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IMGVR_UViG_3300014886_000026-3300014886-Ga0180300_100000182

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300014886_000026-3300014886-Ga0180300_100000182 ↗
Kingdom:: archaea

Quality

76.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 3-71

PDB

Domain cluster: representative

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5fgmA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.68	47.0	4.80e-01	94.2%	75.4%
3vfzB00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.67	48.0	5.01e-01	89.9%	82.5%
1au7A01	1.10.260.40	Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains	0.62	41.0	4.06e-01	79.7%	65.3%
1txgA02	1.10.1040.10	Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2	0.62	49.0	3.86e-01	89.9%	55.5%
2vwaA00	1.20.58.1330	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Plasmodium falciparum UIS3 membrane protein	0.62	49.0	4.46e-01	91.3%	80.8%
1ohcA02	3.90.190.10	Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily	0.56	48.0	3.68e-01	98.6%	56.2%
6dtuA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.54	45.0	3.44e-01	100.0%	87.0%

ECOD (16)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3604531	605.1.1.0 ↗	alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase	0.86	70.0	5.53e-01	84.1%	46.4%
3941666	101.1.3.0 ↗	alpha arrays › HTH › HTH › tetra-helical, LuxR-like	0.79	59.0	5.81e-01	82.6%	74.3%
3987150	101.1.1.382 ↗	alpha arrays › HTH › HTH › Three-helical HTH › DDE_Tnp_IS66	0.78	54.0	6.21e-01	79.7%	100.0%
3946360	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.75	61.0	6.26e-01	89.9%	92.3%
3198858	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.74	57.0	5.71e-01	87.0%	81.4%
3984597	101.1.2.488 ↗	alpha arrays › HTH › HTH › winged helix domain › DDE_Tnp_IS66	0.68	58.0	5.36e-01	95.7%	72.2%
3362936	101.1.1.276 ↗	alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding, Myb_DNA-bind_6	0.68	57.0	5.47e-01	92.8%	78.8%
3793542	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.67	49.0	5.19e-01	79.7%	91.7%
3890613	101.1.2.698 ↗	alpha arrays › HTH › HTH › winged helix domain › PF27079	0.66	49.0	5.08e-01	87.0%	84.6%
3617137	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.66	49.0	5.30e-01	79.7%	100.0%
3881313	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.65	48.0	4.92e-01	85.5%	83.1%
2491473	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.62	49.0	4.52e-01	97.1%	65.9%
None	—		0.59	41.0	2.65e-01	72.5%	16.7%
3233735	101.1.1.264 ↗	alpha arrays › HTH › HTH › Three-helical HTH › SPK	0.57	47.0	4.55e-01	97.1%	92.5%
3493459	101.1.2.90 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_9	0.56	44.0	4.23e-01	91.3%	81.2%
3630689	108.1.1.103 ↗	alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6, EF-hand_7, EF-hand_8	0.55	39.0	3.61e-01	73.9%	61.1%