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IMGVR_UViG_3300014911_000395-3300014911-Ga0180301_1000015425

Arc-Vir

IMGVR_UViG_3300014911_000395-3300014911-Ga0180301_1000015425

Quality

69.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 4-76
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF07282.19 best Cas12f1-like_TNB 34.5 2.50e-08 65.8% 48.3%
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7dd9A01 3.20.110.10 Alpha Beta › Alpha-Beta Barrel › 7-stranded beta/alpha barrel › Glycoside hydrolase 38, N terminal domain 0.58 45.0 3.03e-01 83.6% 59.0%
3gi8C00 1.20.1740.10 Mainly Alpha › Up-down Bundle › Amino acid/polyamine transporter I › Amino acid/polyamine transporter I 0.53 45.0 2.89e-01 100.0% 71.3%
2r7aA02 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.50 42.0 3.47e-01 94.5% 83.6%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4934057 2484.1.1.124 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 0.71 63.0 5.03e-01 100.0% 50.7%
3943676 3355.1.1.0 alpha complex topology › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter 0.57 45.0 2.85e-01 90.4% 28.2%
3713657 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.55 34.0 2.63e-01 89.0% 26.5%
3638382 101.38.1.0 alpha arrays › HTH › DNA-binding domain of the replication initiator protein ColE2-Rep › DNA-binding domain of the replication initiator protein ColE2-Rep 0.52 40.0 3.18e-01 89.0% 97.6%