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IMGVR_UViG_3300014886_000103-3300014886-Ga0180300_100012051
Arc-VirIMGVR_UViG_3300014886_000103-3300014886-Ga0180300_100012051
Identity
- Kingdom:
- archaea
Quality
93.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 15-197
Domain cluster:
rep: MK613348.1__QBQ72741.1__CRP6_gp17__00017__D2-169
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2py5A01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.77 | 72.0 | 7.23e-01 | 97.3% | 98.9% |
| 2f96A00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.65 | 62.0 | 5.99e-01 | 100.0% | 98.0% |
| 4qozB02 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.64 | 60.0 | 5.60e-01 | 98.9% | 84.7% |
| 5f7pA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.59 | 39.0 | 4.70e-01 | 96.7% | 99.2% |
| 4p78C00 | 3.30.920.30 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. | 0.59 | 19.0 | 3.17e-01 | 75.4% | 78.8% |
| 3vglA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.57 | 41.0 | 4.65e-01 | 96.2% | 96.4% |
| 1yvuA04 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.55 | 47.0 | 4.51e-01 | 91.3% | 100.0% |
| 1f21A00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.54 | 40.0 | 4.36e-01 | 85.8% | 91.4% |
| 1ebdA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 27.0 | 3.27e-01 | 95.6% | 72.7% |
| 3hcwA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 34.0 | 3.84e-01 | 71.6% | 83.2% |
| 6ywnA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.52 | 30.0 | 3.80e-01 | 91.8% | 95.4% |
| 3hrdC02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.52 | 32.0 | 4.03e-01 | 94.5% | 100.0% |
| 3p8aA02 | 2.60.40.4320 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 26.0 | 3.47e-01 | 78.7% | 97.8% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3230422 | 304.48.1.17 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B_2 | 0.86 | 83.0 | 5.98e-01 | 100.0% | 54.7% |
| 4428763 | 2484.1.1.36 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_2 | 0.84 | 80.0 | 7.21e-01 | 100.0% | 95.8% |
| 3666591 | 2484.1.1.36 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_2 | 0.83 | 79.0 | 7.02e-01 | 100.0% | 87.2% |
| 4486407 | 2484.1.1.36 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_2 | 0.82 | 77.0 | 7.52e-01 | 97.3% | 95.4% |
| 3506686 | 2484.1.1.36 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_2 | 0.79 | 73.0 | 6.77e-01 | 96.2% | 87.7% |
| 3797773 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.75 | 71.0 | 5.94e-01 | 100.0% | 84.7% |
| 3954516 | 2484.1.1.144 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DEDD_Tnp_IS110 | 0.74 | 46.0 | 5.62e-01 | 94.5% | 95.0% |
| 3656569 | 2484.1.1.20 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 | 0.70 | 59.0 | 5.63e-01 | 97.8% | 77.1% |
| 3586413 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.69 | 31.0 | 3.65e-01 | 94.5% | 58.5% |
| 5059882 | 2484.1.1.177 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF2779 | 0.65 | 60.0 | 5.75e-01 | 100.0% | 98.1% |
| 140602 | 2484.1.1.8 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ROK | 0.62 | 40.0 | 4.87e-01 | 98.4% | 100.0% |
| 3587334 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.62 | 25.0 | 3.95e-01 | 95.1% | 97.1% |
| 3388339 | 7541.1.1.1 ↗ | a/b three-layered sandwiches › Molybdenum cofactor biosynthesis proteins › Molybdenum cofactor biosynthesis proteins › Molybdenum cofactor biosynthesis proteins › MoCF_biosynth | 0.60 | 41.0 | 4.42e-01 | 95.1% | 79.4% |
| 4173211 | 102.1.1.4 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › 5_3_exonuc | 0.60 | 45.0 | 3.67e-01 | 97.3% | 43.1% |
| 4323659 | 211.1.1.54 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › PF27226 | 0.57 | 30.0 | 3.98e-01 | 71.6% | 94.7% |
| 4032583 | 7541.1.1.1 ↗ | a/b three-layered sandwiches › Molybdenum cofactor biosynthesis proteins › Molybdenum cofactor biosynthesis proteins › Molybdenum cofactor biosynthesis proteins › MoCF_biosynth | 0.57 | 42.0 | 4.39e-01 | 96.7% | 81.2% |
| 4956896 | 7541.1.1.1 ↗ | a/b three-layered sandwiches › Molybdenum cofactor biosynthesis proteins › Molybdenum cofactor biosynthesis proteins › Molybdenum cofactor biosynthesis proteins › MoCF_biosynth | 0.57 | 41.0 | 4.28e-01 | 95.6% | 79.4% |
| 3425162 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.56 | 31.0 | 3.84e-01 | 94.5% | 90.5% |
| 3243957 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.55 | 41.0 | 4.33e-01 | 94.0% | 87.5% |
| 5043017 | 2006.1.3.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain | 0.54 | 35.0 | 4.21e-01 | 71.6% | 100.0% |
| 4259073 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.53 | 48.0 | 4.36e-01 | 96.2% | 76.2% |
| 3836840 | 2484.1.1.67 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 | 0.52 | 38.0 | 4.26e-01 | 86.3% | 95.2% |
| 3938027 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.52 | 30.0 | 3.45e-01 | 92.3% | 76.3% |
| 3398751 | 7541.1.1.1 ↗ | a/b three-layered sandwiches › Molybdenum cofactor biosynthesis proteins › Molybdenum cofactor biosynthesis proteins › Molybdenum cofactor biosynthesis proteins › MoCF_biosynth | 0.52 | 42.0 | 4.28e-01 | 98.4% | 88.0% |