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IMGVR_UViG_3300014823_000012-3300014823-Ga0120170_10045297

Arc-Vir

IMGVR_UViG_3300014823_000012-3300014823-Ga0120170_10045297

Quality

76.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-59
PDB
Domain cluster: representative
CATH (49)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2fjrA02 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.81 63.0 4.92e-01 96.3% 40.7%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.79 62.0 6.05e-01 96.3% 78.3%
3by7E00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.78 64.0 5.75e-01 92.6% 82.9%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.74 63.0 6.18e-01 98.1% 86.7%
3jb9F00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.74 62.0 5.45e-01 96.3% 72.0%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 58.0 5.53e-01 96.3% 73.4%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.73 60.0 5.71e-01 96.3% 82.1%
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.72 57.0 5.93e-01 98.1% 96.0%
2rm4A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.72 60.0 5.73e-01 98.1% 90.9%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 55.0 5.18e-01 98.1% 68.1%
6bhdA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 57.0 5.47e-01 98.1% 77.8%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 57.0 5.17e-01 98.1% 65.8%
1d3bB00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.71 58.0 5.19e-01 96.3% 85.2%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 58.0 5.75e-01 98.1% 89.3%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.70 54.0 5.47e-01 94.4% 88.5%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.70 53.0 5.53e-01 94.4% 93.8%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.68 56.0 5.12e-01 98.1% 72.7%
2e70A00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 55.0 5.09e-01 100.0% 71.8%
3k8uA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.67 57.0 4.39e-01 100.0% 81.7%
1fhoA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.67 56.0 4.50e-01 100.0% 68.1%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 54.0 5.31e-01 98.1% 86.4%
3ceyB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 55.0 4.11e-01 98.1% 38.3%
1y71A00 2.30.30.430 Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain 0.64 54.0 4.38e-01 98.1% 55.0%
2rqrA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 54.0 4.29e-01 100.0% 51.3%
2lg1A02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 54.0 4.28e-01 100.0% 72.2%
7ctpA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 52.0 4.10e-01 96.3% 80.8%
1h10A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 53.0 4.23e-01 100.0% 72.6%
4chmB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 52.0 4.07e-01 98.1% 71.0%
2cocA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 52.0 4.36e-01 100.0% 81.0%
3feoB02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 51.0 4.53e-01 98.1% 63.9%
4chjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 53.0 4.11e-01 100.0% 62.1%
1mrzB02 2.40.30.30 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like 0.60 48.0 3.84e-01 98.1% 42.9%
2nr4A01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 47.0 3.65e-01 94.4% 88.0%
2z4hA01 2.40.128.300 Mainly Beta › Beta Barrel › Lipocalin › NlpE, N-terminal domain 0.58 45.0 4.03e-01 87.0% 68.4%
4hz9B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 42.0 3.34e-01 81.5% 88.6%
1olzA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 44.0 2.66e-01 94.4% 40.8%
3qwmA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 48.0 3.78e-01 100.0% 70.1%
1wczA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.56 42.0 3.41e-01 85.2% 65.2%
2odpA03 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.56 42.0 3.16e-01 87.0% 70.9%
3oblA00 2.40.128.450 Mainly Beta › Beta Barrel › Lipocalin › 0.56 44.0 3.50e-01 94.4% 55.3%
3gvzA00 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.56 49.0 3.16e-01 100.0% 88.7%
2kgyA00 3.30.505.20 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › 0.55 43.0 3.78e-01 92.6% 83.7%
3rioA01 2.30.24.10 Mainly Beta › Roll › Transcription Regulation, Sacy; Chain A › CAT RNA-binding domain 0.55 37.0 3.51e-01 70.4% 66.2%
4q66D01 6.20.120.50 Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 38.0 3.50e-01 74.1% 58.9%
2x0qA01 3.30.310.280 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.54 44.0 3.34e-01 90.7% 44.4%
3lhnA00 2.40.128.640 Mainly Beta › Beta Barrel › Lipocalin › 0.53 42.0 3.55e-01 98.1% 86.9%
2gu3A02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 39.0 3.79e-01 87.0% 85.7%
6iikB00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.51 41.0 2.63e-01 100.0% 90.1%
1mw7A02 3.30.70.980 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain 0.51 37.0 3.29e-01 98.1% 51.7%
ECOD (86)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4044896 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 64.0 5.76e-01 96.3% 64.0%
4058174 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.80 67.0 6.28e-01 98.1% 76.9%
3268160 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 69.0 5.80e-01 98.1% 80.0%
4656461 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.77 61.0 5.98e-01 98.1% 80.0%
3631165 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 65.0 5.69e-01 98.1% 77.6%
3474715 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 59.0 5.64e-01 100.0% 73.8%
4293453 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 64.0 5.66e-01 98.1% 68.8%
4011604 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.74 64.0 5.75e-01 98.1% 70.7%
3587906 4.1.1.46 beta barrels › SH3 › SH3 › SH3 › VEG 0.74 62.0 5.53e-01 98.1% 76.2%
4079197 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 63.0 5.47e-01 98.1% 62.4%
4029082 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 55.0 5.66e-01 98.1% 90.0%
3586487 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 58.0 5.05e-01 98.1% 56.5%
3996278 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 57.0 4.48e-01 98.1% 39.2%
5022491 4.1.1.182 beta barrels › SH3 › SH3 › SH3 › DUF2097 0.73 62.0 5.37e-01 98.1% 64.7%
3492982 4.1.1.12 beta barrels › SH3 › SH3 › SH3 › PWWP 0.72 59.0 4.48e-01 100.0% 37.0%
5053934 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 55.0 4.73e-01 98.1% 51.1%
4606231 1.1.5.25 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.72 59.0 4.98e-01 92.6% 82.8%
140210 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 55.0 5.18e-01 98.1% 68.1%
3852545 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 58.0 5.62e-01 98.1% 81.7%
4426276 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 60.0 5.56e-01 96.3% 88.6%
3651964 4.1.1.249 beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.71 58.0 4.53e-01 98.1% 41.7%
3660922 4.1.1.249 beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.71 57.0 5.47e-01 98.1% 76.9%
3795384 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 60.0 3.98e-01 98.1% 23.7%
3420348 4.1.1.306 beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N 0.71 55.0 5.51e-01 98.1% 85.5%
4041376 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.71 60.0 5.36e-01 98.1% 71.2%
3576940 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 60.0 3.94e-01 98.1% 22.7%
3625264 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 59.0 4.96e-01 98.1% 53.7%
4121981 4.1.1.325 beta barrels › SH3 › SH3 › SH3 › KOW, KOW2_Spt5 0.71 58.0 4.49e-01 98.1% 40.8%
4242302 4.1.1.249 beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.71 58.0 5.38e-01 98.1% 72.9%
3821920 4.1.1.283 beta barrels › SH3 › SH3 › SH3 › KOW6_SPT51-2 0.71 58.0 5.85e-01 98.1% 92.7%
3198731 4.1.1.249 beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.71 58.0 4.44e-01 98.1% 39.2%
3581896 4.1.1.249 beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.70 57.0 5.42e-01 98.1% 76.9%
4000280 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 55.0 5.55e-01 98.1% 87.3%
3996279 4.1.1.34 beta barrels › SH3 › SH3 › SH3 › MBT 0.70 59.0 5.29e-01 98.1% 67.5%
3244497 4.1.1.187 beta barrels › SH3 › SH3 › SH3 › DIRP 0.70 58.0 4.26e-01 98.1% 34.0%
3220929 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 60.0 5.43e-01 98.1% 74.7%
3486326 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 57.0 5.69e-01 98.1% 92.7%
4927654 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 59.0 5.61e-01 98.1% 84.6%
3428486 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.70 54.0 4.80e-01 98.1% 58.7%
4268386 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 58.0 5.42e-01 98.1% 74.3%
3398496 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.69 55.0 5.55e-01 98.1% 89.1%
3326980 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.69 54.0 5.25e-01 98.1% 78.3%
4937587 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.69 59.0 4.25e-01 100.0% 90.9%
3924377 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 58.0 5.82e-01 98.1% 94.5%
4418620 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.69 51.0 2.80e-01 94.4% 4.4%
3484822 4.1.1.34 beta barrels › SH3 › SH3 › SH3 › MBT 0.69 57.0 5.09e-01 98.1% 65.0%
4024915 4.1.1.237 beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.68 57.0 5.39e-01 98.1% 78.5%
3217772 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 58.0 5.06e-01 98.1% 64.7%
3486329 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 56.0 5.34e-01 98.1% 78.5%
3903213 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.68 51.0 3.63e-01 94.4% 25.7%
3703933 4.1.1.237 beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.67 57.0 5.45e-01 98.1% 86.2%
3928711 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 56.0 4.90e-01 98.1% 61.2%
4380345 4.1.1.257 beta barrels › SH3 › SH3 › SH3 › Flag1_repress 0.67 57.0 4.97e-01 98.1% 63.5%
3924375 4.1.1.237 beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.67 58.0 5.24e-01 100.0% 94.7%
3240407 4.1.1.237 beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.67 56.0 5.22e-01 98.1% 82.9%
4994620 1.1.5.11 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › UbiD 0.66 58.0 3.90e-01 100.0% 81.0%
4113861 236.2.1.1 beta barrels › GroES-like › SacY-like RNA-binding domain › SacY-like RNA-binding domain › CAT_RBD 0.66 39.0 3.91e-01 98.1% 58.2%
3642001 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.66 56.0 5.19e-01 98.1% 88.6%
3709029 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 53.0 5.19e-01 98.1% 85.0%
3270288 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.65 56.0 4.60e-01 98.1% 77.0%
3264808 4.1.1.237 beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.65 55.0 5.18e-01 100.0% 91.4%
3302829 4.1.1.237 beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.65 53.0 5.05e-01 98.1% 78.5%
3965254 4.1.1.222 beta barrels › SH3 › SH3 › SH3 › DUF6948 0.65 54.0 4.56e-01 96.3% 80.0%
3500872 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.65 56.0 4.52e-01 98.1% 79.0%
3296865 4.1.1.237 beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.65 53.0 4.35e-01 98.1% 48.6%
4014881 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 54.0 5.31e-01 98.1% 93.3%
3699652 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 54.0 5.14e-01 98.1% 83.1%
4403216 4.1.1.237 beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.65 54.0 5.10e-01 100.0% 94.3%
2137682 1.1.5.32 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZNR 0.63 53.0 4.41e-01 98.1% 93.1%
3343692 4.2.1.6 beta barrels › SH3 › SAND › SAND › SAND_ULT1 0.63 53.0 4.23e-01 100.0% 66.9%
3268923 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 53.0 4.36e-01 98.1% 59.0%
4932493 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 50.0 4.80e-01 96.3% 76.9%
5018860 219.1.1.28 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP 0.63 53.0 3.97e-01 100.0% 88.0%
3412833 220.1.1.161 beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26659 0.62 52.0 4.16e-01 100.0% 66.7%
3576021 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.61 53.0 4.06e-01 100.0% 58.5%
3960372 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.61 47.0 4.13e-01 87.0% 84.7%
3952718 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.61 47.0 3.31e-01 87.0% 39.5%
4518211 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.61 46.0 3.30e-01 87.0% 39.5%
None 0.61 47.0 3.17e-01 87.0% 34.9%
4247805 1.1.5.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.60 46.0 3.16e-01 87.0% 37.9%
3950458 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.59 44.0 3.18e-01 87.0% 41.1%
2526961 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.58 47.0 3.12e-01 88.9% 37.6%
4000199 3794.1.1.3 a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit › ACCA_BT 0.57 39.0 3.55e-01 85.2% 50.0%
3487390 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.54 46.0 3.51e-01 100.0% 60.0%
None 0.54 47.0 3.15e-01 100.0% 57.1%
3035660 3794.1.1.1 a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit › PCC_BT 0.53 45.0 3.41e-01 98.1% 65.2%