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IMGVR_UViG_3300014911_000395-3300014911-Ga0180301_1000015452

Arc-Vir

IMGVR_UViG_3300014911_000395-3300014911-Ga0180301_1000015452

Identity

Kingdom:
archaea

Quality

86.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 14-108
PDB
Domain cluster: representative
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3am2A02 2.60.120.1050 Mainly Beta › Sandwich › Jelly Rolls › 0.75 43.0 4.03e-01 100.0% 46.2%
2qqkA02 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.72 39.0 3.71e-01 100.0% 44.3%
4h4nA00 2.60.40.3750 Mainly Beta › Sandwich › Immunoglobulin-like › 0.69 42.0 5.00e-01 100.0% 91.9%
2okxA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.65 40.0 3.31e-01 100.0% 33.9%
8hhvA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.63 42.0 3.87e-01 100.0% 53.3%
5hbaA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.62 41.0 3.73e-01 100.0% 48.9%
4msvA01 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.62 45.0 4.01e-01 98.9% 53.3%
2qfeA00 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.61 40.0 3.55e-01 100.0% 46.0%
4dzgA00 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.61 38.0 3.64e-01 100.0% 53.1%
7pjjA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.61 39.0 3.54e-01 100.0% 47.3%
3j4uH00 2.60.120.1110 Mainly Beta › Sandwich › Jelly Rolls › 0.60 43.0 3.78e-01 100.0% 50.7%
4liqE05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 44.0 4.41e-01 100.0% 75.0%
5ikuA01 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.60 36.0 3.50e-01 100.0% 52.9%
1yi9A02 2.60.120.230 Mainly Beta › Sandwich › Jelly Rolls › 0.59 37.0 3.34e-01 100.0% 43.8%
3m1hD00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.59 47.0 3.85e-01 100.0% 46.6%
4hsaF02 2.60.40.2150 Mainly Beta › Sandwich › Immunoglobulin-like › Interleukin-17 receptor A/B, fibronectin-III-like domain 2 0.59 42.0 4.08e-01 100.0% 67.6%
2c9aA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.59 40.0 3.42e-01 100.0% 42.0%
3nqhA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.58 47.0 4.10e-01 100.0% 59.6%
2id4A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 40.0 3.50e-01 100.0% 49.3%
3demA03 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.57 35.0 3.32e-01 100.0% 50.9%
1g0dA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 39.0 3.89e-01 100.0% 70.1%
4ei0A01 2.60.40.3550 Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4466 0.55 37.0 3.33e-01 100.0% 46.8%
5m59A06 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.55 43.0 4.13e-01 100.0% 73.2%
2kzbA00 2.60.40.2830 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 37.0 3.54e-01 100.0% 59.6%
5lwxA03 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.53 44.0 3.29e-01 97.9% 38.3%
2bgoA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 33.0 3.18e-01 98.9% 51.7%
4a5wA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 40.0 3.96e-01 100.0% 74.3%
4gioA00 2.60.40.3230 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 36.0 3.67e-01 100.0% 70.8%
3obaA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 47.0 4.25e-01 100.0% 74.6%
3jb4C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.52 40.0 3.04e-01 100.0% 33.2%
1cx1A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 36.0 3.14e-01 100.0% 45.1%
1tme300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.51 42.0 3.18e-01 100.0% 37.4%
4ll1C02 2.60.40.640 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 41.0 3.64e-01 100.0% 59.3%
2dpkA01 2.60.40.2030 Mainly Beta › Sandwich › Immunoglobulin-like › CalX-beta domain 0.51 41.0 3.83e-01 100.0% 70.0%
4kkpA01 2.60.40.3880 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 39.0 3.68e-01 100.0% 66.7%
1lnsA04 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.50 43.0 3.44e-01 100.0% 47.3%
3btxA00 2.60.120.590 Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like 0.50 39.0 3.16e-01 86.3% 91.7%
ECOD (40)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4014484 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.79 45.0 4.45e-01 100.0% 54.0%
5028186 10.1.2.183 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PPC 0.77 45.0 4.35e-01 100.0% 52.4%
3997705 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.74 42.0 4.10e-01 100.0% 51.4%
3486965 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.73 42.0 3.59e-01 100.0% 36.7%
4170992 10.32.1.19 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PPC 0.73 43.0 4.11e-01 100.0% 50.9%
3924594 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.73 43.0 4.32e-01 100.0% 58.9%
3413879 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.73 43.0 4.14e-01 100.0% 53.3%
5013355 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.71 41.0 4.34e-01 100.0% 63.5%
3946137 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.70 40.0 4.38e-01 100.0% 67.5%
3508607 10.32.1.41 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GOLD_2 0.69 48.0 4.18e-01 100.0% 48.9%
3213559 10.4.1.0 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.69 37.0 3.58e-01 100.0% 46.7%
3789651 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.68 46.0 4.42e-01 100.0% 60.9%
3926732 10.32.1.213 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF25883 0.67 48.0 4.13e-01 100.0% 47.3%
3791166 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.66 47.0 4.28e-01 100.0% 56.5%
5033781 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.65 38.0 3.30e-01 100.0% 36.6%
4403193 10.32.1.244 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF29989 0.65 42.0 3.94e-01 100.0% 53.4%
4148939 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.65 36.0 3.74e-01 100.0% 56.7%
3623050 10.32.1.213 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF25883 0.64 44.0 4.12e-01 100.0% 58.3%
3243381 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.63 41.0 3.44e-01 100.0% 39.2%
3231211 10.4.1.0 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.63 36.0 3.28e-01 100.0% 41.6%
3494637 10.40.1.1 ↗ beta sandwiches › jelly-roll › PHR domain › PHR domain › PHR 0.62 41.0 3.56e-01 96.8% 44.1%
3243464 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.61 39.0 3.40e-01 100.0% 43.6%
3912745 10.4.1.1 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.60 34.0 3.19e-01 100.0% 44.3%
1137419 10.2.1.57 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Bbp16 0.60 43.0 3.78e-01 100.0% 50.7%
4509186 10.32.1.8 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 0.58 44.0 3.59e-01 100.0% 44.1%
4888385 1116.1.1.4 ↗ a+b two layers › Polycystin-mucolipin domain › Polycystin-mucolipin domain › Polycystin-mucolipin domain › PLAT 0.58 40.0 3.70e-01 100.0% 54.8%
2595135 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.58 37.0 3.38e-01 98.9% 47.3%
3231215 10.4.1.1 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.55 38.0 3.46e-01 100.0% 53.6%
3243005 10.32.1.227 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Glycoprotein 0.55 32.0 2.90e-01 100.0% 39.3%
4999321 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 43.0 4.16e-01 100.0% 75.2%
3924093 10.4.1.33 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB_M02D8_5_3rd 0.54 31.0 2.94e-01 100.0% 44.2%
3934956 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.53 37.0 3.21e-01 100.0% 45.5%
3499689 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 41.0 4.16e-01 100.0% 83.2%
5039918 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.52 43.0 3.81e-01 100.0% 61.4%
3626930 10.4.1.1 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.52 32.0 2.81e-01 100.0% 40.0%
3497743 10.12.1.5 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PMI_typeI_C 0.51 36.0 3.12e-01 73.7% 96.1%
4026943 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.51 40.0 3.73e-01 100.0% 66.7%
3172709 11.1.1.60 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Vps26 0.51 44.0 3.63e-01 100.0% 63.2%
3409792 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.50 39.0 3.73e-01 100.0% 71.8%
5038901 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 42.0 3.89e-01 100.0% 72.5%