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IMGVR_UViG_3300014911_000429-3300014911-Ga0180301_100042856

Arc-Vir

IMGVR_UViG_3300014911_000429-3300014911-Ga0180301_100042856

Quality

82.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-60
PDB
Domain cluster: representative
CATH (59)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2kl8A00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.70 60.0 5.38e-01 100.0% 84.7%
2jfdA03 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.66 52.0 5.04e-01 100.0% 78.8%
2l48A00 3.30.70.2030 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.66 56.0 5.06e-01 100.0% 71.8%
2cveA02 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.66 56.0 5.47e-01 100.0% 92.4%
3ajdA01 3.30.70.1170 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 0.66 56.0 5.59e-01 100.0% 95.0%
3dfeA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.66 57.0 5.14e-01 100.0% 80.5%
1m0sA02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.65 56.0 5.28e-01 98.3% 88.9%
3tzyA02 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.65 52.0 4.99e-01 100.0% 77.1%
2vd3A03 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 55.0 5.17e-01 100.0% 82.4%
1whvA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.64 54.0 4.67e-01 100.0% 65.0%
2h1yA02 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.63 52.0 4.98e-01 100.0% 80.0%
7ahbB01 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.63 50.0 5.04e-01 100.0% 91.5%
3aqpA02 3.30.70.3220 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.63 52.0 3.96e-01 100.0% 41.2%
3rrkA03 3.30.70.2750 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.63 52.0 4.98e-01 100.0% 83.8%
2lqjA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.62 52.0 4.60e-01 100.0% 80.9%
7agpA01 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.62 51.0 5.12e-01 100.0% 91.8%
7veeA02 3.40.366.10 Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 0.62 50.0 3.20e-01 100.0% 17.1%
1s12A00 3.30.70.1490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp 0.61 53.0 4.63e-01 100.0% 86.2%
6le1A01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.61 50.0 4.80e-01 93.2% 94.1%
2fgcA03 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.61 50.0 4.73e-01 100.0% 77.6%
2kdoA03 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 49.0 4.58e-01 100.0% 76.2%
4wxjB01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.59 45.0 3.40e-01 83.1% 72.6%
3bpvA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 43.0 3.28e-01 79.7% 33.6%
4alzA01 3.30.1340.30 Alpha Beta › 2-Layer Sandwich › Histidine-containing Protein; Chain: A; › 0.59 47.0 4.69e-01 93.2% 90.3%
2hgcA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 42.0 3.83e-01 79.7% 56.4%
5huoE01 3.90.1170.20 Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › Quinolinate phosphoribosyl transferase, N-terminal domain 0.58 49.0 3.85e-01 100.0% 67.6%
6pcoC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 42.0 3.26e-01 78.0% 42.4%
2kt2A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 48.0 4.66e-01 100.0% 94.2%
3znuA00 3.30.70.1060 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel 0.58 47.0 4.22e-01 100.0% 80.9%
2hiyA01 3.30.70.1280 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › SP0830-like domains 0.58 47.0 4.30e-01 100.0% 78.4%
1yyvB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 43.0 3.56e-01 83.1% 57.1%
4hqeA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 43.0 3.52e-01 79.7% 46.7%
3im8A02 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.57 47.0 4.50e-01 100.0% 82.2%
5dymA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 40.0 3.50e-01 76.3% 69.8%
4la9A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.57 42.0 3.32e-01 81.4% 72.3%
4rr5A02 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.57 44.0 4.34e-01 100.0% 84.4%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 42.0 3.55e-01 81.4% 61.0%
3icaB00 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.56 46.0 3.25e-01 94.9% 96.6%
5lf5A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 47.0 3.87e-01 100.0% 82.8%
2a1vA00 3.90.1150.30 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.55 43.0 3.44e-01 96.6% 39.1%
8gz3B01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.55 43.0 3.88e-01 94.9% 75.3%
3m3kA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.54 42.0 3.26e-01 86.4% 71.9%
5e1wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 43.0 3.17e-01 89.8% 61.9%
4ga6A04 3.90.1170.30 Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › Pyrimidine nucleoside phosphorylase-like, C-terminal domain 0.54 43.0 4.03e-01 96.6% 91.4%
2uv8A06 3.30.70.2490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 37.0 3.65e-01 81.4% 65.7%
2aw4Z00 4.10.830.30 Few Secondary Structures › Irregular › 30s Ribosomal Protein S14; Chain N › Ribosomal protein L31 0.54 30.0 2.84e-01 94.9% 40.0%
2dgkA02 3.90.1150.160 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.54 41.0 3.60e-01 93.2% 64.5%
2bm0A03 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.53 37.0 3.82e-01 78.0% 88.2%
4ykiA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.53 43.0 3.27e-01 91.5% 83.7%
2jr1A01 3.30.160.510 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Histone-like nucleoid-structuring protein H-NS 0.53 30.0 2.99e-01 93.2% 46.9%
2nyxB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 41.0 3.16e-01 88.1% 64.8%
3mz1B01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.52 40.0 3.34e-01 84.7% 86.8%
7jgsG02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 38.0 3.34e-01 83.1% 78.6%
2gmhA03 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 42.0 3.76e-01 100.0% 68.8%
7dvrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 39.0 3.07e-01 86.4% 75.9%
3hhfA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.51 38.0 3.38e-01 88.1% 88.1%
4zudA01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.51 44.0 2.87e-01 96.6% 51.2%
2pvuA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.51 36.0 3.02e-01 81.4% 70.7%
4gr4C02 3.40.50.12780 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain 0.50 36.0 2.31e-01 83.1% 38.5%
ECOD (76)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5023825 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.67 57.0 5.61e-01 100.0% 92.1%
4965210 304.163.1.0 a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain 0.66 48.0 4.82e-01 100.0% 78.3%
3959690 304.11.1.0 a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.66 54.0 4.84e-01 100.0% 64.7%
3838308 304.7.1.0 a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors 0.66 56.0 5.46e-01 100.0% 90.8%
4997352 304.5.1.5 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › HisG_C 0.65 55.0 5.02e-01 100.0% 71.1%
4959923 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.65 55.0 5.28e-01 100.0% 92.9%
3286891 304.11.1.0 a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.65 53.0 5.32e-01 100.0% 91.7%
3248903 304.11.1.0 a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.64 53.0 5.16e-01 100.0% 84.6%
4554827 304.11.1.1 a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Acyl_transf_1 0.64 51.0 4.92e-01 100.0% 77.1%
4032410 304.24.1.2 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › DUF1949 0.64 55.0 5.04e-01 100.0% 76.2%
3257902 304.11.1.0 a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.64 52.0 4.61e-01 100.0% 61.1%
4023193 304.11.1.0 a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.64 52.0 5.11e-01 100.0% 86.2%
4931287 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.64 54.0 5.30e-01 98.3% 90.8%
4263279 304.11.1.0 a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.64 52.0 4.68e-01 100.0% 64.7%
4938102 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.64 53.0 5.15e-01 100.0% 90.0%
1833373 304.11.1.0 a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.63 52.0 5.02e-01 100.0% 82.4%
3390426 304.163.1.1 a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › R1_ABCA1 0.63 52.0 4.54e-01 100.0% 69.0%
4153244 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.63 52.0 5.03e-01 100.0% 91.4%
3959820 304.11.1.0 a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.63 51.0 4.51e-01 100.0% 61.1%
3213315 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.62 52.0 4.80e-01 100.0% 96.2%
3565650 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.61 51.0 4.59e-01 100.0% 70.0%
3857666 304.120.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI 0.61 52.0 4.69e-01 100.0% 95.3%
4647263 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.61 51.0 4.74e-01 100.0% 84.6%
5023775 2.1.1.374 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF2110_C 0.61 51.0 3.72e-01 100.0% 34.6%
5051914 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.61 52.0 4.96e-01 100.0% 85.7%
4012870 304.11.1.0 a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.61 50.0 4.84e-01 100.0% 81.4%
3948968 7523.1.1.4 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_3 0.61 45.0 3.58e-01 81.4% 73.6%
4450659 304.11.1.0 a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.61 50.0 4.79e-01 100.0% 81.4%
5066414 304.5.1.0 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.60 50.0 4.68e-01 100.0% 77.5%
4029363 304.20.1.2 a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › Nrap_D3 0.60 51.0 3.86e-01 100.0% 88.1%
5004165 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.60 49.0 4.73e-01 100.0% 80.0%
5044202 304.164.1.0 a+b two layers › Alpha-beta plaits › Hypothetical protein NegoA.19184.a C-terminal domain › Hypothetical protein NegoA.19184.a C-terminal domain 0.60 48.0 4.67e-01 100.0% 80.0%
5045691 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.60 50.0 4.85e-01 100.0% 84.3%
5025450 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.60 49.0 4.86e-01 100.0% 90.8%
4226339 304.11.1.0 a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.60 51.0 4.86e-01 100.0% 84.3%
4973712 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.60 50.0 4.82e-01 100.0% 84.3%
4999908 3501.1.1.0 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 0.59 48.0 4.69e-01 93.2% 93.8%
3970823 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.59 48.0 4.38e-01 100.0% 82.2%
4646775 304.11.1.0 a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.59 49.0 4.61e-01 100.0% 77.3%
4930385 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.59 48.0 4.60e-01 100.0% 82.7%
4031138 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.59 46.0 4.63e-01 91.5% 100.0%
3446714 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.59 45.0 4.45e-01 93.2% 81.5%
5066457 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.58 48.0 4.76e-01 100.0% 90.8%
5076521 101.1.2.54 alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.58 40.0 3.18e-01 72.9% 44.6%
3287011 304.11.1.0 a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.58 49.0 4.74e-01 100.0% 84.3%
4981249 314.1.1.7 a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › AsnA 0.58 45.0 2.89e-01 91.5% 80.8%
5029922 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.58 40.0 3.60e-01 72.9% 71.8%
4965874 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.58 44.0 3.40e-01 83.1% 53.7%
3512964 304.120.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI 0.58 47.0 3.91e-01 98.3% 95.0%
4480479 304.11.1.0 a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.58 47.0 4.58e-01 100.0% 82.9%
None 0.58 44.0 3.23e-01 86.4% 71.0%
5052827 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.58 48.0 4.62e-01 100.0% 85.7%
5078945 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.57 44.0 4.32e-01 88.1% 95.4%
5082818 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.57 48.0 4.60e-01 100.0% 84.3%
3386827 304.8.1.3 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NapD 0.57 47.0 4.17e-01 100.0% 67.4%
3979999 101.1.2.274 alpha arrays › HTH › HTH › winged helix domain › SgrR_N 0.57 43.0 3.54e-01 83.1% 45.7%
5005196 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 42.0 3.89e-01 83.1% 82.5%
4150026 314.1.1.9 a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His 0.57 44.0 2.89e-01 93.2% 82.5%
3286591 101.1.2.612 alpha arrays › HTH › HTH › winged helix domain › MarR_2, PF27059 0.57 42.0 3.24e-01 83.1% 49.0%
4674912 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 42.0 3.68e-01 83.1% 82.1%
4126322 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.56 45.0 4.45e-01 93.2% 84.6%
4944201 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.56 46.0 4.43e-01 100.0% 91.4%
5047263 304.24.1.3 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_III 0.56 46.0 4.36e-01 100.0% 88.0%
5071118 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.56 46.0 4.57e-01 100.0% 93.8%
5062182 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.56 46.0 4.50e-01 100.0% 87.7%
3272247 242.1.1.1 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.56 42.0 3.29e-01 86.4% 40.7%
4928669 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.56 44.0 3.81e-01 93.2% 81.9%
4985599 304.117.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC 0.56 45.0 4.40e-01 100.0% 87.1%
3685955 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.55 44.0 4.02e-01 93.2% 77.6%
4093790 304.28.1.2 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › Sec_GG 0.55 44.0 4.08e-01 100.0% 87.1%
4025722 3156.3.1.2 beta sandwiches › Cupredoxin-like › Surface antigen 1 (SAG1)-related-sequence (SRS) family › Surface antigen 1 (SAG1)-related-sequence (SRS) family › s48_45 0.53 44.0 3.57e-01 100.0% 74.6%
2127864 325.1.1.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › CO dehydrogenase molybdoprotein N-domain-like 0.53 40.0 4.10e-01 89.8% 89.8%
3903882 5001.1.1.1 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.52 43.0 2.77e-01 96.6% 48.1%
5057396 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.52 41.0 3.93e-01 100.0% 81.3%
None 0.51 39.0 2.57e-01 91.5% 64.9%
None 0.50 42.0 2.76e-01 98.3% 59.3%
D2 high residues 65-145
PDB
Domain cluster: representative
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ltrA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.67 49.0 4.53e-01 77.8% 90.5%
7nn3B01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.66 55.0 3.72e-01 93.8% 42.1%
2nn5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.62 50.0 4.06e-01 92.6% 98.2%
1g29102 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 31.0 3.85e-01 86.4% 84.4%
1j3mA00 3.30.310.70 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TT1751-like domain 0.59 41.0 3.58e-01 71.6% 85.8%
2it1A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 32.0 3.56e-01 90.1% 70.5%
2yt4A03 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.57 39.0 3.63e-01 70.4% 66.3%
3ossC00 2.30.30.830 Mainly Beta › Roll › SH3 type barrels. › 0.57 42.0 4.62e-01 90.1% 98.5%
3rc2A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.57 52.0 3.91e-01 100.0% 87.9%
1vbiA02 3.30.1370.60 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Malate/L-lactate/L-sulpholactate dehydrogenase, NADPH binding domain 0.56 41.0 3.07e-01 81.5% 70.5%
6ruiB04 3.90.1110.10 Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 0.56 43.0 3.47e-01 87.7% 81.3%
1azpA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 41.0 4.46e-01 91.4% 95.5%
3ip3A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.55 49.0 3.68e-01 100.0% 86.2%
3bm4A00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.55 40.0 3.08e-01 79.0% 46.2%
1xmxA02 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.55 38.0 3.13e-01 72.8% 99.3%
2nykA01 3.30.500.30 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.53 43.0 3.59e-01 90.1% 67.6%
4ikcA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.53 45.0 3.16e-01 96.3% 70.1%
3k1lA01 3.30.457.40 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › 0.52 37.0 3.59e-01 76.5% 79.3%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.51 33.0 3.57e-01 81.5% 80.0%
1nijA02 3.30.1220.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Yjia; Chain: A;domain 2 › CobW-like, C-terminal domain 0.51 32.0 2.89e-01 97.5% 43.1%
1sz2A02 3.40.367.20 Alpha Beta › 3-Layer(aba) Sandwich › Hexokinase; domain 1 › 0.51 38.0 2.88e-01 79.0% 86.0%
4htlA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.51 38.0 2.95e-01 79.0% 80.5%
7xr9E01 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.51 44.0 3.39e-01 100.0% 87.8%
3lxrF00 1.10.4120.20 Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › 0.51 42.0 3.35e-01 95.1% 90.6%
ECOD (38)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4935422 268.1.1.1 a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › SCP2 0.75 35.0 2.93e-01 84.0% 26.7%
5074905 268.1.1.0 a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related 0.75 37.0 3.32e-01 84.0% 35.5%
5014319 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 42.0 4.56e-01 95.1% 72.1%
3221928 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.67 43.0 2.92e-01 90.1% 19.3%
3931048 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.63 42.0 3.00e-01 96.3% 22.5%
3408369 284.1.3.4 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › CCTL2_WNK 0.61 50.0 5.18e-01 90.1% 100.0%
3549045 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.60 42.0 3.81e-01 71.6% 70.0%
3750184 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.60 42.0 4.38e-01 91.4% 78.7%
4945895 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.60 50.0 4.58e-01 91.4% 74.3%
3903260 109.4.1.2707 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PH_21 0.59 40.0 2.50e-01 88.9% 13.0%
3796352 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.57 38.0 4.15e-01 80.2% 84.6%
5051418 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.57 48.0 4.12e-01 96.3% 91.9%
3267918 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 37.0 4.33e-01 96.3% 98.2%
4998413 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 41.0 4.43e-01 88.9% 94.3%
3805156 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.54 39.0 3.62e-01 77.8% 81.8%
4995140 2484.1.1.124 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 0.54 40.0 3.38e-01 80.2% 100.0%
3216442 145.1.1.0 alpha arrays › F-box domain › F-box domain › F-box domain 0.54 48.0 3.57e-01 100.0% 51.4%
3696056 220.1.1.195 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_fung_RdRP 0.54 43.0 3.68e-01 92.6% 64.8%
3219284 2484.1.1.190 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FBA_2 0.53 45.0 3.11e-01 91.4% 29.1%
4958053 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.53 37.0 3.35e-01 72.8% 94.8%
5015408 4.8.1.50 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF749 0.53 42.0 4.08e-01 87.7% 96.7%
3602836 284.1.3.6 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › DUF749 0.53 44.0 4.12e-01 92.6% 91.0%
3222110 2484.1.1.162 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › F-box 0.53 46.0 3.78e-01 100.0% 74.8%
3918975 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.52 42.0 3.66e-01 87.7% 59.1%
3236279 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.52 46.0 3.12e-01 100.0% 26.9%
3479397 4292.2.1.0 a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain 0.52 39.0 3.58e-01 79.0% 69.5%
3235531 207.1.1.52 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FBA_2 0.52 44.0 3.08e-01 90.1% 30.4%
3211867 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 42.0 3.76e-01 88.9% 62.7%
3235619 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.52 46.0 3.06e-01 96.3% 34.1%
3289254 220.1.1.82 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_6 0.52 40.0 3.84e-01 82.7% 87.4%
4314504 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.52 43.0 3.70e-01 93.8% 88.9%
5066347 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.51 40.0 3.33e-01 85.2% 94.0%
3704544 220.1.1.12 beta barrels › PH domain-like › PH domain-like › PH domain-like › Myosin_TH1 0.51 44.0 3.60e-01 92.6% 58.6%
1291990 3884.1.1.0 a+b two layers › Immunity protein NMB0503 › Immunity protein NMB0503 › Immunity protein NMB0503 0.51 39.0 3.41e-01 85.2% 81.5%
3707415 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.51 39.0 3.00e-01 86.4% 49.3%
3709649 277.1.1.0 a+b two layers › PX domain › PX domain › PX domain 0.51 41.0 3.49e-01 87.7% 68.5%
3239842 207.1.1.52 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FBA_2 0.51 43.0 3.11e-01 92.6% 33.8%
3970639 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 42.0 3.79e-01 93.8% 66.4%
D3 high residues 150-253
PDB
CATH (32)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3cuqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 51.0 5.64e-01 91.3% 95.1%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 47.0 4.84e-01 96.2% 72.0%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 49.0 4.91e-01 96.2% 72.4%
3elkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 48.0 4.87e-01 96.2% 72.4%
2mlgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 44.0 5.03e-01 92.3% 88.3%
5h20A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 48.0 4.84e-01 96.2% 73.8%
7qssA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.67 47.0 3.85e-01 95.2% 39.9%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 46.0 4.91e-01 97.1% 83.7%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 42.0 4.28e-01 94.2% 67.3%
1kyzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 46.0 4.66e-01 96.2% 75.7%
2l2oA00 1.10.10.1540 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Costar domain 0.64 49.0 5.28e-01 97.1% 98.8%
2dqlA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 47.0 4.59e-01 97.1% 71.3%
1ulyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 42.0 4.48e-01 96.2% 79.8%
4g6qA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 42.0 4.51e-01 95.2% 82.8%
3c18A03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 34.0 4.32e-01 76.9% 100.0%
2eshA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 44.0 4.34e-01 96.2% 71.1%
2bv6A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 46.0 4.22e-01 97.1% 62.5%
1dq3A04 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.60 49.0 4.79e-01 100.0% 81.6%
3r0aA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 42.0 4.07e-01 95.2% 65.8%
3hyiA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.57 43.0 3.57e-01 99.0% 44.5%
3c0wA02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.57 47.0 4.77e-01 100.0% 92.2%
6lbsB01 3.30.1370.230 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Stn1, C-terminal wHTH domain 0.55 39.0 4.39e-01 89.4% 98.7%
1yirA00 3.20.140.10 Alpha Beta › Alpha-Beta Barrel › nicotinate phosphoribosyltransferase › nicotinate phosphoribosyltransferase 0.55 40.0 2.79e-01 78.8% 75.1%
4crsA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.54 42.0 3.86e-01 82.7% 77.6%
5c3vA01 3.30.800.10 Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol Phosphate Kinase II Beta › Phosphatidylinositol Phosphate Kinase II Beta 0.53 37.0 3.21e-01 74.0% 45.5%
6lxgA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.53 30.0 3.46e-01 80.8% 78.1%
1tuzA00 1.10.238.110 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Diacylglycerol kinase alpha. 0.52 40.0 3.92e-01 95.2% 73.7%
3dtnA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 33.0 2.80e-01 91.3% 35.8%
5mmjh01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.51 31.0 3.53e-01 89.4% 82.7%
5mmiU01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.51 38.0 4.14e-01 94.2% 100.0%
3gnlA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 36.0 3.14e-01 75.0% 95.2%
1i94H01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.50 33.0 3.71e-01 88.5% 89.7%
ECOD (71)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5042730 101.1.2.143 alpha arrays › HTH › HTH › winged helix domain › HTH_34 0.72 48.0 5.23e-01 95.2% 82.4%
3587554 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.72 50.0 5.10e-01 96.2% 74.0%
5075194 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 48.0 4.71e-01 95.2% 62.6%
5011597 101.1.2.143 alpha arrays › HTH › HTH › winged helix domain › HTH_34 0.72 48.0 4.99e-01 96.2% 72.7%
3602557 101.1.2.143 alpha arrays › HTH › HTH › winged helix domain › HTH_34 0.71 49.0 5.23e-01 96.2% 81.1%
4971941 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.71 48.0 5.43e-01 96.2% 94.7%
4975130 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.71 49.0 5.17e-01 94.2% 77.9%
5044327 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 50.0 5.12e-01 96.2% 76.0%
5064203 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 49.0 5.18e-01 96.2% 82.2%
4329890 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.70 47.0 4.20e-01 94.2% 48.0%
4983310 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.70 49.0 5.04e-01 97.1% 76.0%
4524417 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 49.0 5.12e-01 96.2% 79.8%
5025451 101.1.2.143 alpha arrays › HTH › HTH › winged helix domain › HTH_34 0.70 46.0 4.60e-01 96.2% 64.5%
3988732 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.69 49.0 4.87e-01 96.2% 70.4%
3458999 101.1.2.73 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82 0.69 48.0 4.99e-01 91.3% 77.9%
4946524 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 47.0 4.64e-01 95.2% 65.5%
5056451 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 47.0 5.01e-01 96.2% 80.9%
4926994 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.69 47.0 4.78e-01 97.1% 71.2%
4947503 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 49.0 4.26e-01 96.2% 48.8%
4978419 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.68 45.0 5.11e-01 94.2% 93.3%
4958024 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.68 50.0 5.20e-01 97.1% 84.2%
4593646 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 48.0 5.06e-01 95.2% 84.4%
5014176 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.68 49.0 4.26e-01 96.2% 49.4%
4940868 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.68 46.0 4.80e-01 96.2% 75.8%
4997255 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 50.0 5.10e-01 96.2% 81.0%
4948272 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.67 45.0 4.96e-01 92.3% 86.7%
4947062 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 48.0 5.06e-01 97.1% 83.2%
4957079 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.67 45.0 4.75e-01 93.3% 78.9%
5076041 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 50.0 4.77e-01 100.0% 68.3%
5008107 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.67 42.0 4.21e-01 90.4% 61.9%
5051882 101.1.2.143 alpha arrays › HTH › HTH › winged helix domain › HTH_34 0.67 45.0 4.50e-01 96.2% 66.4%
5042935 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.66 44.0 4.63e-01 93.3% 74.7%
5011620 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 45.0 4.80e-01 95.2% 81.1%
5039869 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.66 43.0 4.17e-01 95.2% 57.5%
5058268 101.1.2.54 alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.66 48.0 4.65e-01 95.2% 68.7%
3588406 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 41.0 4.82e-01 86.5% 100.0%
4979194 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 44.0 4.61e-01 96.2% 75.8%
4974951 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.65 47.0 4.90e-01 96.2% 82.1%
4947811 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 49.0 4.75e-01 100.0% 71.3%
4964272 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 42.0 4.28e-01 93.3% 65.7%
4999286 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.65 48.0 3.98e-01 95.2% 45.0%
4251909 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.64 42.0 4.57e-01 92.3% 81.2%
4966069 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 43.0 4.60e-01 92.3% 80.0%
4585912 101.1.2.603 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82, HTH_9 0.64 45.0 3.10e-01 94.2% 20.5%
4958040 101.1.2.896 alpha arrays › HTH › HTH › winged helix domain › DUF2551 0.64 46.0 4.84e-01 95.2% 83.2%
5071269 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.63 47.0 3.77e-01 95.2% 39.0%
4999532 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.63 50.0 3.80e-01 96.2% 37.4%
5000702 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 42.0 4.58e-01 96.2% 84.7%
5076521 101.1.2.54 alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.62 44.0 4.10e-01 96.2% 58.5%
4965203 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.62 44.0 4.40e-01 94.2% 71.3%
4993554 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 45.0 4.13e-01 97.1% 57.1%
5076142 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 47.0 4.89e-01 100.0% 89.5%
4996185 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 43.0 4.40e-01 96.2% 77.0%
5001098 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 44.0 4.68e-01 97.1% 90.0%
2898920 101.1.2.68 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 0.59 51.0 4.58e-01 96.2% 68.6%
4957834 101.1.2.920 alpha arrays › HTH › HTH › winged helix domain › HTH_TbsP_C 0.58 42.0 4.09e-01 96.2% 67.5%
3421785 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.58 44.0 4.13e-01 94.2% 65.4%
3206556 101.1.2.24 alpha arrays › HTH › HTH › winged helix domain › MAGE 0.56 51.0 3.83e-01 100.0% 51.2%
5056441 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.55 39.0 3.11e-01 74.0% 91.4%
4998593 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.54 39.0 3.78e-01 76.9% 67.8%
4961473 304.165.1.2 a+b two layers › Alpha-beta plaits › Uncharacterized protein Ta1207 › Uncharacterized protein Ta1207 › BAT 0.54 38.0 3.46e-01 96.2% 53.1%
3257174 101.1.2.148 alpha arrays › HTH › HTH › winged helix domain › ORC5_C 0.54 48.0 4.46e-01 100.0% 98.5%
4979990 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.54 42.0 3.99e-01 100.0% 69.2%
5009401 304.165.1.0 a+b two layers › Alpha-beta plaits › Uncharacterized protein Ta1207 › Uncharacterized protein Ta1207 0.54 41.0 3.83e-01 98.1% 63.7%
3616787 206.1.2.3 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › IPK 0.54 44.0 3.24e-01 88.5% 50.2%
3579401 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 33.0 3.47e-01 93.3% 67.4%
5043984 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.53 39.0 3.09e-01 78.8% 90.9%
4997166 3110.1.1.0 a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain 0.52 37.0 3.52e-01 74.0% 98.4%
3740460 101.1.2.113 alpha arrays › HTH › HTH › winged helix domain › RNase_H2-Ydr279 0.51 44.0 3.76e-01 96.2% 82.9%
3280725 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.51 40.0 3.60e-01 87.5% 98.7%
3725996 225.1.1.3 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c 0.50 41.0 3.30e-01 89.4% 93.0%