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IMGVR_UViG_3300014827_000006-3300014827-Ga0120171_10003325
Arc-VirIMGVR_UViG_3300014827_000006-3300014827-Ga0120171_10003325
Identity
- Kingdom:
- archaea
Quality
80.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-54
Domain cluster:
representative
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3eurA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.68 | 52.0 | 3.88e-01 | 86.5% | 79.3% |
| 4m6rA00 | 3.40.225.10 | Alpha Beta › 3-Layer(aba) Sandwich › L-fuculose-1-phosphate Aldolase › Class II aldolase/adducin N-terminal domain | 0.66 | 56.0 | 3.74e-01 | 100.0% | 84.8% |
| 2opiA00 | 3.40.225.10 | Alpha Beta › 3-Layer(aba) Sandwich › L-fuculose-1-phosphate Aldolase › Class II aldolase/adducin N-terminal domain | 0.65 | 54.0 | 3.73e-01 | 100.0% | 84.2% |
| 3eytB00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.64 | 49.0 | 3.60e-01 | 88.5% | 79.2% |
| 4xxfA00 | 3.40.225.10 | Alpha Beta › 3-Layer(aba) Sandwich › L-fuculose-1-phosphate Aldolase › Class II aldolase/adducin N-terminal domain | 0.64 | 53.0 | 3.50e-01 | 100.0% | 67.5% |
| 6lyxA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.64 | 53.0 | 4.20e-01 | 98.1% | 90.6% |
| 4grfA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.63 | 54.0 | 4.05e-01 | 100.0% | 90.7% |
| 6btdA00 | 3.40.225.10 | Alpha Beta › 3-Layer(aba) Sandwich › L-fuculose-1-phosphate Aldolase › Class II aldolase/adducin N-terminal domain | 0.63 | 51.0 | 3.59e-01 | 100.0% | 83.7% |
| 2dkhA03 | 3.40.30.20 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Phenol hydroxylase, C-terminal dimerisation domain | 0.63 | 53.0 | 3.60e-01 | 100.0% | 69.0% |
| 4fo5A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.63 | 48.0 | 3.66e-01 | 88.5% | 82.4% |
| 3fk8A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.61 | 52.0 | 3.95e-01 | 100.0% | 88.5% |
| 3pp2A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.60 | 47.0 | 3.78e-01 | 90.4% | 45.5% |
| 2hq9B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.60 | 44.0 | 3.29e-01 | 80.8% | 83.9% |
| 7s5oA01 | 3.50.70.20 | Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › Cytochrome P460 | 0.60 | 48.0 | 3.63e-01 | 94.2% | 64.3% |
| 3jb9L00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.59 | 51.0 | 3.21e-01 | 100.0% | 34.1% |
| 2r0cA03 | 3.40.30.120 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › | 0.59 | 49.0 | 3.93e-01 | 100.0% | 67.2% |
| 6brdA03 | 3.40.30.120 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › | 0.59 | 48.0 | 4.11e-01 | 100.0% | 70.5% |
| 4k2xA03 | 3.40.30.120 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › | 0.58 | 49.0 | 3.93e-01 | 100.0% | 79.5% |
| 1wjkA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.58 | 43.0 | 3.94e-01 | 88.5% | 100.0% |
| 5fhiA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.57 | 48.0 | 4.32e-01 | 100.0% | 88.2% |
| 3r4cA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.57 | 48.0 | 3.42e-01 | 98.1% | 51.5% |
| 2m3xC02 | 2.40.10.360 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.56 | 48.0 | 4.46e-01 | 100.0% | 87.0% |
| 1eerC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 37.0 | 3.07e-01 | 71.2% | 66.0% |
| 4qfkA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.52 | 36.0 | 2.92e-01 | 75.0% | 87.0% |
| 1ub1A00 | 3.30.890.10 | Alpha Beta › 2-Layer Sandwich › Methyl-cpg-binding Protein 2; Chain A › Methyl-cpg-binding Protein 2; Chain A | 0.52 | 40.0 | 3.15e-01 | 88.5% | 56.0% |
| 2o8lA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.52 | 40.0 | 3.39e-01 | 92.3% | 95.0% |
| 3gv1A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.52 | 41.0 | 3.24e-01 | 100.0% | 91.4% |
| 4py5A01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.52 | 35.0 | 3.18e-01 | 92.3% | 51.4% |
| 4i43B02 | 3.30.43.40 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 › Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding domain | 0.51 | 35.0 | 2.78e-01 | 73.1% | 78.1% |
| 1vccA00 | 3.30.66.10 | Alpha Beta › 2-Layer Sandwich › Viral Topoisomerase I › DNA topoisomerase I domain | 0.51 | 34.0 | 3.05e-01 | 71.2% | 88.3% |
| 4g7nA02 | 3.30.1120.130 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.50 | 38.0 | 3.24e-01 | 94.2% | 46.4% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1400361 | 5.1.3.34 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF5128 | 0.74 | 66.0 | 3.94e-01 | 100.0% | 23.2% |
| 4287774 | 2485.1.1.105 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › PF29430 | 0.70 | 53.0 | 3.97e-01 | 86.5% | 62.1% |
| None | — | 0.68 | 51.0 | 2.99e-01 | 86.5% | 18.5% | |
| 3693539 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.68 | 58.0 | 4.03e-01 | 98.1% | 75.6% |
| 4319653 | 2485.1.1.105 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › PF29430 | 0.68 | 51.0 | 3.82e-01 | 86.5% | 66.9% |
| 5049511 | 281.1.1.1 ↗ | a+b three layers › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › Aldolase_II | 0.68 | 57.0 | 3.86e-01 | 100.0% | 79.1% |
| 3685086 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.67 | 58.0 | 4.17e-01 | 100.0% | 85.2% |
| 4973781 | 281.1.1.1 ↗ | a+b three layers › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › Aldolase_II | 0.67 | 49.0 | 3.25e-01 | 76.9% | 21.6% |
| 3962206 | 281.1.1.0 ↗ | a+b three layers › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase | 0.67 | 56.0 | 3.68e-01 | 98.1% | 71.2% |
| 4255852 | 281.1.1.1 ↗ | a+b three layers › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › Aldolase_II | 0.66 | 49.0 | 3.18e-01 | 78.8% | 19.5% |
| 4956329 | 281.1.1.1 ↗ | a+b three layers › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › Aldolase_II | 0.65 | 54.0 | 3.79e-01 | 100.0% | 91.1% |
| 3934466 | 281.1.1.1 ↗ | a+b three layers › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › Aldolase_II | 0.65 | 48.0 | 3.00e-01 | 78.8% | 16.6% |
| 3598652 | 281.1.1.0 ↗ | a+b three layers › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase | 0.65 | 54.0 | 3.70e-01 | 100.0% | 87.9% |
| 3968418 | 281.1.1.1 ↗ | a+b three layers › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › Aldolase_II | 0.65 | 54.0 | 3.51e-01 | 98.1% | 67.1% |
| 3242312 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.65 | 55.0 | 3.41e-01 | 94.2% | 28.3% |
| 4046011 | 281.1.1.1 ↗ | a+b three layers › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › Aldolase_II | 0.64 | 54.0 | 3.61e-01 | 100.0% | 75.2% |
| 3290595 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.64 | 55.0 | 4.57e-01 | 100.0% | 76.8% |
| 4486447 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.64 | 55.0 | 3.20e-01 | 100.0% | 17.5% |
| 4933877 | 281.1.1.1 ↗ | a+b three layers › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › Aldolase_II | 0.64 | 53.0 | 3.62e-01 | 100.0% | 78.6% |
| 4194904 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.64 | 53.0 | 4.49e-01 | 100.0% | 74.7% |
| 3480667 | 281.1.1.1 ↗ | a+b three layers › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › Aldolase_II | 0.64 | 47.0 | 2.93e-01 | 78.8% | 16.0% |
| 4962069 | 281.1.1.1 ↗ | a+b three layers › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › Aldolase_II | 0.64 | 52.0 | 3.62e-01 | 100.0% | 81.2% |
| 3514692 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.63 | 49.0 | 3.89e-01 | 88.5% | 45.2% |
| 4491080 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.63 | 55.0 | 3.13e-01 | 100.0% | 19.6% |
| 5000115 | 281.1.1.1 ↗ | a+b three layers › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › Aldolase_II | 0.62 | 51.0 | 3.66e-01 | 100.0% | 92.8% |
| 3439915 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.62 | 52.0 | 3.32e-01 | 100.0% | 45.1% |
| 5077668 | 281.1.1.1 ↗ | a+b three layers › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › Aldolase_II | 0.62 | 50.0 | 3.47e-01 | 100.0% | 79.5% |
| 4586179 | 2485.1.1.56 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Rng_hyd_C | 0.62 | 53.0 | 4.02e-01 | 100.0% | 65.4% |
| 3998421 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.61 | 47.0 | 4.47e-01 | 88.5% | 81.5% |
| 3720463 | 2485.1.1.56 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Rng_hyd_C | 0.61 | 52.0 | 3.91e-01 | 100.0% | 58.5% |
| 4588819 | 4025.1.1.0 ↗ | alpha complex topology › alpha-helical domain in nickel-iron hydrogenase, large subunit › alpha-helical domain in nickel-iron hydrogenase, large subunit › alpha-helical domain in nickel-iron hydrogenase, large subunit | 0.61 | 48.0 | 3.00e-01 | 88.5% | 19.7% |
| 3990708 | 844.1.1.0 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain | 0.60 | 52.0 | 3.44e-01 | 98.1% | 61.2% |
| 3605319 | 5.1.4.238 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF7048 | 0.60 | 44.0 | 2.64e-01 | 80.8% | 11.7% |
| 3396736 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.60 | 45.0 | 4.31e-01 | 86.5% | 76.9% |
| 3424085 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.60 | 47.0 | 2.99e-01 | 96.2% | 25.0% |
| 5022420 | 281.1.1.1 ↗ | a+b three layers › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › Aldolase_II | 0.59 | 48.0 | 3.44e-01 | 100.0% | 89.7% |
| 3226288 | 2484.1.1.190 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FBA_2 | 0.59 | 48.0 | 3.20e-01 | 100.0% | 24.4% |
| 1835053 | 2485.1.1.56 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Rng_hyd_C | 0.59 | 50.0 | 4.02e-01 | 100.0% | 72.2% |
| 3476578 | 281.1.1.1 ↗ | a+b three layers › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › Aldolase_II | 0.58 | 48.0 | 3.21e-01 | 100.0% | 69.8% |
| 3956669 | 2484.1.1.124 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 | 0.58 | 46.0 | 3.20e-01 | 88.5% | 48.9% |
| 3609880 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.58 | 39.0 | 2.29e-01 | 71.2% | 66.5% |
| 3291339 | 2485.1.1.56 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Rng_hyd_C | 0.58 | 50.0 | 4.10e-01 | 100.0% | 83.0% |
| 3574882 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.57 | 41.0 | 3.12e-01 | 76.9% | 85.5% |
| 3586856 | 2004.1.1.514 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23, AAA_29, SbcC_Walker_B | 0.55 | 47.0 | 2.83e-01 | 98.1% | 16.5% |
| 5059099 | 241.2.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like | 0.54 | 47.0 | 3.99e-01 | 100.0% | 59.1% |
| 3235731 | 604.3.1.11 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › DUF155 | 0.53 | 42.0 | 2.93e-01 | 100.0% | 73.8% |
| 3709736 | 5.1.4.238 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF7048 | 0.53 | 42.0 | 2.63e-01 | 100.0% | 24.4% |
| 4969228 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.52 | 40.0 | 3.33e-01 | 94.2% | 69.1% |
| 3835133 | 304.112.1.2 ↗ | a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain | 0.51 | 43.0 | 2.97e-01 | 96.2% | 29.5% |