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IMGVR_UViG_3300014911_000466-3300014911-Ga0180301_1000081919
Arc-VirIMGVR_UViG_3300014911_000466-3300014911-Ga0180301_1000081919
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-70
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1mvfD00 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.78 | 52.0 | 5.88e-01 | 73.8% | 95.5% |
| 1yfbA00 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.75 | 49.0 | 5.23e-01 | 77.0% | 78.8% |
| 1ub4C00 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.67 | 51.0 | 4.80e-01 | 86.9% | 66.7% |
| 5mmiU01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.58 | 38.0 | 3.53e-01 | 70.5% | 51.2% |
| 1zcdA00 | 1.20.1530.10 | Mainly Alpha › Up-down Bundle › Na+/H+ antiporter like fold › Na+/H+ antiporter like domain | 0.57 | 42.0 | 2.65e-01 | 82.0% | 74.5% |
| 1wlfA01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.56 | 39.0 | 3.63e-01 | 77.0% | 90.5% |
| 4ga6A01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.54 | 39.0 | 3.56e-01 | 77.0% | 91.6% |
| 5mmjh01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.54 | 39.0 | 3.71e-01 | 78.7% | 94.7% |
| 4dg8A02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.54 | 39.0 | 3.52e-01 | 80.3% | 79.3% |
| 1vq8S00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.53 | 36.0 | 3.34e-01 | 72.1% | 82.7% |
| 2zihC00 | 1.10.3630.10 | Mainly Alpha › Orthogonal Bundle › yeast vps74-n-term truncation variant fold › yeast vps74-n-term truncation variant domain like | 0.52 | 38.0 | 2.51e-01 | 78.7% | 48.4% |
| 4y6iA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 37.0 | 3.27e-01 | 82.0% | 90.3% |
| 3o27B00 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.51 | 36.0 | 3.67e-01 | 82.0% | 80.7% |
| 3ng0A02 | 3.30.590.10 | Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › Glutamine synthetase/guanido kinase, catalytic domain | 0.51 | 38.0 | 2.46e-01 | 86.9% | 30.9% |
| 4exrA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 34.0 | 3.29e-01 | 70.5% | 62.0% |
| 3l9fA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 34.0 | 3.11e-01 | 73.8% | 92.1% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4937151 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.85 | 51.0 | 5.58e-01 | 78.7% | 74.0% |
| 4085449 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.80 | 55.0 | 5.14e-01 | 77.0% | 58.7% |
| 4933873 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.75 | 55.0 | 5.78e-01 | 78.7% | 87.3% |
| 5031005 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.73 | 50.0 | 5.20e-01 | 80.3% | 78.2% |
| 4993775 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.70 | 47.0 | 4.95e-01 | 78.7% | 78.2% |
| 3651303 | 304.109.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_L23 | 0.62 | 44.0 | 4.49e-01 | 86.9% | 80.0% |
| 3368713 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.62 | 45.0 | 4.32e-01 | 82.0% | 81.3% |
| 3984485 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.62 | 56.0 | 5.07e-01 | 100.0% | 92.5% |
| 3680527 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.61 | 44.0 | 4.20e-01 | 80.3% | 78.7% |
| 3423942 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.61 | 45.0 | 4.29e-01 | 83.6% | 82.7% |
| 3468691 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.59 | 38.0 | 3.44e-01 | 75.4% | 44.9% |
| 3622588 | 101.1.2.24 ↗ | alpha arrays › HTH › HTH › winged helix domain › MAGE | 0.58 | 43.0 | 2.99e-01 | 83.6% | 62.1% |
| 4964679 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.58 | 42.0 | 3.61e-01 | 80.3% | 91.4% |
| 5051923 | 304.8.1.12 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_8 | 0.55 | 34.0 | 3.50e-01 | 78.7% | 63.3% |
| 4124687 | 304.162.1.1 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH | 0.55 | 33.0 | 3.07e-01 | 83.6% | 48.0% |
| 3247481 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.52 | 35.0 | 3.57e-01 | 83.6% | 73.3% |
| 3703171 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.51 | 31.0 | 3.09e-01 | 80.3% | 55.4% |
| 2106290 | 304.109.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_L23 | 0.51 | 35.0 | 3.05e-01 | 73.8% | 69.3% |