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IMGVR_UViG_3300014887_000089-3300014887-Ga0180302_100046502
Arc-VirIMGVR_UViG_3300014887_000089-3300014887-Ga0180302_100046502
Identity
- Kingdom:
- archaea
Quality
81.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 13-80_156-203
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gksB01 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.72 | 50.0 | 4.65e-01 | 70.7% | 95.0% |
| 2ar1A00 | 3.10.590.10 | Alpha Beta › Roll › ph1033 like fold › ph1033 like domains | 0.70 | 60.0 | 5.39e-01 | 91.4% | 94.3% |
| 4rcjA01 | 3.10.590.10 | Alpha Beta › Roll › ph1033 like fold › ph1033 like domains | 0.70 | 59.0 | 5.46e-01 | 91.4% | 95.9% |
| 4rcmB00 | 3.10.590.10 | Alpha Beta › Roll › ph1033 like fold › ph1033 like domains | 0.69 | 58.0 | 5.27e-01 | 91.4% | 86.8% |
| 5dnoA00 | 3.10.590.10 | Alpha Beta › Roll › ph1033 like fold › ph1033 like domains | 0.69 | 59.0 | 5.24e-01 | 93.1% | 90.2% |
| 3cr8A01 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.66 | 46.0 | 4.31e-01 | 71.6% | 78.0% |
| 1fx0B01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.61 | 40.0 | 4.82e-01 | 92.2% | 100.0% |
| 2d5mA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.60 | 45.0 | 3.82e-01 | 77.6% | 74.3% |
| 4tkoB01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.58 | 42.0 | 4.61e-01 | 80.2% | 94.6% |
| 2o95B00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.52 | 34.0 | 2.94e-01 | 88.8% | 42.6% |
| 3bbyA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.51 | 23.0 | 2.97e-01 | 82.8% | 71.9% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3179030 | 1.1.9.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › EVE | 0.73 | 61.0 | 5.33e-01 | 90.5% | 97.7% |
| 4934245 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.69 | 59.0 | 5.28e-01 | 91.4% | 98.8% |
| 5001719 | 1.1.9.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF28530 | 0.68 | 58.0 | 5.88e-01 | 92.2% | 99.1% |
| 4966648 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.63 | 55.0 | 5.12e-01 | 94.8% | 80.7% |
| 3996993 | 872.1.1.6 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › TIL_2 | 0.53 | 24.0 | 3.14e-01 | 70.7% | 78.3% |
| 3955634 | 4052.1.1.0 ↗ | beta complex topology › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like | 0.52 | 32.0 | 3.63e-01 | 78.4% | 87.5% |
D2
medium
residues 81-155_204-229
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3vn5A01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.58 | 37.0 | 4.41e-01 | 70.3% | 95.7% |
| 4noiA01 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.52 | 36.0 | 3.60e-01 | 70.3% | 93.2% |
| 4ushA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 34.0 | 3.41e-01 | 74.3% | 65.0% |
| 4ozjA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 34.0 | 3.41e-01 | 83.2% | 64.4% |
| 2it1A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 25.0 | 2.96e-01 | 80.2% | 68.9% |
| 1zylA01 | 3.30.200.70 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › | 0.51 | 26.0 | 3.00e-01 | 80.2% | 64.3% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4023642 | 3124.1.1.1 ↗ | beta sandwiches › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › NAC | 0.56 | 37.0 | 4.27e-01 | 96.0% | 98.6% |
| 5028935 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.53 | 30.0 | 3.46e-01 | 81.2% | 78.6% |
| 4260517 | 243.18.1.0 ↗ | a+b two layers › Cystatin-like › Maltokinase N-terminal domain › Maltokinase N-terminal domain | 0.51 | 42.0 | 2.77e-01 | 90.1% | 88.1% |
| 5014579 | 3696.1.1.0 ↗ | a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related | 0.50 | 29.0 | 3.29e-01 | 74.3% | 76.0% |