 3ed4A02 | 3.30.1120.10 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.61 | 38.0 | 3.92e-01 | 100.0% | 65.1% |
| 3tu3B01 | 3.30.720.80 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.60 | 37.0 | 3.98e-01 | 89.8% | 71.1% |
| 3au4A04 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 40.0 | 4.03e-01 | 96.6% | 68.8% |
| 6az1g01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.58 | 40.0 | 2.78e-01 | 70.5% | 94.9% |
| 7c9rH01 | 3.90.50.10 | Alpha Beta › Alpha-Beta Complex › Photosynthetic Reaction Center; Chain H, domain 2 › Photosynthetic Reaction Center, subunit H, domain 2 | 0.57 | 50.0 | 4.27e-01 | 100.0% | 73.6% |
| 1rvjH02 | 3.90.50.10 | Alpha Beta › Alpha-Beta Complex › Photosynthetic Reaction Center; Chain H, domain 2 › Photosynthetic Reaction Center, subunit H, domain 2 | 0.55 | 48.0 | 4.27e-01 | 100.0% | 81.1% |
| 1tfkA00 | 3.10.450.200 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 37.0 | 3.66e-01 | 92.0% | 67.0% |
| 3gd0A02 | 3.30.920.50 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Beta-1,3-glucanase, C-terminal domain | 0.53 | 41.0 | 3.87e-01 | 85.2% | 80.4% |
| 2m3xC02 | 2.40.10.360 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.53 | 37.0 | 4.12e-01 | 96.6% | 92.8% |
| 4b9wA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 33.0 | 3.83e-01 | 86.4% | 98.2% |
| 4ytlA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 30.0 | 3.65e-01 | 86.4% | 98.0% |
| 3dsoA00 | 2.40.10.300 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Copper resistance protein K | 0.52 | 32.0 | 3.62e-01 | 94.3% | 81.8% |
| 2eqkA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 33.0 | 3.55e-01 | 86.4% | 76.7% |
| 1ssfA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 31.0 | 3.65e-01 | 86.4% | 96.4% |
| 2codA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 36.0 | 3.59e-01 | 95.5% | 70.8% |
| 3mp6A05 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 30.0 | 3.41e-01 | 87.5% | 81.0% |
| 3ntkA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 29.0 | 3.08e-01 | 87.5% | 61.3% |
| 3mezD00 | 2.90.10.10 | Mainly Beta › Orthogonal Prism › Agglutinin, subunit A › Bulb-type lectin domain | 0.50 | 37.0 | 3.45e-01 | 78.4% | 79.5% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3976684 | 7089.1.1.0 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD | 0.64 | 39.0 | 4.05e-01 | 96.6% | 65.0% |
| 5046265 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.64 | 47.0 | 5.15e-01 | 90.9% | 97.1% |
| 5001148 | 4.6.1.0 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.59 | 44.0 | 4.64e-01 | 87.5% | 90.0% |
| 4979795 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.58 | 48.0 | 4.84e-01 | 93.2% | 90.0% |
| 4117409 | 880.1.1.1 ↗ | a+b duplicates or obligate multimers › ADC synthase › ADC synthase › ADC synthase › Chorismate_bind | 0.58 | 42.0 | 2.57e-01 | 75.0% | 80.2% |
| 3953675 | 330.7.1.0 ↗ | a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain | 0.57 | 33.0 | 3.85e-01 | 89.8% | 78.5% |
| 3897826 | 220.1.1.161 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26659 | 0.57 | 43.0 | 4.01e-01 | 93.2% | 62.6% |
| 4966270 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.55 | 47.0 | 4.69e-01 | 96.6% | 95.6% |
| 5024232 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.55 | 47.0 | 4.63e-01 | 95.5% | 90.5% |
| 4170699 | 5.1.3.4 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › WD40 | 0.54 | 40.0 | 2.71e-01 | 78.4% | 60.3% |
| 3200493 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.53 | 31.0 | 3.65e-01 | 81.8% | 89.1% |
| 3723101 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 35.0 | 4.00e-01 | 78.4% | 100.0% |
| 1141859 | 5.1.10.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed › DUF6849 | 0.53 | 37.0 | 4.03e-01 | 97.7% | 88.9% |
| 3660003 | 5.1.10.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed › ANAPC4_WD40 | 0.52 | 39.0 | 4.05e-01 | 93.2% | 86.3% |
| 5046207 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 43.0 | 3.03e-01 | 90.9% | 43.7% |
| 3658930 | 5.1.4.336 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IP5PC_F | 0.51 | 37.0 | 2.34e-01 | 94.3% | 14.8% |
| 3776456 | 5.1.10.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed | 0.51 | 34.0 | 3.51e-01 | 90.9% | 72.6% |
| 3511177 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.51 | 44.0 | 2.84e-01 | 95.5% | 33.6% |
| 4124149 | 5.1.4.266 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_IFT122_1st | 0.50 | 39.0 | 2.53e-01 | 95.5% | 18.9% |
| 3219631 | 5.1.11.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › ANAPC4_WD40, Beta-prop_WDR35_2nd, Beta-prop_WDR35_TULP_N | 0.50 | 43.0 | 2.52e-01 | 94.3% | 74.4% |
D2
medium
residues 15-86
Domain cluster:
representative