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IMGVR_UViG_3300014823_000012-3300014823-Ga0120170_10045296
Arc-VirIMGVR_UViG_3300014823_000012-3300014823-Ga0120170_10045296
Identity
- Kingdom:
- archaea
Quality
85.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-59
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5jc3A02 | 1.20.1320.30 | Mainly Alpha › Up-down Bundle › phosphoenolpyruvate carboxylase, domain 3 › | 0.64 | 44.0 | 3.45e-01 | 82.8% | 33.3% |
| 1oxjA02 | 1.25.40.170 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Smaug, PHAT domain | 0.61 | 50.0 | 4.26e-01 | 100.0% | 63.3% |
| 4w4tB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 46.0 | 2.83e-01 | 93.1% | 12.9% |
| 2pmrA00 | 1.20.1270.90 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like | 0.59 | 43.0 | 4.01e-01 | 82.8% | 61.8% |
| 1ihbA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.58 | 42.0 | 3.18e-01 | 87.9% | 30.1% |
| 3uxgA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.58 | 41.0 | 3.07e-01 | 87.9% | 27.6% |
| 2kj8A00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.58 | 49.0 | 3.92e-01 | 96.6% | 83.1% |
| 3rxzA00 | 3.20.20.370 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase | 0.58 | 44.0 | 2.86e-01 | 100.0% | 17.5% |
| 6mgiA03 | 1.20.1440.90 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Phosphoenolpyruvate/pyruvate domain | 0.56 | 42.0 | 3.28e-01 | 82.8% | 50.4% |
| 3kezA01 | 1.25.40.390 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.55 | 47.0 | 3.18e-01 | 98.3% | 60.0% |
| 8fnyA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.55 | 46.0 | 3.25e-01 | 98.3% | 53.4% |
| 2yevC00 | 6.10.280.110 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 40.0 | 3.97e-01 | 82.8% | 76.2% |
| 2h21A02 | 3.90.1420.10 | Alpha Beta › Alpha-Beta Complex › set domain protein methyltransferase, domain 2 › Rubisco LSMT, substrate-binding domain | 0.54 | 38.0 | 2.85e-01 | 84.5% | 26.7% |
| 3iuzA00 | 3.10.180.50 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › | 0.53 | 42.0 | 2.74e-01 | 93.1% | 46.6% |
| 3i8bA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.53 | 39.0 | 2.56e-01 | 81.0% | 70.1% |
| 6pnjL00 | 1.20.1240.10 | Mainly Alpha › Up-down Bundle › Photosystem 1 Reaction Centre Subunit Xi; Chain: L; › Photosystem I PsaL, reaction centre subunit XI | 0.53 | 38.0 | 2.81e-01 | 77.6% | 55.8% |
| 1e1hB01 | 1.20.58.540 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 41.0 | 3.51e-01 | 98.3% | 50.5% |
| 4nsmA00 | 6.10.250.2770 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.52 | 40.0 | 3.81e-01 | 86.2% | 100.0% |
| 4a2qA01 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.50 | 41.0 | 3.55e-01 | 91.4% | 75.3% |
| 3k8pC01 | 1.20.58.1440 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.50 | 41.0 | 3.47e-01 | 96.6% | 69.5% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4018497 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.67 | 58.0 | 4.44e-01 | 100.0% | 74.3% |
| 3851039 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.63 | 44.0 | 3.54e-01 | 82.8% | 35.2% |
| 3685470 | 226.1.1.0 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain | 0.61 | 51.0 | 4.11e-01 | 100.0% | 93.6% |
| 5040859 | 632.11.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like › DUF357 | 0.60 | 43.0 | 3.87e-01 | 82.8% | 52.9% |
| 4015598 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.60 | 46.0 | 3.91e-01 | 93.1% | 48.6% |
| 3596405 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 51.0 | 4.07e-01 | 100.0% | 52.0% |
| 4186195 | 1079.1.1.8 ↗ | alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA › LysE | 0.59 | 50.0 | 3.43e-01 | 96.6% | 52.4% |
| 3633283 | 192.17.1.0 ↗ | alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like | 0.58 | 44.0 | 4.52e-01 | 82.8% | 92.7% |
| 3512654 | 109.3.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank | 0.58 | 43.0 | 3.44e-01 | 87.9% | 38.4% |
| 3759004 | 622.1.1.22 ↗ | alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain › TF_AP-2 | 0.58 | 43.0 | 3.43e-01 | 82.8% | 63.2% |
| 3598078 | 148.1.1.0 ↗ | alpha arrays › Histone-like › Histone-related › Histone | 0.57 | 41.0 | 3.43e-01 | 81.0% | 42.9% |
| 3848807 | 109.3.1.96 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 | 0.57 | 41.0 | 3.01e-01 | 87.9% | 27.1% |
| 3532776 | 109.3.1.8 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 | 0.57 | 46.0 | 3.59e-01 | 94.8% | 64.3% |
| 3426236 | 603.2.1.0 ↗ | alpha bundles › STAT-like › STAT › STAT | 0.56 | 47.0 | 3.51e-01 | 100.0% | 66.3% |
| 3928684 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.55 | 45.0 | 3.88e-01 | 100.0% | 83.8% |
| 3486873 | 109.3.1.166 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3 | 0.54 | 43.0 | 3.29e-01 | 94.8% | 60.0% |
| 4029330 | 109.50.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Pre-mRNA-splicing factor 38A › Pre-mRNA-splicing factor 38A › PRP38 | 0.54 | 44.0 | 3.14e-01 | 93.1% | 33.3% |
| 223850 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.54 | 44.0 | 3.11e-01 | 96.6% | 54.4% |
| 3193048 | 1128.1.1.0 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein | 0.51 | 38.0 | 3.19e-01 | 79.3% | 53.0% |