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IMGVR_UViG_3300014886_000026-3300014886-Ga0180300_1000001824
Arc-VirIMGVR_UViG_3300014886_000026-3300014886-Ga0180300_1000001824
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-122
Domain cluster:
representative
Pfam (2)
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1k28D03 | 2.40.30.150 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 | 0.71 | 53.0 | 5.80e-01 | 93.2% | 94.7% |
| 3eaaA00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.71 | 65.0 | 5.80e-01 | 100.0% | 82.7% |
| 4w64B00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.69 | 63.0 | 5.64e-01 | 99.1% | 83.1% |
| 1y12B00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.69 | 63.0 | 5.68e-01 | 100.0% | 81.4% |
| 2q9kA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.68 | 52.0 | 4.84e-01 | 100.0% | 64.6% |
| 2k4qA00 | 4.10.410.40 | Few Secondary Structures › Irregular › Factor Xa Inhibitor › | 0.67 | 60.0 | 5.44e-01 | 96.6% | 88.5% |
| 4hkhA00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.66 | 60.0 | 5.56e-01 | 100.0% | 89.3% |
| 3he1A00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.64 | 59.0 | 5.46e-01 | 100.0% | 89.1% |
| 2ca9A02 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.63 | 35.0 | 3.92e-01 | 82.1% | 69.7% |
| 4divV01 | 2.40.30.200 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.63 | 55.0 | 5.31e-01 | 99.1% | 94.2% |
| 5yppA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.60 | 31.0 | 3.46e-01 | 80.3% | 63.3% |
| 2asfA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.59 | 51.0 | 5.01e-01 | 100.0% | 87.2% |
| 4lfhD02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 33.0 | 3.73e-01 | 88.9% | 74.1% |
| 2jn9A01 | 2.40.30.80 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › YkvR-like | 0.58 | 43.0 | 4.73e-01 | 96.6% | 100.0% |
| 1rz1A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 53.0 | 4.83e-01 | 100.0% | 79.6% |
| 2ptfA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 52.0 | 4.82e-01 | 100.0% | 82.3% |
| 2ausC02 | 3.30.2350.10 | Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase | 0.57 | 39.0 | 3.31e-01 | 82.1% | 42.7% |
| 3q0bX00 | 2.30.280.10 | Mainly Beta › Roll › PUA domain-like › SRA-YDG | 0.55 | 49.0 | 4.60e-01 | 98.3% | 79.1% |
| 2x7fC01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.54 | 36.0 | 3.91e-01 | 95.7% | 84.0% |
| 2pb7A01 | 2.30.280.10 | Mainly Beta › Roll › PUA domain-like › SRA-YDG | 0.54 | 48.0 | 4.16e-01 | 98.3% | 76.3% |
| 2gjvA00 | 3.30.2000.10 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Phage tail protein-like | 0.53 | 45.0 | 4.36e-01 | 96.6% | 91.2% |
| 3aj7A03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.52 | 30.0 | 3.63e-01 | 97.4% | 87.0% |
| 4dn9B00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 28.0 | 3.08e-01 | 79.5% | 62.9% |
| 3kg0A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 30.0 | 3.27e-01 | 79.5% | 70.1% |
| 3bp6B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 35.0 | 3.96e-01 | 88.0% | 96.6% |
ECOD (66)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4929634 | 1.1.5.47 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube_2 | 0.81 | 76.0 | 5.69e-01 | 100.0% | 59.3% |
| 4954552 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.81 | 76.0 | 6.75e-01 | 100.0% | 95.0% |
| 4960006 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.78 | 65.0 | 6.70e-01 | 100.0% | 92.7% |
| 4957560 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.78 | 72.0 | 6.93e-01 | 100.0% | 99.2% |
| 5003885 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.77 | 71.0 | 6.60e-01 | 100.0% | 90.3% |
| 2642579 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.77 | 70.0 | 6.81e-01 | 100.0% | 96.2% |
| 3966429 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.75 | 56.0 | 6.28e-01 | 94.0% | 100.0% |
| 3972305 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.75 | 56.0 | 6.26e-01 | 94.0% | 100.0% |
| 3964955 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.75 | 69.0 | 6.20e-01 | 100.0% | 98.8% |
| 2595159 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.75 | 68.0 | 6.07e-01 | 100.0% | 81.3% |
| 4952909 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.75 | 55.0 | 5.82e-01 | 100.0% | 85.7% |
| 2832216 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.75 | 69.0 | 6.28e-01 | 100.0% | 93.5% |
| 2674670 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.74 | 68.0 | 5.99e-01 | 100.0% | 76.7% |
| 3942828 | 1.1.13.39 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › KPP10_Orf10 | 0.74 | 68.0 | 6.29e-01 | 100.0% | 93.8% |
| 4393593 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.73 | 56.0 | 6.21e-01 | 96.6% | 98.9% |
| 5082881 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.73 | 66.0 | 6.49e-01 | 99.1% | 100.0% |
| 3502370 | 1.1.5.47 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube_2 | 0.73 | 67.0 | 6.02e-01 | 100.0% | 90.6% |
| 3967435 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.73 | 54.0 | 5.98e-01 | 95.7% | 95.8% |
| 3976188 | 1.1.13.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tube | 0.72 | 66.0 | 5.88e-01 | 100.0% | 78.8% |
| 4988100 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.72 | 65.0 | 6.39e-01 | 98.3% | 98.4% |
| 4157825 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.72 | 66.0 | 6.42e-01 | 100.0% | 97.7% |
| 5078836 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.72 | 63.0 | 6.50e-01 | 100.0% | 98.2% |
| 3966280 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.72 | 54.0 | 5.91e-01 | 95.7% | 95.8% |
| 4947204 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.72 | 66.0 | 6.55e-01 | 100.0% | 95.0% |
| 3590380 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.72 | 65.0 | 5.64e-01 | 100.0% | 83.3% |
| 4929752 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.71 | 65.0 | 5.91e-01 | 100.0% | 83.9% |
| 2101633 | 1.1.13.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tube | 0.71 | 64.0 | 5.72e-01 | 100.0% | 76.6% |
| 4988103 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.71 | 54.0 | 5.88e-01 | 94.9% | 97.9% |
| 80 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.71 | 64.0 | 5.79e-01 | 100.0% | 82.5% |
| 4982153 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.70 | 64.0 | 4.83e-01 | 99.1% | 49.3% |
| 4954561 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.69 | 61.0 | 5.89e-01 | 97.4% | 100.0% |
| 1563850 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.69 | 63.0 | 5.64e-01 | 99.1% | 83.1% |
| 4988102 | 1.1.13.47 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Dit_like | 0.69 | 60.0 | 6.20e-01 | 96.6% | 100.0% |
| 4514734 | 1.1.13.42 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Tail_tube | 0.69 | 60.0 | 6.15e-01 | 99.1% | 99.1% |
| 4247994 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.69 | 56.0 | 6.02e-01 | 94.0% | 100.0% |
| 3977123 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.69 | 63.0 | 5.63e-01 | 100.0% | 83.1% |
| 4954551 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.69 | 64.0 | 6.07e-01 | 100.0% | 90.4% |
| 3969384 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.68 | 62.0 | 5.61e-01 | 100.0% | 85.6% |
| 164720 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.68 | 52.0 | 4.84e-01 | 100.0% | 64.6% |
| 4009489 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.67 | 62.0 | 5.62e-01 | 100.0% | 87.7% |
| 3058416 | 1.1.5.39 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › TssD | 0.67 | 60.0 | 5.91e-01 | 100.0% | 90.6% |
| 3264744 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.67 | 61.0 | 5.31e-01 | 99.1% | 82.3% |
| 3265120 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.67 | 61.0 | 5.28e-01 | 99.1% | 82.3% |
| 2468519 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.66 | 54.0 | 5.75e-01 | 94.9% | 100.0% |
| 4034209 | 1.1.13.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail | 0.65 | 57.0 | 5.49e-01 | 96.6% | 100.0% |
| 3059162 | 1.1.13.30 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › E217_GP41 | 0.65 | 59.0 | 5.79e-01 | 97.4% | 96.8% |
| 5079559 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.64 | 58.0 | 5.92e-01 | 98.3% | 99.1% |
| 5004559 | 1.1.13.75 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › CIS_tube | 0.64 | 55.0 | 5.26e-01 | 92.3% | 100.0% |
| 4033579 | 1.1.13.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail | 0.64 | 55.0 | 5.38e-01 | 94.0% | 100.0% |
| 4810019 | 1.1.13.57 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF30637 | 0.62 | 50.0 | 5.14e-01 | 94.9% | 90.9% |
| 3164699 | 1.1.13.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DNA_circ_N | 0.62 | 54.0 | 5.45e-01 | 97.4% | 99.1% |
| 4952429 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.61 | 48.0 | 5.12e-01 | 96.6% | 98.0% |
| 3965192 | 1.1.13.67 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF2460 | 0.61 | 52.0 | 5.26e-01 | 92.3% | 99.1% |
| 4809346 | 1.1.13.57 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF30637 | 0.61 | 43.0 | 4.91e-01 | 86.3% | 100.0% |
| 4952629 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.61 | 48.0 | 5.06e-01 | 98.3% | 99.0% |
| 4888732 | 1.1.13.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail | 0.60 | 53.0 | 4.89e-01 | 100.0% | 82.1% |
| 4952430 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.60 | 47.0 | 4.89e-01 | 99.1% | 90.9% |
| 184986 | 1.1.13.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail | 0.59 | 51.0 | 5.05e-01 | 99.1% | 99.2% |
| 3921212 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.58 | 36.0 | 3.81e-01 | 88.9% | 71.0% |
| 3408311 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 34.0 | 3.62e-01 | 99.1% | 68.0% |
| 5006527 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 41.0 | 4.15e-01 | 90.6% | 76.7% |
| 4330265 | 304.107.1.3 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › TrmE_N | 0.53 | 37.0 | 3.81e-01 | 88.0% | 73.9% |
| 5454 | 304.124.1.2 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › Gp37 | 0.53 | 45.0 | 4.39e-01 | 96.6% | 92.5% |
| 3611407 | 306.10.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › H1 domain of KCTD12 › H1 domain of KCTD12 | 0.52 | 34.0 | 3.31e-01 | 86.3% | 57.8% |
| 4379611 | 304.102.1.6 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,TruB_C_2 | 0.52 | 40.0 | 3.30e-01 | 83.8% | 62.6% |
| 4454809 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.50 | 36.0 | 3.57e-01 | 88.9% | 72.5% |